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NC_000929.1__NP_050639.1__Mup35__00035

Bact-Vir

NC_000929.1__NP_050639.1__Mup35__00035

Identity

Accession:
NC_000929 ↗
Kingdom:
phage

Quality

73.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Muvirus› Escherichia_phage_Mu

TaxID: 2681603

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-66
PDB
Domain cluster: rep: KT381864.1__ALF02055.1__vBThpSP1_016__00016__D76-126
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17891.7 best FluMu_N 42.3 6.50e-11 94.0% 73.5%
D2 high residues 84-135
PDB
Domain cluster: rep: MZ911962.1__WNV45434.1__X__00032__D4-47
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.04e-01 100.0% 54.7%
2i6xA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 57.0 5.13e-01 100.0% 83.1%
4jb3A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 56.0 5.08e-01 100.0% 86.1%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 54.0 3.69e-01 100.0% 26.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 49.0 4.04e-01 100.0% 46.6%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.29e-01 100.0% 71.3%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 51.0 4.77e-01 96.2% 95.5%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.60 49.0 4.25e-01 100.0% 91.5%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.46e-01 100.0% 70.4%
6teyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.44e-01 96.2% 89.0%
1dqeA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.57 45.0 3.53e-01 98.1% 90.5%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 44.0 4.30e-01 100.0% 88.3%
2zg6A02 1.10.150.660 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.53 42.0 3.95e-01 98.1% 87.5%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3267780 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.74 48.0 3.02e-01 75.0% 12.5%
3715972 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 4.21e-01 100.0% 27.0%
2705 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.73 59.0 5.06e-01 100.0% 55.3%
3689715 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 58.0 5.55e-01 100.0% 81.7%
4011519 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 57.0 5.51e-01 100.0% 85.0%
3191621 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 52.0 5.22e-01 100.0% 89.1%
3369798 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.66 56.0 4.84e-01 100.0% 71.8%
4236937 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.64 52.0 4.96e-01 94.2% 78.3%
2807714 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 53.0 4.36e-01 100.0% 71.3%
3725287 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.56e-01 100.0% 62.4%
3184003 101.1.1.216 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_8 0.61 49.0 4.94e-01 100.0% 94.5%
3223404 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 48.0 3.72e-01 100.0% 43.6%
4388318 161.1.1.1 ↗ alpha complex topology › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA › SecA_SW 0.59 47.0 3.17e-01 92.3% 26.0%
5027756 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 46.0 4.66e-01 100.0% 94.0%
4011227 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 46.0 4.39e-01 96.2% 78.5%
2774099 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.55 45.0 3.07e-01 100.0% 83.9%
3478379 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.55 42.0 3.05e-01 86.5% 49.1%
4061700 101.1.1.312 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Ustilago_mating, Homeobox_KN 0.55 45.0 3.38e-01 98.1% 46.2%
3710714 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.52 41.0 3.73e-01 86.5% 92.9%
4980496 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.51 42.0 3.18e-01 100.0% 37.3%
5010377 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.51 35.0 3.24e-01 94.2% 52.9%