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NAD-dependent_DNA_ligase

Euk-Vir

Choristoneura_biennis_entomopoxvirus

NAD-dependent_DNA_ligase__YP_008004300__Choristoneura_biennis_entomopoxvirus__10288

Identity

Accession:
YP_008004300 ↗
Protein ID:
NAD-dependent_DNA_ligase
Kingdom:
euk

Quality

84.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Betaentomopoxvirus› Choristoneura_biennis_entomopoxvirus

TaxID: 10288

Cluster

View cluster (18 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-75
PDB
Domain cluster: rep: NAD-dependent_DNA_ligase__YP_008004602__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D1-71
D2 high residues 293-385
PDB
Domain cluster: rep: LC680885.1__BDE75744.1__X__00206__D318-424
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03120.23 best OB_DNA_ligase 35.2 1.40e-08 82.8% 93.7%
D3 medium residues 76-117_231-288
PDB
Domain cluster: rep: ON649702__UVF62572.1__X__00095__D231-262_382-434
D4 medium residues 118-230
PDB
Domain cluster: rep: DNA_polymerase_X_NAD-dependent_DNA_ligase_fusion_protein__YP_009173744__Chrysochromulina_ericina_virus__455364__D566-656
D5 medium residues 390-529
PDB
Domain cluster: rep: NAD-dependent_DNA_ligase__YP_010084817__Shrimp_hemocyte_iridescent_virus__2039780__D372-518