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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00187
Bact-VirN5_271_007G1_scaffold_5_prodigal-single.1__X__X__00187
Identity
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-106
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8dgfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 68.0 | 5.57e-01 | 100.0% | 65.4% |
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 67.0 | 6.10e-01 | 100.0% | 85.0% |
| 2hyiC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 68.0 | 5.74e-01 | 100.0% | 91.0% |
| 6b4kB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 66.0 | 5.55e-01 | 100.0% | 90.6% |
| 3cu2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 60.0 | 4.65e-01 | 94.3% | 94.9% |
| 4crwB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 5.46e-01 | 99.0% | 94.9% |
| 7pliF02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 63.0 | 5.54e-01 | 99.0% | 98.7% |
| 4xrpC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 59.0 | 4.95e-01 | 94.3% | 90.3% |
| 2yw3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.68 | 58.0 | 4.73e-01 | 95.2% | 94.5% |
| 2i3bA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 59.0 | 4.90e-01 | 100.0% | 87.3% |
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 59.0 | 4.89e-01 | 100.0% | 79.1% |
| 2qxyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 49.0 | 4.78e-01 | 87.6% | 71.4% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 59.0 | 5.11e-01 | 100.0% | 89.9% |
| 2lciA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 57.0 | 5.31e-01 | 100.0% | 77.6% |
| 1ep3B02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.64 | 45.0 | 4.37e-01 | 78.1% | 65.0% |
| 4n9wA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.64 | 45.0 | 3.76e-01 | 72.4% | 44.1% |
| 3e66A01 | 3.30.420.230 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region | 0.63 | 46.0 | 4.05e-01 | 77.1% | 80.7% |
| 1z6tA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 56.0 | 4.75e-01 | 100.0% | 75.1% |
| 3g5tA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 53.0 | 3.86e-01 | 93.3% | 62.5% |
| 1ab5A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 49.0 | 4.66e-01 | 87.6% | 71.2% |
| 5c3uA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 41.0 | 4.28e-01 | 70.5% | 72.9% |
| 2wjeA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.62 | 53.0 | 4.18e-01 | 98.1% | 85.2% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 40.0 | 4.17e-01 | 70.5% | 70.8% |
| 7lzaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 47.0 | 4.55e-01 | 85.7% | 72.0% |
| 2acfB00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.62 | 52.0 | 4.43e-01 | 93.3% | 90.8% |
| 1eucA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.61 | 51.0 | 4.41e-01 | 93.3% | 74.1% |
| 4gicA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 45.0 | 4.14e-01 | 79.0% | 69.4% |
| 2b7nA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 53.0 | 4.78e-01 | 97.1% | 93.2% |
| 6jdrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 53.0 | 4.88e-01 | 100.0% | 90.2% |
| 1a04A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 47.0 | 4.49e-01 | 87.6% | 71.0% |
| 4ldaB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 47.0 | 4.51e-01 | 90.5% | 71.7% |
| 1bmtA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.59 | 50.0 | 4.39e-01 | 93.3% | 62.7% |
| 4o1hA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 44.0 | 4.29e-01 | 86.7% | 70.6% |
| 5i7wA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 40.0 | 3.93e-01 | 70.5% | 63.2% |
| 1xr4B01 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.59 | 43.0 | 3.38e-01 | 78.1% | 36.9% |
| 2ljaA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 41.0 | 3.68e-01 | 72.4% | 61.2% |
| 4d9gA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 40.0 | 3.91e-01 | 70.5% | 73.1% |
| 2csuA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.59 | 51.0 | 4.48e-01 | 100.0% | 87.3% |
| 3ilhA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 48.0 | 4.54e-01 | 93.3% | 78.2% |
