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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00189
Bact-VirN5_271_007G1_scaffold_5_prodigal-single.1__X__X__00189
Identity
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-85
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gftA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 39.0 | 3.82e-01 | 78.9% | 68.3% |
| 3cwiA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 37.0 | 3.56e-01 | 73.7% | 66.2% |
| 5l2qB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 43.0 | 3.07e-01 | 100.0% | 37.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4986806 | 375.1.4.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain | 0.61 | 36.0 | 4.03e-01 | 82.5% | 80.0% |
| 3943642 | 375.1.1.130 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 | 0.61 | 38.0 | 4.18e-01 | 94.7% | 80.0% |
| 3976145 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 38.0 | 4.16e-01 | 87.7% | 80.0% |
| 3702994 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.51 | 36.0 | 3.32e-01 | 77.2% | 62.5% |
| 3595879 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 36.0 | 3.27e-01 | 78.9% | 58.8% |
D2
high
residues 249-356
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2azmA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.76 | 50.0 | 5.24e-01 | 89.8% | 72.3% |
| 3sqdB01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.75 | 51.0 | 5.20e-01 | 89.8% | 71.0% |
| 3shtA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.70 | 45.0 | 4.87e-01 | 88.0% | 77.8% |
| 3l41A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.70 | 47.0 | 4.85e-01 | 89.8% | 73.3% |
| 2wjwA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 4.21e-01 | 93.5% | 76.6% |
| 3k1yA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.59 | 49.0 | 4.21e-01 | 93.5% | 98.9% |
| 3lucA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 46.0 | 4.43e-01 | 87.0% | 95.3% |
| 3i09A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 50.0 | 4.06e-01 | 95.4% | 79.0% |
| 2jzcA00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 47.0 | 3.88e-01 | 89.8% | 85.1% |
| 4qboA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 41.0 | 4.41e-01 | 75.9% | 96.7% |
| 2csuA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.57 | 48.0 | 4.24e-01 | 94.4% | 95.8% |
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 47.0 | 4.50e-01 | 90.7% | 92.1% |
| 7mjzA01 | 3.40.50.12160 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylthiotransferase, N-terminal domain | 0.57 | 45.0 | 4.39e-01 | 86.1% | 92.6% |
| 4qbnA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 40.0 | 4.23e-01 | 74.1% | 100.0% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 45.0 | 4.50e-01 | 86.1% | 89.3% |
| 2l69A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 49.0 | 4.62e-01 | 100.0% | 100.0% |
| 1ipaA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.56 | 47.0 | 4.25e-01 | 93.5% | 97.4% |
| 1ceqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 3.83e-01 | 77.8% | 81.8% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 45.0 | 4.17e-01 | 89.8% | 83.3% |
| 4aktB00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.55 | 50.0 | 3.57e-01 | 100.0% | 76.5% |
| 4ly4A00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.55 | 45.0 | 3.39e-01 | 90.7% | 97.9% |
| 1gcuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 4.14e-01 | 89.8% | 95.1% |
| 3n0wA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 42.0 | 3.98e-01 | 82.4% | 84.8% |
| 3mweB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 3.71e-01 | 76.9% | 93.5% |
| 4r3vA00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.55 | 48.0 | 4.07e-01 | 97.2% | 86.0% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 3.93e-01 | 89.8% | 98.8% |
| 3p24C02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.54 | 48.0 | 3.98e-01 | 99.1% | 87.6% |
| 1ez4B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 40.0 | 3.63e-01 | 75.9% | 97.3% |
| 5zgcF00 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.54 | 44.0 | 3.64e-01 | 91.7% | 85.8% |
| 2gfqA02 | 3.40.50.10700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › AF0625-like | 0.54 | 40.0 | 4.39e-01 | 78.7% | 100.0% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 4.10e-01 | 90.7% | 92.6% |
| 1z2nX01 | 3.40.50.10820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Inositol 1,3,4-trisphosphate 5/6-kinase domain | 0.53 | 42.0 | 4.45e-01 | 88.9% | 99.0% |
| 2jfzB01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 4.06e-01 | 90.7% | 81.5% |
| 3qq5A02 | 3.40.50.11420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 3.97e-01 | 82.4% | 80.7% |
| 2g1uA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 3.62e-01 | 79.6% | 84.7% |
