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NC_001884.1__NP_046582.1SPBc2p03000030

Bact-Vir

NC_001884.1__NP_046582.1__SPBc2p030__00030

Identity

Accession:: NC_001884 ↗
Kingdom:: phage

Quality

82.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_SPBc2

TaxID: 2932878

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-108

PDB

Domain cluster: rep: NC_071049.1__YP_010681510.1__PQE75_gp217__00130__D15-105

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24049.2 best	YOMG_N	101.9	2.20e-29	90.8%	100.0%

D2 high residues 193-214_425-488

PDB

Domain cluster: rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692

CATH (44)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wruA01	2.30.300.10	Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold	0.82	73.0	5.66e-01	100.0%	46.9%
3cddA01	2.30.300.10	Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold	0.81	68.0	5.23e-01	100.0%	42.4%
3d37B01	2.30.300.10	Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold	0.77	71.0	5.55e-01	100.0%	49.4%
3kyfA02	2.40.10.220	Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains	0.73	60.0	5.40e-01	100.0%	65.0%
1k28D03	2.40.30.150	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3	0.72	66.0	6.42e-01	100.0%	94.7%
2p5zX01	2.30.110.50	Mainly Beta › Roll › Pnp Oxidase; Chain A ›	0.69	60.0	4.80e-01	97.7%	48.8%
4p02A03	2.40.10.220	Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains	0.66	57.0	5.03e-01	94.2%	67.2%
3lnnA02	2.40.30.170	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain	0.65	52.0	5.11e-01	96.5%	79.6%
3iuwA00	2.30.130.30	Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein.	0.64	53.0	5.51e-01	100.0%	97.5%
3fgeA01	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.63	56.0	4.48e-01	98.8%	70.3%
1ep3B01	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.63	47.0	4.51e-01	95.3%	68.7%
3cnrB00	2.40.10.220	Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains	0.63	51.0	4.96e-01	96.5%	79.6%
2w7vA00	3.30.1360.100	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM	0.63	46.0	4.72e-01	95.3%	81.7%
2vgmA01	2.30.30.870	Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A	0.62	43.0	3.83e-01	100.0%	50.0%
2xzmP00	3.30.70.3370	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.62	48.0	4.05e-01	89.5%	48.6%
2x8kA01	2.40.30.200	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.62	54.0	5.08e-01	98.8%	83.8%
3cr8A01	3.10.400.10	Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase	0.61	55.0	4.62e-01	98.8%	74.5%
5ygbA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.61	39.0	4.02e-01	94.2%	70.0%
2gksB01	3.10.400.10	Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase	0.59	53.0	4.50e-01	98.8%	90.8%
2r4fA02	3.90.770.10	Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2	0.58	51.0	3.88e-01	97.7%	57.8%
2l25A00	3.30.2000.20	Alpha Beta › 2-Layer Sandwich › STM4215-like ›	0.58	50.0	4.33e-01	98.8%	90.1%
2fg9A01	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.57	50.0	4.12e-01	98.8%	72.3%
2ra1A04	2.60.40.1220	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.57	39.0	3.80e-01	88.4%	62.9%
3n9xA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.56	46.0	3.80e-01	91.9%	50.0%
1t7vA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.56	41.0	4.05e-01	88.4%	72.2%
1tu1A00	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.56	46.0	3.83e-01	87.2%	69.4%
3sz6A00	2.60.40.1850	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	45.0	4.08e-01	93.0%	64.7%
2vz6B01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.56	43.0	4.39e-01	91.9%	86.7%
4o2zA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.55	46.0	3.84e-01	93.0%	52.3%
3bfmA01	3.30.930.10	Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2	0.55	44.0	3.46e-01	86.0%	52.0%
5kbzB00	3.10.129.110	Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase	0.55	46.0	3.14e-01	93.0%	34.9%
2pfcA00	3.10.129.30	Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain	0.54	45.0	3.76e-01	93.0%	71.2%
1m4zA01	2.30.30.490	Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain	0.54	45.0	3.44e-01	89.5%	59.2%
3zduA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.54	38.0	4.02e-01	91.9%	84.2%
3lydA01	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.54	42.0	3.57e-01	83.7%	70.4%
2lnjA00	3.40.1000.10	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich	0.53	45.0	3.61e-01	93.0%	63.5%
6vbkA01	2.30.130.40	Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like	0.53	46.0	4.27e-01	100.0%	79.3%
3esiA00	3.10.129.10	Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase	0.53	45.0	4.02e-01	95.3%	94.4%
5gxuB01	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.52	39.0	3.56e-01	97.7%	58.2%
3fz2A00	3.30.70.1700	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U	0.52	43.0	3.88e-01	96.5%	93.0%
2v9kA04	3.30.70.3190	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.52	39.0	3.69e-01	82.6%	81.7%
2dt9A01	3.30.70.260	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain	0.52	34.0	3.59e-01	89.5%	78.4%
4binA01	2.60.40.3500	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.51	42.0	3.86e-01	97.7%	68.1%
5hesA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.50	35.0	3.60e-01	91.9%	76.5%