| 1k68A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 49.0 | 4.47e-01 | 93.3% | 71.4% |
| 5djsA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 3.65e-01 | 81.0% | 77.1% |
| 1obbA00 | 3.90.1820.10 | Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase | 0.58 | 48.0 | 3.18e-01 | 93.3% | 79.1% |
| 3b1fA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 48.0 | 4.17e-01 | 95.2% | 83.4% |
| 3hebA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 47.0 | 4.35e-01 | 93.3% | 71.8% |
| 1gz0B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.57 | 41.0 | 3.53e-01 | 78.1% | 47.3% |
| 4d6yA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 45.0 | 4.39e-01 | 93.3% | 77.7% |
| 1mg5A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 48.0 | 3.74e-01 | 99.0% | 89.0% |
| 6iheA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 4.28e-01 | 93.3% | 92.9% |
| 2b3zA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.55 | 49.0 | 3.89e-01 | 100.0% | 72.4% |
| 5bseA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 46.0 | 3.93e-01 | 93.3% | 69.4% |
| 5vbfA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 46.0 | 3.43e-01 | 94.3% | 56.9% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 41.0 | 3.63e-01 | 81.9% | 64.6% |
| 2gt1A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 40.0 | 3.49e-01 | 78.1% | 81.6% |
| 5t3yA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.20e-01 | 93.3% | 75.2% |
| 2py6A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 4.04e-01 | 100.0% | 75.0% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.53 | 45.0 | 4.02e-01 | 92.4% | 80.5% |
| 2iyeA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 46.0 | 4.08e-01 | 100.0% | 80.9% |
| 3louA02 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.51 | 41.0 | 3.44e-01 | 90.5% | 69.0% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057591 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.77 | 69.0 | 6.30e-01 | 100.0% | 75.6% |
| 4318397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.77 | 70.0 | 6.33e-01 | 100.0% | 86.4% |
| 3838853 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.74 | 67.0 | 6.03e-01 | 100.0% | 73.8% |
| 4983712 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.73 | 65.0 | 5.42e-01 | 100.0% | 57.7% |
| 3388291 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 64.0 | 6.08e-01 | 100.0% | 82.4% |
| None | — | 0.72 | 65.0 | 5.23e-01 | 100.0% | 79.0% | |
| 3933239 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.72 | 66.0 | 5.64e-01 | 100.0% | 92.7% |
| 5028851 | 2004.1.1.1219 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7504 | 0.71 | 64.0 | 5.18e-01 | 100.0% | 85.4% |
| 4370162 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 64.0 | 5.96e-01 | 100.0% | 83.1% |
| 340897 | 2002.1.1.37 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ribul_P_3_epim | 0.71 | 60.0 | 4.67e-01 | 94.3% | 94.5% |
| 3341460 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.70 | 63.0 | 5.08e-01 | 100.0% | 54.1% |
| 4443044 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.70 | 64.0 | 4.51e-01 | 100.0% | 39.7% |
| 4969466 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 63.0 | 5.41e-01 | 100.0% | 67.3% |
| 3613905 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.70 | 63.0 | 4.69e-01 | 100.0% | 47.9% |
| 3514016 | 7516.1.1.78 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF1647 | 0.68 | 48.0 | 3.52e-01 | 72.4% | 33.8% |
| 4355579 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.65 | 52.0 | 3.96e-01 | 87.6% | 91.9% |
| 4514723 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.64 | 48.0 | 4.45e-01 | 79.0% | 77.7% |
| 4631097 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.63 | 56.0 | 4.08e-01 | 100.0% | 69.8% |
| 4949587 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.62 | 44.0 | 3.62e-01 | 73.3% | 41.6% |
| 3474272 | 7512.1.1.27 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › O-FucT | 0.62 | 46.0 | 3.67e-01 | 77.1% | 59.0% |
| 5026943 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 46.0 | 4.01e-01 | 79.0% | 57.0% |