| 6xm1C01 | 3.40.50.2060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 | 0.52 | 38.0 | 3.65e-01 | 79.6% | 81.5% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.51 | 36.0 | 3.59e-01 | 72.2% | 89.4% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 38.0 | 3.63e-01 | 78.7% | 93.8% |
| 3ozbA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.51 | 40.0 | 3.16e-01 | 85.2% | 100.0% |
| 2p11A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.50 | 41.0 | 3.80e-01 | 91.7% | 97.9% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 3.98e-01 | 94.4% | 97.0% |
| 1u3dA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 40.0 | 3.61e-01 | 88.9% | 82.6% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3478592 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.77 | 54.0 | 5.36e-01 | 89.8% | 70.0% |
| 3301120 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.77 | 54.0 | 5.30e-01 | 89.8% | 67.8% |
| 3684291 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.77 | 53.0 | 5.38e-01 | 88.9% | 72.4% |
| 4485027 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.76 | 50.0 | 5.08e-01 | 89.8% | 67.0% |
| 3607887 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.76 | 52.0 | 4.88e-01 | 90.7% | 58.5% |
| 3709507 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.75 | 53.0 | 4.94e-01 | 93.5% | 58.5% |
| 3592940 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.75 | 50.0 | 5.00e-01 | 88.0% | 66.4% |
| 3410319 | 7568.1.1.6 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › RTT107_BRCT_5 | 0.75 | 51.0 | 5.02e-01 | 88.9% | 65.2% |
| 3475259 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.74 | 51.0 | 5.25e-01 | 87.0% | 73.3% |
| 3608723 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.71 | 52.0 | 5.37e-01 | 88.0% | 82.0% |
| 3272160 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.68 | 47.0 | 5.13e-01 | 88.0% | 86.7% |
| 3226461 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.62 | 52.0 | 4.54e-01 | 89.8% | 67.5% |
| 3839749 | 7543.1.1.2 ↗ | a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS | 0.61 | 50.0 | 4.85e-01 | 88.9% | 95.0% |
| 3717368 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.61 | 52.0 | 4.34e-01 | 90.7% | 55.6% |
| 4180018 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.60 | 46.0 | 4.60e-01 | 89.8% | 79.1% |
| 4121821 | 7568.1.1.4 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 | 0.60 | 48.0 | 4.74e-01 | 89.8% | 80.0% |
| 3743324 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.60 | 48.0 | 4.73e-01 | 89.8% | 80.9% |
| 5072238 | 7512.1.1.12 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_tran_28_C | 0.59 | 48.0 | 3.90e-01 | 88.0% | 64.4% |
| 4524961 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.59 | 48.0 | 4.31e-01 | 88.0% | 77.3% |
| 4243855 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.58 | 47.0 | 4.30e-01 | 87.0% | 82.1% |
| 4965794 | 2007.1.5.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG | 0.58 | 50.0 | 4.52e-01 | 93.5% | 89.0% |
| 4062717 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.58 | 48.0 | 3.55e-01 | 93.5% | 67.1% |
| 4306564 | 7512.1.1.12 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_tran_28_C | 0.57 | 47.0 | 4.01e-01 | 89.8% | 93.3% |
| 4625700 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.57 | 47.0 | 4.30e-01 | 88.9% | 81.4% |
| 3520987 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.57 | 46.0 | 4.07e-01 | 86.1% | 97.4% |
| 3387168 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.57 | 46.0 | 4.21e-01 | 86.1% | 82.9% |
| 4562088 | 7510.1.1.3 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › FA_synthesis | 0.57 | 47.0 | 4.15e-01 | 89.8% | 88.7% |
| 4215948 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.57 | 46.0 | 4.45e-01 | 87.0% | 94.2% |
| 10020 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.56 | 49.0 | 4.35e-01 | 98.1% | 96.9% |
| 5063868 | 2004.1.1.101 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB | 0.56 | 46.0 | 3.51e-01 | 90.7% | 68.5% |
| 4682511 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 46.0 | 4.40e-01 | 90.7% | 93.1% |
| 4418246 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 45.0 | 4.05e-01 | 88.0% | 76.8% |
| 4614430 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 45.0 | 4.16e-01 | 87.0% | 81.4% |
| 4943417 | 2007.1.3.69 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Radical_SAM | 0.56 | 45.0 | 4.39e-01 | 87.0% | 90.0% |
| 140458 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.56 | 45.0 | 3.58e-01 | 89.8% | 95.0% |
| 4045926 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 45.0 | 4.08e-01 | 88.0% | 79.3% |
| 4042980 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 46.0 | 4.25e-01 | 91.7% | 84.8% |
| 5062546 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.55 | 44.0 | 4.03e-01 | 88.0% | 72.7% |
| 5022963 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.55 | 44.0 | 4.14e-01 | 88.0% | 79.3% |
| 4410112 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.55 | 45.0 | 4.12e-01 | 89.8% | 68.3% |
