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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00113
Bact-VirN5_271_007G1_scaffold_5_prodigal-single.1__X__X__00113
Identity
- Kingdom:
- phage
Quality
73.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-84_189-246
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lumG01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.66 | 33.0 | 3.68e-01 | 96.5% | 58.9% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.58 | 35.0 | 4.42e-01 | 74.6% | 100.0% |
| 5zzjA02 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.57 | 45.0 | 3.53e-01 | 83.8% | 73.7% |
| 1n81A00 | 1.10.3030.10 | Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27 | 0.54 | 40.0 | 3.71e-01 | 78.9% | 93.0% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.53 | 30.0 | 3.26e-01 | 75.4% | 65.0% |
| 8gr7A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 42.0 | 3.31e-01 | 88.7% | 87.2% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.51 | 31.0 | 3.54e-01 | 81.7% | 80.2% |
| 7wz5A01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 38.0 | 3.76e-01 | 78.2% | 76.8% |
| 5gmkZ01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 37.0 | 3.20e-01 | 76.1% | 87.1% |
| 4nufA02 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.50 | 37.0 | 3.43e-01 | 76.1% | 67.0% |
| 4an8A02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.50 | 36.0 | 3.83e-01 | 73.2% | 93.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4020908 | 180.1.1.0 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase | 0.65 | 44.0 | 4.26e-01 | 80.3% | 61.3% |
| 3494868 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 43.0 | 3.77e-01 | 73.2% | 49.3% |
| 3847975 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.55 | 25.0 | 3.00e-01 | 83.8% | 62.1% |
| 4976341 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.55 | 34.0 | 3.30e-01 | 81.7% | 54.4% |
| 3814885 | 633.8.1.2 ↗ | alpha bundles › Bromodomain-like › MAST3 pre-PK domain-like › MAST3 pre-PK domain-like › PF26031 | 0.54 | 37.0 | 3.98e-01 | 97.2% | 81.7% |
| 4362095 | 1073.1.1.42 ↗ | alpha arrays › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › EVC2_like | 0.52 | 39.0 | 3.52e-01 | 80.3% | 84.4% |
| 3770290 | 4177.1.1.41 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › EVC2_like | 0.52 | 39.0 | 3.57e-01 | 80.3% | 83.6% |
| 3608391 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 37.0 | 3.72e-01 | 73.9% | 77.2% |