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N1R_p28_family_protein

Euk-Vir

Penguinpox_virus

N1R_p28_family_protein__YP_009046144__Penguinpox_virus__648998

Identity

Accession:
YP_009046144 ↗
Protein ID:
N1R_p28_family_protein
Kingdom:
euk

Quality

71.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Avipoxvirus› Penguinpox_virus

TaxID: 648998

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-132
PDB
Domain cluster: rep: Kila-N_RING_finger_protein__YP_009408558__NY_014_poxvirus__2025360__D5-161
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04383.20 best KilA-N 83.5 1.30e-23 88.2% 96.3%
D2 high residues 141-191
PDB
D3 high residues 220-282
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF13920.13 zf-C3HC4_3 28.1 2.00e-06 61.9% 63.3%
PF12861.14 best zf-ANAPC11 30.3 4.90e-07 61.9% 49.2%
PF00097.32 zf-C3HC4 30.7 3.10e-07 49.2% 67.5%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2d8sA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 36.0 3.43e-01 100.0% 52.5%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3416822 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.90 74.0 6.78e-01 87.3% 73.8%
3240236 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.90 65.0 6.31e-01 100.0% 68.6%
3891072 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.90 77.0 6.62e-01 92.1% 65.3%
3412805 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.88 73.0 6.56e-01 88.9% 70.6%
3529744 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.86 79.0 6.18e-01 100.0% 71.2%
3809021 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 71.0 6.26e-01 90.5% 72.2%
3766928 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.85 78.0 6.11e-01 100.0% 71.8%
3906009 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 75.0 6.37e-01 96.8% 67.0%
3668278 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.84 73.0 5.67e-01 95.2% 52.3%
3622461 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.83 69.0 6.82e-01 88.9% 95.4%
3636256 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.80 71.0 6.22e-01 95.2% 82.2%
2875713 376.1.1.18 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-ANAPC11 0.79 61.0 4.94e-01 100.0% 45.6%
3182605 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.76 69.0 6.09e-01 100.0% 70.0%
3893740 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.76 52.0 4.28e-01 71.4% 41.8%
3533740 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.75 51.0 4.84e-01 71.4% 60.0%
4025222 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.75 50.0 4.43e-01 100.0% 48.9%
3517794 376.1.1.97 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RING_ZNF598 0.73 65.0 5.72e-01 100.0% 68.9%
3869891 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.66 45.0 4.21e-01 73.0% 73.8%
3321224 376.1.1.25 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UDP 0.60 45.0 4.48e-01 100.0% 78.5%