| 3347151 | 7579.1.1.37 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1749 | 0.55 | 45.0 | 3.28e-01 | 89.8% | 83.6% |
| 3603572 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.55 | 45.0 | 4.17e-01 | 89.8% | 79.3% |
| 3972237 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.55 | 46.0 | 4.27e-01 | 90.7% | 86.7% |
| 4938634 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 42.0 | 4.22e-01 | 82.4% | 86.4% |
| 4957763 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.54 | 48.0 | 4.24e-01 | 100.0% | 100.0% |
| 4305868 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 47.0 | 4.41e-01 | 96.3% | 89.6% |
| 4995477 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 44.0 | 4.25e-01 | 89.8% | 88.0% |
| 5043814 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 45.0 | 4.42e-01 | 91.7% | 93.9% |
| 3349431 | 7512.1.1.66 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Exostosin_GT47 | 0.54 | 42.0 | 3.01e-01 | 82.4% | 88.1% |
| 4144970 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 44.0 | 4.08e-01 | 88.0% | 81.5% |
| 5080923 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 44.0 | 3.98e-01 | 89.8% | 72.0% |
| 3940369 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.54 | 44.0 | 4.02e-01 | 89.8% | 98.6% |
| 4140737 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 43.0 | 4.04e-01 | 88.0% | 79.3% |
| 4982394 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.54 | 45.0 | 4.22e-01 | 95.4% | 81.4% |
| 4516450 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.53 | 43.0 | 4.05e-01 | 90.7% | 84.3% |
| 5066099 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.53 | 44.0 | 3.84e-01 | 92.6% | 100.0% |
| 4943357 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 45.0 | 3.67e-01 | 95.4% | 96.3% |
| 3386936 | 2007.1.2.45 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › GD_AH_second | 0.53 | 44.0 | 4.27e-01 | 93.5% | 96.0% |
| 5035030 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.53 | 43.0 | 4.14e-01 | 89.8% | 87.2% |
| 4933239 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.53 | 44.0 | 4.14e-01 | 92.6% | 85.9% |
| 4987947 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.53 | 42.0 | 4.13e-01 | 86.1% | 86.7% |
| 4528268 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.53 | 43.0 | 4.08e-01 | 91.7% | 89.6% |
| 4037633 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.52 | 44.0 | 3.67e-01 | 93.5% | 85.5% |
| 4953344 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 42.0 | 3.99e-01 | 89.8% | 81.5% |
| 4671589 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 43.0 | 4.08e-01 | 92.6% | 89.6% |
| 3664932 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.52 | 43.0 | 3.05e-01 | 90.7% | 86.2% |
| 5044663 | 7575.1.1.11 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 | 0.52 | 44.0 | 3.53e-01 | 96.3% | 83.3% |
| 4277518 | 7563.1.1.4 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › YpsA | 0.52 | 38.0 | 3.28e-01 | 78.7% | 90.7% |
| 4482853 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.52 | 42.0 | 3.89e-01 | 89.8% | 80.0% |
| 5073925 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.52 | 44.0 | 3.94e-01 | 95.4% | 86.5% |
| 4932818 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.51 | 41.0 | 3.91e-01 | 88.9% | 82.3% |
| 3255931 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 41.0 | 3.50e-01 | 90.7% | 98.4% |
| 4936400 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.50 | 40.0 | 4.04e-01 | 88.0% | 93.6% |
D3
medium
residues 91-242
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zdbA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.61 | 34.0 | 4.30e-01 | 82.9% | 93.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4512554 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 69.0 | 6.44e-01 | 100.0% | 79.5% |
| 4148057 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.74 | 68.0 | 6.40e-01 | 100.0% | 96.2% |
| 4302460 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.74 | 67.0 | 6.46e-01 | 100.0% | 86.5% |
| 4321047 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 66.0 | 6.29e-01 | 98.7% | 83.9% |
| 4270770 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 66.0 | 6.21e-01 | 100.0% | 81.1% |
| 4074538 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.73 | 67.0 | 6.25e-01 | 100.0% | 85.3% |
| 4128948 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.73 | 66.0 | 6.30e-01 | 100.0% | 84.0% |
| 4061313 | 102.1.1.82 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_5 | 0.73 | 67.0 | 6.30e-01 | 100.0% | 86.5% |
| 4199126 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.73 | 67.0 | 6.34e-01 | 100.0% | 85.6% |
| 3186716 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.54 | 43.0 | 2.80e-01 | 84.9% | 62.3% |
| 3735016 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.52 | 44.0 | 2.90e-01 | 92.8% | 62.8% |