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N1R_p28-like_protein
Euk-VirChoristoneura_biennis_entomopoxvirus
N1R_p28-like_protein__YP_008004322__Choristoneura_biennis_entomopoxvirus__10288
Identity
- Accession:
- YP_008004322 ↗
- Protein ID:
- N1R_p28-like_protein
- Kingdom:
- euk
Quality
77.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Choristoneura_biennis_entomopoxvirus
TaxID: 10288
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-77
D2
high
residues 262-400
Domain cluster:
rep: MTG-like_gene_family_protein__YP_009001723__Anomala_cuprea_entomopoxvirus__62099__D191-355
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13455.13 best | MUG113 | 33.8 | 5.90e-08 | 65.5% | 82.2% |
| PF10544.16 | T5orf172 | 51.0 | 2.40e-13 | 64.8% | 98.0% |
D3
high
residues 403-472
D4
medium
residues 78-150_188-259
Domain cluster:
rep: N1R_p28-like_protein__YP_008004623__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D80-201
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10553.15 best | MSV199 | 45.5 | 1.30e-11 | 51.7% | 47.7% |
| PF10553.15 | MSV199 | 35.6 | 1.40e-08 | 22.8% | 22.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8a1gC01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.60 | 43.0 | 3.98e-01 | 100.0% | 58.0% |
| 3l0iA01 | 1.20.120.1520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 42.0 | 3.94e-01 | 93.1% | 59.1% |
| 8i3jA01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.55 | 51.0 | 4.20e-01 | 100.0% | 79.7% |
| 6xj1A01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 48.0 | 3.93e-01 | 100.0% | 56.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3609611 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.66 | 43.0 | 4.46e-01 | 99.3% | 69.6% |
| 3699448 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 54.0 | 5.15e-01 | 100.0% | 81.2% |