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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00132
Bact-VirN5_271_007G1_scaffold_5_prodigal-single.1__X__X__00132
Identity
- Kingdom:
- phage
Quality
61.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-87
D2
medium
residues 97-288
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00310__D139-312
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2od4B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 35.0 | 5.10e-01 | 73.4% | 98.9% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 37.0 | 5.11e-01 | 74.0% | 97.9% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 36.0 | 5.01e-01 | 74.0% | 95.9% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 38.0 | 5.04e-01 | 88.5% | 94.2% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 37.0 | 5.04e-01 | 72.9% | 96.0% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 41.0 | 5.29e-01 | 78.1% | 97.4% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 38.0 | 5.05e-01 | 74.0% | 95.3% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 34.0 | 4.64e-01 | 74.5% | 91.8% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 31.0 | 4.60e-01 | 72.4% | 100.0% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 37.0 | 4.88e-01 | 73.4% | 94.4% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 34.0 | 4.70e-01 | 74.5% | 96.8% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 35.0 | 4.75e-01 | 72.4% | 97.9% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 35.0 | 4.71e-01 | 75.0% | 95.9% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 32.0 | 4.63e-01 | 75.0% | 97.8% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 36.0 | 4.83e-01 | 72.9% | 98.1% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 36.0 | 4.85e-01 | 81.8% | 100.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 35.0 | 4.56e-01 | 72.4% | 93.1% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 34.0 | 4.45e-01 | 75.0% | 86.6% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 35.0 | 4.62e-01 | 74.5% | 94.2% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 35.0 | 4.49e-01 | 85.9% | 88.3% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 32.0 | 4.52e-01 | 74.0% | 98.9% |
| 1j27A00 | 3.30.70.1120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like | 0.65 | 34.0 | 4.55e-01 | 75.0% | 95.9% |
| 2yq1C00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.65 | 32.0 | 3.81e-01 | 75.0% | 66.4% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 35.0 | 4.63e-01 | 74.0% | 97.1% |
| 3hx9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 33.0 | 4.40e-01 | 72.4% | 92.9% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 33.0 | 4.47e-01 | 71.9% | 96.8% |
| 3fw9A03 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.64 | 35.0 | 3.66e-01 | 71.9% | 54.9% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.64 | 35.0 | 4.60e-01 | 76.0% | 100.0% |
| 1lq9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 35.0 | 4.48e-01 | 91.1% | 92.0% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.62 | 33.0 | 4.47e-01 | 76.6% | 98.0% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 32.0 | 4.26e-01 | 72.9% | 92.1% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 35.0 | 4.52e-01 | 84.4% | 100.0% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 36.0 | 4.66e-01 | 72.4% | 100.0% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 35.0 | 4.50e-01 | 73.4% | 96.4% |
| 4fvmA02 | 3.30.70.2820 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 34.0 | 4.45e-01 | 81.2% | 100.0% |
| 6c80A03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.61 | 38.0 | 3.57e-01 | 87.5% | 51.1% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 36.0 | 4.43e-01 | 74.5% | 96.6% |
| 1ztpA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.56 | 36.0 | 3.51e-01 | 93.2% | 57.5% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.52 | 38.0 | 4.21e-01 | 82.8% | 93.4% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.52 | 29.0 | 3.73e-01 | 71.4% | 96.2% |
| 1w1oA03 | 3.40.462.10 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain | 0.52 | 35.0 | 3.30e-01 | 81.2% | 56.1% |
| 4ah6A03 | 3.30.1360.30 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › GAD-like domain | 0.51 | 38.0 | 4.22e-01 | 82.8% | 98.0% |
| 3nwrA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.51 | 30.0 | 3.64e-01 | 73.4% | 92.4% |
| 3uj9A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 36.0 | 3.28e-01 | 71.9% | 84.5% |
| 5eltA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.50 | 30.0 | 3.42e-01 | 82.3% | 78.3% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3175147 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.74 | 38.0 | 5.30e-01 | 71.9% | 97.0% |
| 5032056 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 36.0 | 4.84e-01 | 74.0% | 87.4% |
| 4201083 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.72 | 36.0 | 4.91e-01 | 72.4% | 92.0% |
| 4928686 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 35.0 | 5.00e-01 | 77.6% | 98.9% |
| 5052583 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.71 | 36.0 | 4.74e-01 | 74.5% | 87.6% |
| 5055923 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 45.0 | 5.46e-01 | 97.4% | 98.4% |
| 5058378 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.70 | 37.0 | 4.93e-01 | 72.4% | 97.0% |
| 3292747 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.67 | 36.0 | 4.59e-01 | 74.5% | 89.1% |
| 3592989 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 35.0 | 4.75e-01 | 80.2% | 100.0% |
| 166476 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.64 | 34.0 | 4.49e-01 | 72.9% | 97.9% |
| 3693371 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 37.0 | 4.69e-01 | 76.6% | 99.1% |
| 2596972 | 304.4.1.13 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › SOR | 0.62 | 40.0 | 4.49e-01 | 79.7% | 83.1% |
| 3285458 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.62 | 40.0 | 4.76e-01 | 73.4% | 96.2% |
| 3768588 | 304.8.1.54 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 | 0.61 | 34.0 | 4.45e-01 | 99.5% | 99.0% |
| 4999371 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.60 | 45.0 | 5.01e-01 | 99.0% | 99.3% |
| 4463387 | 304.5.1.18 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › PrmA | 0.59 | 34.0 | 4.31e-01 | 78.1% | 100.0% |
| 3660259 | 304.6.1.5 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › Cytokin-bind | 0.58 | 39.0 | 3.40e-01 | 89.1% | 44.5% |
| 3839711 | 2004.1.1.221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG | 0.57 | 54.0 | 3.52e-01 | 100.0% | 26.3% |
| 4864170 | 304.4.1.24 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DyP_N | 0.51 | 37.0 | 4.02e-01 | 76.0% | 87.7% |
| 5063256 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.51 | 34.0 | 4.08e-01 | 70.3% | 100.0% |
| 434744 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.50 | 36.0 | 3.27e-01 | 71.9% | 84.5% |
| 3383965 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.50 | 35.0 | 3.22e-01 | 70.8% | 83.9% |
D3
medium
residues 308-353