ECOD (68)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4031753	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.84	72.0	6.95e-01	100.0%	82.1%
4033372	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.82	76.0	6.91e-01	98.8%	78.2%
5041375	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.81	71.0	7.04e-01	100.0%	88.9%
3945543	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.79	68.0	6.91e-01	100.0%	92.9%
4647050	1.1.13.56 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ	0.79	65.0	6.74e-01	100.0%	95.0%
3589736	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.79	53.0	5.76e-01	75.6%	84.3%
4033714	1.1.13.7 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail	0.77	70.0	6.79e-01	100.0%	89.5%
3590379	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.77	71.0	7.00e-01	100.0%	95.6%
3972102	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.76	68.0	6.42e-01	100.0%	82.0%
3973341	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.76	68.0	6.83e-01	100.0%	96.5%
4929759	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.74	68.0	5.46e-01	100.0%	98.1%
3974181	1.1.5.88 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489	0.71	57.0	5.63e-01	100.0%	81.1%
4988102	1.1.13.47 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like	0.71	63.0	5.78e-01	96.5%	93.6%
5012011	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.70	58.0	5.14e-01	96.5%	62.4%
2137681	1.1.5.25 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ	0.69	56.0	5.12e-01	97.7%	67.9%
4954551	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.69	63.0	5.36e-01	100.0%	80.7%
3588729	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.69	63.0	6.08e-01	98.8%	97.9%
3981654	1.1.13.40 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail	0.69	61.0	5.66e-01	100.0%	98.2%
3941539	1.1.13.40 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail	0.68	58.0	5.49e-01	94.2%	98.1%
4608778	1.1.7.107 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965	0.67	53.0	4.74e-01	95.3%	60.8%
3315975	1.1.7.47 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd	0.67	58.0	4.59e-01	95.3%	72.6%
3289340	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.66	48.0	5.02e-01	95.3%	82.5%
3290365	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.66	50.0	4.49e-01	100.0%	58.3%
3219406	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.66	37.0	4.66e-01	95.3%	96.0%
3257085	1.1.7.47 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd	0.65	57.0	4.48e-01	95.3%	70.9%
5064178	1.1.13.73 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PUA	0.65	43.0	5.02e-01	80.2%	98.3%
3643150	304.8.1.0 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like	0.64	43.0	4.38e-01	86.0%	69.4%
373012	1.1.9.14 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850	0.64	53.0	5.48e-01	100.0%	96.2%
3190301	1.1.7.47 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd	0.64	55.0	4.54e-01	95.3%	71.0%
3299946	1.1.7.81 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel	0.64	54.0	4.89e-01	97.7%	69.6%
3247776	11.1.1.1038 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SIBA-E_N, Ig_SIBA-E_2nd	0.63	50.0	3.74e-01	88.4%	35.2%
3844943	11.1.1.117 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind	0.63	47.0	4.60e-01	90.7%	72.6%
3216034	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.62	51.0	4.27e-01	89.5%	54.7%
4967745	1.1.9.56 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30793	0.62	49.0	4.53e-01	98.8%	67.3%
5009401	304.165.1.0 ↗	a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207	0.61	46.0	4.00e-01	96.5%	51.1%
2582102	3338.2.1.2 ↗	a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin	0.61	43.0	3.83e-01	98.8%	49.6%
4950782	1.1.9.0 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain	0.61	50.0	4.39e-01	100.0%	60.0%
4232299	239.1.1.3 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p	0.61	53.0	5.19e-01	97.7%	100.0%
4323001	239.1.1.3 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p	0.61	53.0	5.10e-01	98.8%	98.0%
3227251	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.60	51.0	4.66e-01	97.7%	70.4%
3518863	221.1.2.16 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C	0.59	42.0	3.98e-01	74.4%	97.1%
4597893	239.1.1.3 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p	0.59	51.0	4.94e-01	98.8%	97.0%
4089549	239.1.1.3 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p	0.59	51.0	5.03e-01	98.8%	100.0%
3224730	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.59	51.0	4.72e-01	95.3%	76.4%
3626966	1.1.7.90 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1	0.59	49.0	4.60e-01	97.7%	73.6%
3648911	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.58	45.0	3.50e-01	91.9%	36.5%
4452931	239.1.1.3 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p	0.58	50.0	4.79e-01	100.0%	95.2%
4246654	239.1.1.3 ↗	beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p	0.58	51.0	4.86e-01	100.0%	96.0%
2595266	241.1.1.6 ↗	a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN	0.57	41.0	3.59e-01	91.9%	48.9%
4003057	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.57	46.0	4.24e-01	88.4%	69.4%
3891158	1.1.7.90 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1	0.56	47.0	4.33e-01	97.7%	70.4%
4382398	222.1.1.0 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase	0.56	47.0	3.99e-01	91.9%	80.7%
4065994	222.1.1.0 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase	0.56	46.0	3.86e-01	91.9%	74.7%
3224480	1207.1.1.1 ↗	a+b two layers › MTHFR SAM-binding regulatory domain › MTHFR SAM-binding regulatory domain › MTHFR SAM-binding regulatory domain › MTHFR_C	0.55	47.0	3.23e-01	93.0%	51.0%
3991271	1.1.9.33 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_NSUN2	0.55	39.0	4.10e-01	95.3%	81.2%
3306024	304.8.1.0 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like	0.54	45.0	4.20e-01	91.9%	71.8%
4944962	331.1.1.0 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like	0.54	39.0	3.73e-01	88.4%	65.0%
3569205	11.1.1.419 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3694	0.54	43.0	3.33e-01	87.2%	47.0%
3997443	304.9.1.0 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD	0.54	42.0	4.46e-01	96.5%	96.0%
3253616	11.1.1.843 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034	0.54	48.0	3.74e-01	98.8%	65.9%
4190241	12.1.1.44 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C	0.53	45.0	4.17e-01	94.2%	90.0%
3676777	212.1.1.12 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › UPF0029	0.53	42.0	3.65e-01	87.2%	64.4%
3321290	11.1.1.902 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N	0.52	42.0	3.84e-01	88.4%	67.8%
5041394	225.1.1.0 ↗	a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	0.52	45.0	3.71e-01	96.5%	59.4%
3704061	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.51	42.0	2.77e-01	91.9%	87.0%
5045631	212.1.1.20 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Fae	0.51	40.0	3.27e-01	87.2%	62.3%
3968836	11.1.1.1153 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2169	0.51	43.0	3.77e-01	91.9%	70.4%
5030026	242.1.1.7 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3	0.50	39.0	3.86e-01	100.0%	82.2%