| 4365607 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.61 | 51.0 | 4.39e-01 | 93.3% | 72.0% |
| 4972413 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 43.0 | 3.53e-01 | 72.4% | 44.1% |
| 4110092 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.61 | 44.0 | 4.05e-01 | 81.9% | 56.6% |
| 4101733 | 7570.1.1.1 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › Mur_ligase_C | 0.61 | 44.0 | 4.01e-01 | 81.0% | 55.9% |
| 3272042 | 2003.1.5.246 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12, KR | 0.60 | 49.0 | 3.19e-01 | 93.3% | 38.0% |
| 4542081 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.60 | 40.0 | 3.76e-01 | 79.0% | 57.3% |
| 3694264 | 2003.1.1.11 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3Beta_HSD | 0.59 | 48.0 | 3.34e-01 | 90.5% | 44.6% |
| 2061471 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.59 | 43.0 | 3.31e-01 | 78.1% | 79.1% |
| 4939542 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.58 | 46.0 | 4.44e-01 | 87.6% | 77.6% |
| 3187320 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.58 | 39.0 | 2.77e-01 | 79.0% | 23.6% |
| 3704309 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.58 | 39.0 | 2.99e-01 | 70.5% | 70.8% |
| 4998321 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.57 | 45.0 | 3.87e-01 | 87.6% | 62.8% |
| 5046783 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 49.0 | 4.21e-01 | 97.1% | 82.9% |
| 4019283 | 2004.1.1.880 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C, DEXQc_Suv3 | 0.57 | 50.0 | 3.43e-01 | 100.0% | 31.5% |
| 3621369 | 7516.1.1.14 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › GNT-I | 0.56 | 43.0 | 2.91e-01 | 80.0% | 25.9% |
| 3968535 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.56 | 44.0 | 3.74e-01 | 85.7% | 65.9% |
| 4992215 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.56 | 51.0 | 4.03e-01 | 100.0% | 74.4% |
| 5037748 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.56 | 47.0 | 3.92e-01 | 94.3% | 85.1% |
| 4983478 | 2003.1.1.27 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N | 0.56 | 47.0 | 4.11e-01 | 93.3% | 87.9% |
| 4999881 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.56 | 40.0 | 3.19e-01 | 75.2% | 76.0% |
| 5056796 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.56 | 47.0 | 3.95e-01 | 97.1% | 97.5% |
| 4094662 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.56 | 44.0 | 4.07e-01 | 93.3% | 64.1% |
| 3285625 | 7516.1.1.56 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_7C | 0.55 | 39.0 | 2.88e-01 | 71.4% | 66.5% |
| 4033376 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 39.0 | 3.23e-01 | 72.4% | 41.1% |
| 5001085 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.55 | 49.0 | 3.83e-01 | 100.0% | 70.6% |
| 3732734 | 2003.1.1.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 | 0.55 | 46.0 | 3.80e-01 | 91.4% | 96.3% |
| 5082494 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.55 | 48.0 | 3.86e-01 | 100.0% | 94.1% |
| 4980571 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.55 | 47.0 | 3.84e-01 | 100.0% | 95.5% |
| 4973928 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 38.0 | 3.07e-01 | 80.0% | 36.7% |
| 3987876 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.54 | 47.0 | 4.23e-01 | 100.0% | 87.1% |
| None | — | 0.54 | 45.0 | 3.81e-01 | 94.3% | 83.2% | |
| 5032144 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.54 | 39.0 | 3.25e-01 | 77.1% | 76.5% |
| 3839871 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.54 | 47.0 | 3.90e-01 | 100.0% | 65.5% |
| 4199527 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.53 | 37.0 | 2.79e-01 | 80.0% | 28.7% |
| 4594999 | 2007.15.1.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr | 0.53 | 45.0 | 4.21e-01 | 98.1% | 83.6% |
| 5050939 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.52 | 46.0 | 3.62e-01 | 100.0% | 72.8% |
| 4635445 | 7516.1.1.5 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD | 0.52 | 39.0 | 3.12e-01 | 79.0% | 45.4% |
