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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00042
Bact-VirN5_271_007G1_scaffold_5_prodigal-single.1__X__X__00042
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-110
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_4_curated_prodigal-single.1__X__X__00131__D93-200
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fqmA01 | 2.20.25.210 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B | 0.64 | 30.0 | 3.84e-01 | 99.1% | 77.0% |
| 2q18X01 | 3.10.330.40 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 37.0 | 4.48e-01 | 100.0% | 100.0% |
| 3qikA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 36.0 | 3.94e-01 | 89.0% | 83.3% |
| 2ojhA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 44.0 | 3.40e-01 | 98.2% | 98.6% |
| 2jsnA00 | 2.30.42.40 | Mainly Beta › Roll › Pdz3 Domain › | 0.50 | 29.0 | 3.12e-01 | 94.5% | 62.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4809246 | 206.1.1.68 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Couple_hipA | 0.76 | 65.0 | 6.76e-01 | 99.1% | 100.0% |
| 3948108 | 206.1.1.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C,Couple_hipA | 0.75 | 70.0 | 4.52e-01 | 100.0% | 24.5% |
| 1320090 | 206.1.1.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C,Couple_hipA | 0.73 | 68.0 | 4.44e-01 | 100.0% | 25.2% |
| None | — | 0.60 | 32.0 | 2.33e-01 | 100.0% | 21.1% | |
| 4000094 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.60 | 31.0 | 2.87e-01 | 80.7% | 37.2% |
| 4079733 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.60 | 31.0 | 2.29e-01 | 100.0% | 20.4% |
| 5027391 | 325.1.7.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H | 0.58 | 28.0 | 3.59e-01 | 94.5% | 78.5% |
| 3870788 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.55 | 35.0 | 3.55e-01 | 89.0% | 63.6% |
| 3880817 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.53 | 31.0 | 3.49e-01 | 76.1% | 75.0% |
| 4950848 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.50 | 45.0 | 3.30e-01 | 100.0% | 90.7% |