D3 high residues 542-647

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24058.2 best	DUF7359	166.2	3.70e-49	100.0%	85.4%

CATH (83)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2geeA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.88	62.0	6.67e-01	100.0%	83.5%
3tesA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.86	60.0	6.36e-01	100.0%	79.8%
3r8qA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.86	59.0	6.36e-01	100.0%	82.2%
2ee2A01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.85	60.0	6.59e-01	100.0%	88.5%
1fnfA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.85	59.0	6.45e-01	100.0%	85.4%
2ekjA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.84	59.0	5.94e-01	100.0%	72.4%
3r8qA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.83	57.0	6.14e-01	100.0%	81.5%
3l5iA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.83	58.0	6.34e-01	99.1%	86.4%
3b83C00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.82	57.0	5.90e-01	100.0%	75.8%
1x5hA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.82	61.0	5.64e-01	100.0%	62.1%
1fnfA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	59.0	6.27e-01	100.0%	84.0%
3t1wA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	57.0	6.15e-01	100.0%	83.7%
4n5uA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	62.0	6.16e-01	100.0%	76.9%
3wihA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	55.0	6.08e-01	100.0%	84.1%
1x4yA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	61.0	6.30e-01	100.0%	82.2%
1x5lA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	57.0	6.25e-01	100.0%	87.5%
3l5hA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.81	57.0	6.60e-01	100.0%	100.0%
1wfoA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.80	59.0	5.96e-01	100.0%	76.9%
2cuhA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.80	54.0	5.85e-01	100.0%	83.0%
1x5kA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.80	60.0	6.16e-01	100.0%	82.2%
6mfaA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.80	51.0	5.86e-01	91.5%	87.3%
8bvoA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.79	55.0	6.12e-01	93.4%	88.4%
8afoA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.79	57.0	6.23e-01	100.0%	89.8%
5e55B02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.79	60.0	6.37e-01	100.0%	89.2%
2h41A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.79	57.0	6.04e-01	96.2%	83.2%
7y8sA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	61.0	6.40e-01	100.0%	89.5%
2ee3A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	54.0	5.42e-01	100.0%	69.4%
1iarB02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	55.0	5.91e-01	100.0%	83.7%
5e53A02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	59.0	6.29e-01	100.0%	89.2%
7zxkB02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	59.0	6.26e-01	100.0%	88.2%
2edyA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	56.0	5.73e-01	100.0%	76.7%
1f6fB02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.78	57.0	6.00e-01	100.0%	83.5%
2v5yA05	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.77	57.0	6.00e-01	100.0%	83.5%
5utkA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.77	55.0	5.97e-01	100.0%	87.8%
1uenA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.76	61.0	5.77e-01	100.0%	71.2%
1x5xA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.76	55.0	5.45e-01	100.0%	72.5%
5eh1A02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.76	56.0	5.92e-01	100.0%	85.3%
1n26A03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.76	58.0	5.85e-01	100.0%	80.8%
2crmA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.75	53.0	6.05e-01	99.1%	98.7%
2dbjA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.75	57.0	5.65e-01	100.0%	77.1%
1uc6A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.75	57.0	5.64e-01	100.0%	77.1%
1axiB02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.74	59.0	6.09e-01	100.0%	88.1%