| 4038247 | 2007.1.3.39 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PF27348 | 0.52 | 42.0 | 4.23e-01 | 88.6% | 89.5% |
| 4949256 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.52 | 45.0 | 3.64e-01 | 100.0% | 78.2% |
| 4932869 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.52 | 41.0 | 2.72e-01 | 85.7% | 92.7% |
| 4464173 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.52 | 43.0 | 3.97e-01 | 92.4% | 89.3% |
| 3948637 | 7514.1.1.2 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › SIP | 0.51 | 45.0 | 4.39e-01 | 100.0% | 90.0% |
| 4993174 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.50 | 44.0 | 3.00e-01 | 100.0% | 32.2% |
D2
high
residues 112-165
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tr8A02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.86 | 57.0 | 6.64e-01 | 85.2% | 94.9% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.85 | 75.0 | 6.92e-01 | 100.0% | 91.4% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 74.0 | 6.92e-01 | 100.0% | 92.5% |
| 4lzjA02 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.82 | 59.0 | 5.13e-01 | 100.0% | 51.9% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.80 | 55.0 | 4.76e-01 | 72.2% | 63.7% |
| 2l2dA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.79 | 58.0 | 5.18e-01 | 81.5% | 57.5% |
| 1jqjD03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 68.0 | 5.91e-01 | 100.0% | 69.8% |
| 4gewA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.77 | 58.0 | 5.08e-01 | 100.0% | 55.8% |
| 1a5tA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.77 | 53.0 | 5.95e-01 | 79.6% | 97.5% |
| 1sxjA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.77 | 67.0 | 6.16e-01 | 100.0% | 94.4% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.76 | 56.0 | 5.29e-01 | 100.0% | 65.2% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 56.0 | 5.41e-01 | 98.1% | 71.7% |
| 2damA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 57.0 | 5.27e-01 | 81.5% | 65.7% |
| 1ixkA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.75 | 50.0 | 4.05e-01 | 77.8% | 36.2% |
| 1dv0A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 54.0 | 5.78e-01 | 94.4% | 95.6% |
| 2di0A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 54.0 | 5.76e-01 | 100.0% | 93.5% |
| 3e46A02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 50.0 | 5.44e-01 | 92.6% | 90.7% |
| 1wivA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 51.0 | 4.62e-01 | 98.1% | 54.8% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.72 | 54.0 | 5.34e-01 | 81.5% | 78.9% |
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.71 | 59.0 | 5.78e-01 | 92.6% | 84.7% |
| 5wpjB03 | 1.10.8.660 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 51.0 | 5.21e-01 | 85.2% | 80.8% |
| 2lvaA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 52.0 | 5.61e-01 | 96.3% | 97.7% |
| 1v92A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.69 | 49.0 | 5.18e-01 | 98.1% | 89.1% |
| 2d6fC03 | 1.10.150.380 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GatB domain, N-terminal subdomain | 0.69 | 52.0 | 5.27e-01 | 100.0% | 84.6% |
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 56.0 | 5.35e-01 | 98.1% | 85.9% |
| 1y1aA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.67 | 56.0 | 4.64e-01 | 94.4% | 96.9% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 48.0 | 4.04e-01 | 81.5% | 57.3% |
| 3w0lD01 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 56.0 | 4.59e-01 | 100.0% | 52.5% |
| 4dbgB02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.63 | 52.0 | 5.01e-01 | 90.7% | 83.6% |
| 4bxoB02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.61 | 53.0 | 4.99e-01 | 100.0% | 81.5% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.60 | 49.0 | 4.19e-01 | 100.0% | 66.7% |
| 7osfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 3.28e-01 | 100.0% | 39.6% |
| 4i8qA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 48.0 | 2.98e-01 | 98.1% | 59.9% |
| 4i3vA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 49.0 | 3.09e-01 | 100.0% | 64.3% |
