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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00161

Bact-Vir

N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00161

Identity

Kingdom:
phage

Quality

51.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-103
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.64 42.0 4.25e-01 85.1% 67.7%
2e8gA01 1.20.1440.150 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.62 40.0 3.73e-01 70.3% 52.4%
3iqtA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.58 40.0 3.85e-01 97.0% 61.4%
1xwmA00 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.58 52.0 4.10e-01 100.0% 90.1%
1j77A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.56 43.0 3.47e-01 82.2% 56.8%
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.55 28.0 3.64e-01 95.0% 90.6%
3d0wA00 1.10.760.20 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Protein of unknown function DUF3243 0.53 37.0 4.00e-01 91.1% 86.0%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 41.0 4.27e-01 84.2% 94.8%
7zb5E01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.52 39.0 2.87e-01 80.2% 36.1%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 40.0 3.94e-01 88.1% 86.6%
3bhqA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 44.0 3.56e-01 99.0% 58.9%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4004034 109.4.1.1806 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27737, PF27745 0.61 51.0 3.87e-01 90.1% 85.4%
3309583 604.12.1.65 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.60 44.0 4.82e-01 84.2% 97.5%
3188597 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.60 46.0 4.80e-01 85.1% 91.1%
3201166 604.7.1.0 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.59 48.0 4.34e-01 86.1% 85.9%
3601765 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 50.0 3.21e-01 94.1% 36.5%
3593891 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.58 45.0 4.83e-01 81.2% 100.0%
4955803 601.7.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.58 43.0 4.19e-01 78.2% 88.7%
3580282 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 46.0 4.35e-01 86.1% 73.3%
3934523 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.56 44.0 4.53e-01 86.1% 90.5%
4996069 604.10.1.0 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.56 41.0 4.36e-01 85.1% 88.9%
3217001 109.12.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 0.52 35.0 3.79e-01 83.2% 81.2%
4143925 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.50 40.0 3.57e-01 86.1% 90.3%
D2 high residues 107-160
PDB
D3 high residues 174-271
PDB