1wisA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.74	56.0	5.71e-01	100.0%	83.2%
5u8rA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.74	62.0	6.24e-01	100.0%	88.0%
2cuiA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.74	56.0	5.52e-01	100.0%	75.0%
6x3aA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.72	61.0	6.17e-01	100.0%	90.4%
2v5yA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.72	55.0	5.63e-01	100.0%	83.3%
3lsoA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.71	51.0	5.46e-01	100.0%	85.9%
3og6B02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.71	52.0	5.41e-01	100.0%	82.8%
5mj3A03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.70	49.0	5.36e-01	100.0%	88.5%
4nzdB02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.68	55.0	5.54e-01	100.0%	84.4%
3obaA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.66	61.0	5.74e-01	100.0%	88.9%
2yeqA01	2.60.40.380	Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal	0.66	52.0	5.15e-01	84.9%	80.7%
7k7jA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.64	56.0	5.65e-01	100.0%	93.5%
5h4zA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.63	53.0	4.98e-01	100.0%	74.4%
2z0uA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.62	53.0	5.00e-01	100.0%	77.3%
5dcaA08	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.62	51.0	5.13e-01	100.0%	87.3%
5mj6A03	2.60.40.1910	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.62	41.0	4.68e-01	85.8%	91.3%
2cm5A00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.62	51.0	4.62e-01	100.0%	66.4%
3c8dA01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.61	54.0	5.07e-01	98.1%	78.5%
5z06A01	2.60.120.430	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin	0.61	48.0	4.14e-01	86.8%	99.4%
2bwqA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.60	49.0	4.72e-01	100.0%	77.0%
2b3rA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.60	49.0	4.73e-01	100.0%	78.2%
4wz9A03	2.60.40.1910	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.60	44.0	4.77e-01	85.8%	93.2%
2ivfC00	2.60.40.1190	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.59	52.0	4.20e-01	100.0%	67.8%
5m59A06	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.57	48.0	4.80e-01	100.0%	88.4%
3fmgA02	2.60.120.800	Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2	0.57	40.0	4.40e-01	82.1%	89.7%
3fbkA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.57	47.0	4.33e-01	100.0%	68.8%
4qhpA04	2.60.40.1840	Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain	0.57	46.0	4.73e-01	100.0%	91.1%
3fq4B01	2.60.40.2030	Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain	0.57	46.0	4.53e-01	87.7%	81.9%
2dpkA01	2.60.40.2030	Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain	0.57	49.0	4.76e-01	100.0%	83.3%
5jtwA03	2.60.40.1940	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	50.0	4.74e-01	100.0%	86.6%
3e9tB00	2.60.40.2030	Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain	0.56	46.0	4.52e-01	87.7%	82.3%
4uzgA01	2.60.40.740	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	48.0	4.23e-01	94.3%	93.6%
3b34A04	2.60.40.1840	Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain	0.55	45.0	4.60e-01	100.0%	91.2%
2kltA00	2.60.40.2030	Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain	0.55	49.0	4.34e-01	100.0%	82.1%
1df0A03	2.60.120.380	Mainly Beta › Sandwich › Jelly Rolls ›	0.54	49.0	4.54e-01	99.1%	85.8%
2x9zA02	2.60.40.1140	Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain	0.54	47.0	4.59e-01	92.5%	87.6%
4yhbA01	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.53	43.0	4.06e-01	89.6%	90.7%
3ufiA02	2.60.40.2630	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.53	40.0	3.79e-01	80.2%	67.2%
2okxA02	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.52	42.0	3.61e-01	86.8%	60.0%
2izwC00	2.60.120.20	Mainly Beta › Sandwich › Jelly Rolls ›	0.52	41.0	3.38e-01	87.7%	65.9%
7o0eA02	2.60.40.1180	Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II	0.51	38.0	4.22e-01	83.0%	100.0%