| 6fjxA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 49.0 | 3.07e-01 | 100.0% | 64.6% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 43.0 | 4.06e-01 | 96.3% | 87.1% |
| 2ppxA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 35.0 | 3.44e-01 | 72.2% | 91.8% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 36.0 | 3.31e-01 | 75.9% | 76.3% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 34.0 | 3.29e-01 | 70.4% | 78.8% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 35.0 | 3.36e-01 | 70.4% | 77.3% |
| 4tq1A03 | 1.10.246.190 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Autophagy protein Apg5, helix rich domain | 0.51 | 36.0 | 3.60e-01 | 79.6% | 93.1% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030158 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.91 | 67.0 | 7.28e-01 | 77.8% | 100.0% |
| 1843727 | 103.18.1.0 ↗ | alpha arrays › RuvA-C | 0.90 | 69.0 | 7.10e-01 | 81.5% | 84.6% |
| 3216276 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.86 | 56.0 | 6.37e-01 | 74.1% | 90.0% |
| 4966359 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 77.0 | 7.08e-01 | 100.0% | 78.6% |
| 4953552 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.85 | 60.0 | 6.76e-01 | 75.9% | 100.0% |
| 4951061 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.85 | 56.0 | 6.44e-01 | 94.4% | 92.5% |
| 4199673 | 103.1.1.19 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › HYPK_UBA | 0.84 | 58.0 | 6.69e-01 | 79.6% | 97.5% |
| 3941050 | 103.1.1.28 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 | 0.84 | 58.0 | 6.66e-01 | 100.0% | 97.5% |
| 3924698 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.84 | 59.0 | 6.44e-01 | 100.0% | 88.9% |
| 3944612 | 103.13.1.0 ↗ | alpha arrays › RuvA-C › C-terminal lid domain of glucokinase regulatory protein › C-terminal lid domain of glucokinase regulatory protein | 0.83 | 60.0 | 5.46e-01 | 100.0% | 58.6% |
| 3358659 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.83 | 58.0 | 6.61e-01 | 100.0% | 97.5% |
| 3022565 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.83 | 59.0 | 6.61e-01 | 77.8% | 100.0% |
| 4669159 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.83 | 57.0 | 6.56e-01 | 100.0% | 97.5% |
| 3391782 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.82 | 57.0 | 6.49e-01 | 100.0% | 97.5% |
| 3799659 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.82 | 58.0 | 6.66e-01 | 92.6% | 100.0% |
| 3995392 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.82 | 58.0 | 6.32e-01 | 100.0% | 88.9% |
| 4263446 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.82 | 57.0 | 6.48e-01 | 100.0% | 97.5% |
| 3702894 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.82 | 62.0 | 6.42e-01 | 83.3% | 90.0% |
| 3416433 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 71.0 | 5.88e-01 | 98.1% | 68.4% |
| 3530883 | 103.1.1.28 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 | 0.81 | 58.0 | 6.27e-01 | 100.0% | 88.9% |
| 3593684 | 103.18.1.0 ↗ | alpha arrays › RuvA-C | 0.81 | 60.0 | 6.40e-01 | 79.6% | 100.0% |
| 3265338 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.80 | 64.0 | 6.17e-01 | 88.9% | 76.7% |
| 3621722 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.80 | 59.0 | 6.47e-01 | 94.4% | 93.3% |
| 3818969 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.80 | 56.0 | 6.43e-01 | 92.6% | 100.0% |
| 4001580 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.80 | 60.0 | 6.54e-01 | 90.7% | 95.6% |
| 3620421 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.80 | 64.0 | 6.40e-01 | 100.0% | 85.5% |
| 3810769 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.80 | 56.0 | 6.44e-01 | 92.6% | 100.0% |
| 3654319 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.80 | 57.0 | 6.22e-01 | 94.4% | 91.1% |
| 3784319 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.80 | 55.0 | 6.31e-01 | 90.7% | 97.5% |
| 3731213 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.79 | 61.0 | 6.57e-01 | 94.4% | 97.8% |
| 3789667 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.79 | 59.0 | 6.37e-01 | 92.6% | 93.3% |
