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NC_001884.1__NP_046562.1__SPBc2p010__00010

Bact-Vir

NC_001884.1__NP_046562.1__SPBc2p010__00010

Identity

Accession:
NC_001884 ↗
Kingdom:
phage

Quality

96.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPBc2

TaxID: 2932878

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-157
PDB
Domain cluster: rep: LC667451.1__BDD79615.1__X__00096__D59-246
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09346.16 best SMI1_KNR4 44.1 4.30e-11 70.3% 86.3%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d5pA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.78 62.0 6.68e-01 88.4% 96.2%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.66 56.0 5.37e-01 91.0% 97.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4291633 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.75 64.0 6.32e-01 90.3% 97.6%
3974122 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.74 51.0 5.99e-01 74.8% 99.1%
3389477 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.72 66.0 6.19e-01 96.8% 90.8%
4162535 4205.1.1.5 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SUKH_6 0.72 64.0 6.58e-01 98.1% 99.3%
3959688 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.70 53.0 5.74e-01 78.1% 100.0%
3838634 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.69 54.0 5.95e-01 85.2% 100.0%
3205261 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.68 60.0 5.72e-01 92.9% 97.2%
4525958 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.63 37.0 4.33e-01 91.6% 82.4%
3298629 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.62 58.0 5.52e-01 100.0% 97.2%
3997090 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.62 37.0 4.25e-01 91.0% 79.1%
4601943 4194.1.1.2 ↗ a+b duplicates or obligate multimers › Prenyltransferase-like › Prenyltransferase-like › Prenyltransferase-like › Trp_DMAT 0.52 46.0 3.35e-01 96.1% 89.1%