ECOD (100)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3879246	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.85	63.0	6.63e-01	100.0%	85.3%
3505727	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.84	61.0	6.99e-01	99.1%	100.0%
4981506	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.83	64.0	6.57e-01	100.0%	84.0%
3762665	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.83	59.0	5.12e-01	100.0%	50.3%
3569194	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.82	59.0	5.95e-01	100.0%	74.3%
3526658	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.81	58.0	5.57e-01	100.0%	65.0%
3223734	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.81	60.0	6.19e-01	100.0%	81.0%
3481765	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.81	68.0	6.39e-01	100.0%	74.4%
3495343	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.81	58.0	5.90e-01	100.0%	75.2%
4124695	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.80	60.0	6.47e-01	88.7%	91.1%
3490017	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.80	69.0	6.74e-01	100.0%	84.3%
4209418	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.80	59.0	6.22e-01	100.0%	85.3%
3923079	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.80	59.0	6.23e-01	98.1%	85.3%
3501845	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.79	64.0	6.35e-01	100.0%	80.9%
3913835	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.79	63.0	6.08e-01	100.0%	74.2%
3495270	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.79	65.0	6.44e-01	100.0%	83.6%
3616256	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.79	59.0	5.82e-01	100.0%	74.5%
3224027	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.78	60.0	6.19e-01	100.0%	84.0%
3224575	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.78	57.0	6.18e-01	100.0%	88.9%
3622820	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.78	56.0	4.77e-01	100.0%	47.9%
3580998	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.78	56.0	5.81e-01	100.0%	79.0%
3912583	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.78	58.0	5.75e-01	100.0%	74.5%
3497033	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.78	61.0	4.48e-01	100.0%	33.2%
3569196	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.78	57.0	5.89e-01	100.0%	81.0%
3514250	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.77	61.0	6.02e-01	100.0%	79.1%
3765372	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.77	62.0	5.71e-01	100.0%	68.5%
3488856	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.77	68.0	6.07e-01	100.0%	70.0%
3503601	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.77	62.0	6.12e-01	100.0%	80.9%
3516884	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.77	60.0	6.08e-01	100.0%	82.9%
3487139	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.77	68.0	6.07e-01	100.0%	70.0%
4515092	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.77	63.0	6.22e-01	100.0%	82.7%
3856046	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.76	59.0	5.47e-01	100.0%	65.4%
3893459	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.76	56.0	5.97e-01	100.0%	85.3%
1521	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.76	61.0	5.77e-01	100.0%	71.2%
3394895	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.76	61.0	6.07e-01	100.0%	80.9%
3217735	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.76	72.0	6.20e-01	100.0%	80.0%
3618759	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.76	65.0	6.30e-01	100.0%	82.6%
3222665	11.1.1.859 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set, Ig_3	0.76	55.0	3.69e-01	100.0%	21.9%
3583299	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.76	60.0	6.07e-01	100.0%	83.8%
3511265	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.75	61.0	6.03e-01	100.0%	81.8%
3393960	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.75	61.0	6.07e-01	100.0%	81.8%
3413416	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.75	55.0	5.70e-01	100.0%	80.0%
3925350	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.75	60.0	5.86e-01	100.0%	77.4%
3901411	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.75	59.0	5.91e-01	100.0%	80.9%
3922399	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.74	62.0	5.80e-01	100.0%	73.6%
3791696	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.74	57.0	4.91e-01	100.0%	54.2%
3888005	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.74	61.0	6.09e-01	100.0%	83.6%
3884371	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.74	59.0	5.78e-01	100.0%	77.4%
3855572	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.74	60.0	5.52e-01	100.0%	68.1%
3022847	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.73	58.0	5.78e-01	100.0%	80.6%
3841982	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.73	60.0	6.01e-01	100.0%	84.5%