| 3398979 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.79 | 56.0 | 6.34e-01 | 88.9% | 100.0% |
| 140485 | 103.1.1.91 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28552 | 0.79 | 58.0 | 5.18e-01 | 81.5% | 57.5% |
| 3251568 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.79 | 58.0 | 6.22e-01 | 83.3% | 93.3% |
| 3274658 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.79 | 54.0 | 6.18e-01 | 90.7% | 97.5% |
| 3399890 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.78 | 55.0 | 5.81e-01 | 74.1% | 88.9% |
| 3315600 | 3764.1.1.0 ↗ | alpha arrays › Repressor activator protein 1 (RAP1) helical bundle domain › Repressor activator protein 1 (RAP1) helical bundle domain › Repressor activator protein 1 (RAP1) helical bundle domain | 0.78 | 55.0 | 5.50e-01 | 74.1% | 72.7% |
| 3224177 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.78 | 58.0 | 6.30e-01 | 94.4% | 95.6% |
| 3486750 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.78 | 60.0 | 6.50e-01 | 98.1% | 97.8% |
| 3197865 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.78 | 60.0 | 6.46e-01 | 96.3% | 97.8% |
| 3704805 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.78 | 56.0 | 6.02e-01 | 94.4% | 91.1% |
| 3260073 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.78 | 57.0 | 5.50e-01 | 79.6% | 70.0% |
| 3491916 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.78 | 63.0 | 5.52e-01 | 100.0% | 60.0% |
| 3392055 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.78 | 62.0 | 6.04e-01 | 100.0% | 78.3% |
| 3557283 | 103.1.1.28 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 | 0.77 | 60.0 | 6.27e-01 | 90.7% | 90.0% |
| 3483851 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.77 | 57.0 | 6.15e-01 | 100.0% | 93.3% |
| 3645808 | 103.1.1.19 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › HYPK_UBA | 0.77 | 59.0 | 5.75e-01 | 83.3% | 81.7% |
| 3729504 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.77 | 54.0 | 6.15e-01 | 100.0% | 100.0% |
| 3272149 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.77 | 58.0 | 6.29e-01 | 85.2% | 95.6% |
| 3568120 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.77 | 59.0 | 5.89e-01 | 90.7% | 80.0% |
| 3575611 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.77 | 58.0 | 5.25e-01 | 90.7% | 61.4% |
| 4025664 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.77 | 55.0 | 5.72e-01 | 100.0% | 82.0% |
| 3818970 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.77 | 58.0 | 6.00e-01 | 98.1% | 86.0% |
| 3550319 | 103.1.1.91 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28552 | 0.77 | 58.0 | 5.99e-01 | 98.1% | 86.0% |
| 3297121 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.77 | 59.0 | 6.13e-01 | 83.3% | 94.0% |
| 3240717 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.76 | 59.0 | 6.12e-01 | 87.0% | 90.0% |
| 3930619 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.76 | 56.0 | 5.84e-01 | 96.3% | 84.0% |
| 3178132 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 60.0 | 4.72e-01 | 83.3% | 73.3% |
| 3320432 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 57.0 | 5.57e-01 | 98.1% | 72.9% |
| 3249342 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.76 | 61.0 | 5.88e-01 | 98.1% | 78.3% |
| 3428162 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.76 | 62.0 | 6.17e-01 | 98.1% | 87.3% |
| 3803934 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 62.0 | 6.20e-01 | 98.1% | 87.3% |
| 3595001 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 54.0 | 5.74e-01 | 79.6% | 91.1% |
| 3226566 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 55.0 | 5.35e-01 | 87.0% | 70.0% |
| 163972 | 103.1.1.28 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 | 0.76 | 56.0 | 5.29e-01 | 100.0% | 65.2% |
| 3233327 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.76 | 61.0 | 5.92e-01 | 100.0% | 80.0% |
| 3501828 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.76 | 58.0 | 5.98e-01 | 96.3% | 88.0% |
| 4991581 | 103.1.1.19 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › HYPK_UBA | 0.76 | 58.0 | 6.09e-01 | 83.3% | 89.8% |
