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N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00261
Bact-VirN5_271_007G1_scaffold_5_prodigal-single.1__X__X__00261
Identity
- Kingdom:
- phage
Quality
61.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-112
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 50.0 | 4.30e-01 | 87.3% | 90.4% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 51.0 | 4.17e-01 | 87.3% | 89.3% |
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.64 | 34.0 | 4.38e-01 | 84.8% | 100.0% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.63 | 44.0 | 3.63e-01 | 72.2% | 72.3% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 43.0 | 3.77e-01 | 97.5% | 49.6% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.60 | 42.0 | 3.91e-01 | 74.7% | 81.4% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 32.0 | 3.39e-01 | 89.9% | 60.3% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 3.12e-01 | 98.7% | 35.6% |
| 1q47A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 3.10e-01 | 98.7% | 27.3% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 34.0 | 3.13e-01 | 91.1% | 44.8% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 40.0 | 2.80e-01 | 75.9% | 73.6% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 41.0 | 3.23e-01 | 81.0% | 86.6% |
| 3j7aV00 | 2.40.50.1000 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 41.0 | 3.35e-01 | 78.5% | 69.9% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 34.0 | 3.17e-01 | 89.9% | 47.0% |
| 3thxA02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.55 | 37.0 | 2.93e-01 | 96.2% | 33.9% |
| 5ocqA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 2.98e-01 | 86.1% | 44.3% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 41.0 | 3.72e-01 | 91.1% | 58.7% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.54 | 40.0 | 3.25e-01 | 83.5% | 41.1% |
| 1ni9A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.54 | 45.0 | 3.80e-01 | 100.0% | 96.0% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 37.0 | 3.02e-01 | 70.9% | 87.9% |
| 2pwwA00 | 3.30.310.100 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like | 0.54 | 43.0 | 3.83e-01 | 88.6% | 65.2% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 37.0 | 3.16e-01 | 73.4% | 43.6% |
| 4kc3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.91e-01 | 97.5% | 69.5% |
| 4gafB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.54e-01 | 87.3% | 58.5% |
| 2i52B00 | 3.30.1300.20 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) | 0.53 | 44.0 | 3.95e-01 | 96.2% | 93.1% |
| 3bcyA00 | 3.40.1000.40 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 | 0.52 | 41.0 | 3.51e-01 | 91.1% | 84.2% |
| 4depC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.56e-01 | 93.7% | 61.8% |
| 4ydzA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.49e-01 | 89.9% | 52.6% |
| 2mc8A00 | 3.10.450.590 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 39.0 | 3.43e-01 | 81.0% | 84.2% |
| 5dstA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 38.0 | 3.02e-01 | 82.3% | 97.2% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 35.0 | 2.72e-01 | 73.4% | 59.6% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.50 | 31.0 | 3.66e-01 | 86.1% | 100.0% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 39.0 | 2.98e-01 | 84.8% | 37.9% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.56e-01 | 89.9% | 79.3% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 39.0 | 2.61e-01 | 87.3% | 82.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055710 | 4985.1.1.0 ↗ | few secondary structure elements › DPY module › DPY module › DPY module | 0.81 | 41.0 | 5.56e-01 | 88.6% | 97.5% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.72 | 51.0 | 4.46e-01 | 74.7% | 76.7% |
| 3188712 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.70 | 48.0 | 4.46e-01 | 72.2% | 92.0% |
| 3925865 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.67 | 47.0 | 4.06e-01 | 72.2% | 69.2% |
| 3410286 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 44.0 | 4.13e-01 | 70.9% | 75.8% |
| 3484671 | 3433.1.1.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain | 0.64 | 35.0 | 4.18e-01 | 86.1% | 84.0% |
| 3488610 | 383.1.2.0 ↗ | few secondary structure elements › Defensin-like › Defensin-related › Laterosporulin | 0.63 | 34.0 | 4.28e-01 | 83.5% | 100.0% |
| 3393619 | 284.4.1.2 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › PF28923 | 0.63 | 33.0 | 3.95e-01 | 88.6% | 78.0% |
| 4953347 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.63 | 32.0 | 3.81e-01 | 89.9% | 74.0% |
| 5032125 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 35.0 | 2.43e-01 | 92.4% | 16.5% |
| 3704604 | 4086.1.1.1 ↗ | a+b two layers › AMPKBI-like › AMPKBI-like › AMPKBI-like › AMPKBI | 0.61 | 31.0 | 2.88e-01 | 87.3% | 36.0% |
| 4959998 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 35.0 | 3.21e-01 | 94.9% | 43.8% |
| 4999755 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 36.0 | 3.01e-01 | 100.0% | 34.0% |
| 4960002 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 35.0 | 3.37e-01 | 94.9% | 52.2% |
| 4026900 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.57 | 48.0 | 4.28e-01 | 94.9% | 99.1% |
| 2447618 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.57 | 50.0 | 3.43e-01 | 98.7% | 57.7% |
| 5014292 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 34.0 | 3.99e-01 | 82.3% | 94.0% |
| 3572164 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 41.0 | 3.85e-01 | 88.6% | 66.3% |
| 3560029 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.93e-01 | 88.6% | 68.4% |
| 4946325 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 38.0 | 3.52e-01 | 74.7% | 67.6% |
| 3675483 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 40.0 | 2.53e-01 | 77.2% | 33.8% |
| 3569641 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.85e-01 | 88.6% | 67.4% |
| 4483219 | 881.5.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Respiratory growth induced protein 1 › Respiratory growth induced protein 1 › RGI1 | 0.54 | 42.0 | 3.56e-01 | 88.6% | 84.1% |
| 3939374 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 2.77e-01 | 84.8% | 34.7% |
| 5005723 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 44.0 | 3.14e-01 | 100.0% | 37.5% |
| 3782947 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 37.0 | 3.31e-01 | 75.9% | 51.7% |
| 4056691 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 39.0 | 3.49e-01 | 82.3% | 55.0% |
| 5074323 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.51 | 39.0 | 3.50e-01 | 82.3% | 58.3% |
| 1559028 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 40.0 | 3.49e-01 | 89.9% | 52.6% |
| 3937910 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 36.0 | 3.52e-01 | 75.9% | 68.2% |
| 3169095 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.51 | 42.0 | 4.10e-01 | 87.3% | 81.2% |
| 3421524 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 39.0 | 2.52e-01 | 83.5% | 22.0% |
| 4034488 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 41.0 | 3.54e-01 | 93.7% | 63.0% |
| 3409717 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.50 | 39.0 | 2.76e-01 | 83.5% | 54.0% |
| 3728137 | 2003.1.3.35 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FMO-like, DAO | 0.50 | 40.0 | 2.45e-01 | 86.1% | 77.6% |