3756416	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.73	58.0	5.76e-01	100.0%	80.9%
3919532	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.73	59.0	5.87e-01	100.0%	82.7%
3486375	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.72	63.0	4.01e-01	100.0%	21.6%
4588326	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.72	68.0	6.18e-01	100.0%	89.6%
3931451	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.72	67.0	4.85e-01	100.0%	43.6%
3398840	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.71	57.0	5.74e-01	100.0%	83.8%
3881058	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.71	51.0	5.31e-01	100.0%	80.0%
3896959	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.71	52.0	5.32e-01	100.0%	80.0%
3481162	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.71	55.0	5.58e-01	100.0%	82.9%
3236983	11.1.1.804 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ANOS1	0.71	56.0	5.43e-01	100.0%	75.7%
3227387	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.70	66.0	6.10e-01	100.0%	85.4%
3879431	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.70	56.0	5.70e-01	100.0%	85.7%
3400271	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.69	62.0	5.92e-01	100.0%	84.2%
4162853	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.68	60.0	5.14e-01	100.0%	61.9%
3582089	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.67	58.0	5.62e-01	100.0%	84.3%
3484945	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.67	60.0	5.67e-01	100.0%	82.4%
3196193	11.1.1.213 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PhoD_N	0.66	53.0	4.82e-01	100.0%	64.3%
3891681	11.1.1.129 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind	0.66	52.0	4.85e-01	100.0%	67.7%
3905582	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.66	50.0	5.10e-01	100.0%	81.9%
3406565	11.1.1.2 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3	0.65	61.0	5.75e-01	100.0%	85.6%
3875679	11.1.1.896 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3, I-set	0.65	58.0	3.91e-01	95.3%	58.4%
3898917	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.63	51.0	4.66e-01	100.0%	65.7%
3476805	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.63	57.0	5.31e-01	100.0%	86.9%
3318082	11.1.1.872 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ENGASE1_C	0.63	54.0	4.83e-01	100.0%	66.7%
3276467	11.1.1.45 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63	0.63	51.0	5.11e-01	100.0%	85.5%
3487660	11.2.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain	0.62	47.0	4.18e-01	100.0%	56.1%
3844431	11.1.1.593 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS7_C	0.62	57.0	4.89e-01	100.0%	69.7%
3505571	11.2.1.6 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL	0.62	49.0	4.42e-01	84.9%	77.2%
3725190	10.32.1.237 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mid1	0.61	50.0	4.65e-01	87.7%	83.8%
3486808	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.60	54.0	3.99e-01	100.0%	38.9%
3546318	11.2.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain	0.60	51.0	4.46e-01	100.0%	61.9%
4969051	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.59	53.0	5.12e-01	100.0%	90.8%
3638461	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.59	54.0	4.95e-01	100.0%	80.7%
3420364	11.10.1.5 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2	0.59	48.0	4.35e-01	88.7%	97.9%
5038120	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.58	53.0	4.75e-01	100.0%	91.0%
3938201	11.1.1.41 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C	0.57	52.0	4.41e-01	99.1%	84.7%
3451106	11.10.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like	0.57	52.0	4.76e-01	100.0%	97.8%
4959334	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.57	47.0	4.68e-01	100.0%	87.3%
3241664	11.1.1.41 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C	0.56	44.0	3.87e-01	84.9%	84.8%
3195252	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.56	50.0	4.27e-01	100.0%	89.4%
3411287	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.55	47.0	4.51e-01	100.0%	82.5%
999477	11.1.4.22 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa_like_1	0.55	42.0	3.99e-01	83.0%	67.2%
3237965	11.2.1.1 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2	0.55	48.0	4.06e-01	100.0%	60.0%
3223826	11.1.1.41 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C	0.54	48.0	4.15e-01	99.1%	81.8%
4948087	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	48.0	4.55e-01	99.1%	100.0%
3740649	11.1.1.498 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LDB19	0.54	47.0	4.30e-01	100.0%	86.2%
3176380	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.54	41.0	3.51e-01	83.0%	64.4%
3404442	11.1.1.112 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1	0.53	47.0	4.28e-01	100.0%	81.4%
3247934	1.1.7.41 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom	0.52	39.0	4.13e-01	88.7%	91.6%