| 3435282 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 63.0 | 6.07e-01 | 100.0% | 81.7% |
| 3832034 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 62.0 | 6.02e-01 | 98.1% | 81.7% |
| 3591175 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.75 | 61.0 | 5.75e-01 | 98.1% | 73.8% |
| 3513032 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.75 | 61.0 | 6.06e-01 | 94.4% | 85.5% |
| 4236344 | 103.1.1.28 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_8 | 0.75 | 56.0 | 5.61e-01 | 98.1% | 78.2% |
| 3925669 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.74 | 58.0 | 6.01e-01 | 83.3% | 92.0% |
| 3691980 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.74 | 59.0 | 5.24e-01 | 87.0% | 60.3% |
| 3368577 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.74 | 55.0 | 5.22e-01 | 81.5% | 69.2% |
| 4207508 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.74 | 58.0 | 5.80e-01 | 83.3% | 83.6% |
| 4886682 | 230.3.1.3 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF-Ts_N | 0.74 | 55.0 | 5.74e-01 | 96.3% | 86.0% |
| 4438237 | 2007.6.1.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS, GKRP_SIS_N | 0.73 | 56.0 | 3.50e-01 | 100.0% | 15.0% |
| 3180404 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.73 | 58.0 | 6.01e-01 | 92.6% | 92.0% |
| 3997192 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 58.0 | 5.04e-01 | 90.7% | 57.5% |
| 3473478 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.73 | 58.0 | 6.08e-01 | 88.9% | 94.0% |
| 3749044 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.72 | 58.0 | 5.63e-01 | 92.6% | 78.3% |
| 4123674 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 55.0 | 5.52e-01 | 92.6% | 80.0% |
| 3658332 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.72 | 56.0 | 5.85e-01 | 85.2% | 90.0% |
| 3480573 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 53.0 | 5.55e-01 | 90.7% | 86.0% |
| 3255224 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 59.0 | 5.71e-01 | 100.0% | 81.7% |
| 4028162 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 57.0 | 5.90e-01 | 85.2% | 92.0% |
| 3703314 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.71 | 54.0 | 5.26e-01 | 92.6% | 73.3% |
| 3251832 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.71 | 57.0 | 5.74e-01 | 87.0% | 88.7% |
| 4011459 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.69 | 53.0 | 5.47e-01 | 85.2% | 90.0% |
| 3813410 | 103.1.1.30 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › GIP1_N | 0.69 | 51.0 | 4.99e-01 | 83.3% | 73.3% |
| 3640240 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.67 | 57.0 | 4.96e-01 | 92.6% | 62.5% |
| 4506746 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.51 | 46.0 | 3.11e-01 | 100.0% | 33.2% |
D3
high
residues 174-301
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.76 | 65.0 | 6.64e-01 | 100.0% | 93.7% |
| 7p5hB03 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.65 | 30.0 | 3.53e-01 | 70.3% | 60.7% |
| 2v6eA02 | 1.20.1440.270 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.62 | 49.0 | 4.94e-01 | 85.9% | 83.7% |
| 1zvwA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.61 | 26.0 | 3.34e-01 | 79.7% | 69.7% |
| 2b0hA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 45.0 | 4.59e-01 | 99.2% | 78.1% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.60 | 45.0 | 4.05e-01 | 77.3% | 81.6% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.60 | 26.0 | 3.33e-01 | 76.6% | 70.1% |
| 5xfaA04 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.60 | 28.0 | 3.28e-01 | 70.3% | 62.4% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 45.0 | 4.70e-01 | 100.0% | 87.2% |
| 5x56B00 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.59 | 39.0 | 4.27e-01 | 99.2% | 82.9% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 43.0 | 4.29e-01 | 100.0% | 73.9% |
| 2rgnB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.58 | 39.0 | 3.28e-01 | 75.0% | 42.2% |
| 2p0nA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.57 | 45.0 | 4.15e-01 | 100.0% | 65.8% |
| 4dllB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 42.0 | 4.19e-01 | 75.8% | 87.7% |
| 2gf2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 41.0 | 4.09e-01 | 75.0% | 88.8% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.56 | 27.0 | 3.18e-01 | 71.1% | 62.5% |
| 2xzeB00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 34.0 | 3.37e-01 | 90.6% | 54.3% |
| 3ripA02 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.56 | 41.0 | 3.23e-01 | 75.8% | 70.3% |
| 2dbhA01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.56 | 28.0 | 3.34e-01 | 91.4% | 72.2% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.55 | 37.0 | 4.22e-01 | 89.1% | 89.7% |
| 3g0oA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 40.0 | 4.17e-01 | 75.8% | 90.1% |
| 3ckyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 40.0 | 3.98e-01 | 75.0% | 83.6% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.55 | 38.0 | 4.11e-01 | 89.8% | 84.1% |
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.55 | 41.0 | 4.25e-01 | 77.3% | 91.7% |
| 3gi8C00 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.55 | 46.0 | 3.20e-01 | 91.4% | 96.3% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 33.0 | 3.51e-01 | 86.7% | 67.9% |
| 2mn4A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 28.0 | 3.21e-01 | 86.7% | 64.9% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 39.0 | 4.02e-01 | 75.8% | 88.6% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 39.0 | 2.99e-01 | 75.8% | 71.7% |
| 4dylA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 39.0 | 3.09e-01 | 75.8% | 76.0% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 35.0 | 3.95e-01 | 82.0% | 87.8% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.52 | 35.0 | 3.57e-01 | 89.8% | 68.8% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 34.0 | 3.31e-01 | 98.4% | 56.5% |
| 3tixA02 | 6.10.140.1690 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 31.0 | 3.80e-01 | 86.7% | 94.9% |
| 2okcB01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.52 | 34.0 | 3.58e-01 | 96.9% | 70.8% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.50 | 37.0 | 4.00e-01 | 87.5% | 89.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987909 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.71 | 64.0 | 6.31e-01 | 100.0% | 92.6% |
| 3240158 | 3525.1.1.0 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain | 0.67 | 31.0 | 3.66e-01 | 91.4% | 61.1% |
| 5073295 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.59 | 42.0 | 3.55e-01 | 73.4% | 64.9% |
| 3704762 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 38.0 | 3.87e-01 | 90.6% | 66.4% |
| 5001330 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 31.0 | 3.30e-01 | 72.7% | 55.7% |
| 3249408 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.59 | 39.0 | 3.30e-01 | 75.8% | 41.4% |
| 3945031 | 5086.1.1.86 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG | 0.58 | 28.0 | 2.84e-01 | 71.1% | 45.4% |
| 3285802 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.54 | 44.0 | 4.28e-01 | 99.2% | 78.6% |
| 3219872 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.54 | 44.0 | 4.33e-01 | 100.0% | 80.0% |
| 3307722 | 141.1.1.2 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › SQS_PSY | 0.53 | 45.0 | 3.41e-01 | 91.4% | 42.2% |
| None | — | 0.53 | 46.0 | 3.45e-01 | 95.3% | 80.6% | |
| 3631429 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.52 | 42.0 | 3.94e-01 | 99.2% | 69.4% |
| 5009764 | 1079.1.1.11 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › NicO | 0.52 | 43.0 | 3.30e-01 | 89.1% | 72.5% |
| 3278851 | 3538.1.1.4 ↗ | extended segments › MerF › MerF › MerF › LysE | 0.52 | 43.0 | 3.65e-01 | 89.1% | 80.3% |
| 3346621 | 192.29.1.115 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF599 | 0.52 | 43.0 | 3.70e-01 | 90.6% | 71.9% |
| 3514684 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 38.0 | 3.97e-01 | 89.8% | 85.2% |
| 3239452 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.51 | 46.0 | 4.28e-01 | 100.0% | 78.7% |