D4 high residues 778-873

PDB

Domain cluster: rep: KM983329.1__AJA42681.1__phiCT9441A_69__00068__D88-182

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24060.2 best	DUF7361	184.3	5.20e-55	99.0%	100.0%

CATH (40)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1tq5A01	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.65	46.0	4.47e-01	100.0%	65.7%
1cvrA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.61	42.0	4.47e-01	100.0%	83.1%
1pd6A00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.61	45.0	4.63e-01	97.9%	81.9%
4igbB02	2.60.40.740	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.60	49.0	4.31e-01	100.0%	59.4%
8shiI01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.60	48.0	4.70e-01	91.7%	79.8%
5xrkA00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.58	51.0	4.58e-01	100.0%	91.5%
4b60A01	2.60.40.1280	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.58	46.0	4.04e-01	100.0%	57.3%
4yarA02	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.58	44.0	4.01e-01	100.0%	61.8%
4gafB02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	44.0	4.27e-01	99.0%	72.6%
1m4kA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.58	44.0	4.40e-01	100.0%	79.6%
2gu9A01	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.57	45.0	4.38e-01	100.0%	76.7%
4awdB00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.57	50.0	3.61e-01	100.0%	63.4%
4p0dA02	2.60.40.740	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.57	49.0	4.12e-01	100.0%	55.3%
2zgoA00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.57	50.0	4.20e-01	100.0%	95.2%
4bfeC01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.56	48.0	4.69e-01	95.8%	85.8%
3v10A02	2.60.40.740	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	47.0	4.17e-01	100.0%	61.6%
1c1fA00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.55	47.0	4.27e-01	96.9%	93.3%
1stmA00	2.60.120.220	Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain	0.55	49.0	4.33e-01	100.0%	88.7%
4dzgA00	2.60.120.380	Mainly Beta › Sandwich › Jelly Rolls ›	0.55	49.0	4.68e-01	100.0%	86.7%
1lnsA04	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.54	47.0	3.88e-01	100.0%	87.1%
2mizA00	2.60.40.2900	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.54	48.0	4.11e-01	100.0%	80.1%
2if7A01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	44.0	4.35e-01	99.0%	83.7%
2orzA01	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.54	48.0	4.12e-01	100.0%	95.5%
4mloA01	2.60.120.810	Mainly Beta › Sandwich › Jelly Rolls ›	0.54	43.0	3.62e-01	100.0%	51.6%
4dxzA00	2.60.120.380	Mainly Beta › Sandwich › Jelly Rolls ›	0.53	48.0	4.58e-01	100.0%	87.4%
6sziB01	3.20.20.470	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glucansucrase	0.53	48.0	3.22e-01	100.0%	29.4%
2v31A01	2.40.30.180	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain	0.53	41.0	4.11e-01	100.0%	84.5%
5z6pA01	2.60.120.430	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin	0.53	45.0	3.78e-01	99.0%	94.9%
2c4xA02	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.53	46.0	4.00e-01	100.0%	96.8%
4g2sA00	2.60.200.20	Mainly Beta › Sandwich › Tumour Suppressor Smad4 ›	0.52	38.0	3.70e-01	76.0%	97.2%
5y4mA00	2.60.120.260	Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like	0.52	46.0	3.99e-01	100.0%	98.0%
2b5lB01	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.52	37.0	2.56e-01	76.0%	94.0%
3hpeA00	2.40.128.110	Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like	0.52	44.0	3.79e-01	97.9%	99.4%
1qu0C00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.52	44.0	3.65e-01	97.9%	77.0%
5h4cB00	2.60.120.40	Mainly Beta › Sandwich › Jelly Rolls ›	0.51	45.0	4.08e-01	100.0%	94.1%
1mkfA01	2.60.40.1330	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.51	44.0	3.58e-01	99.0%	61.3%
2df7A02	2.60.120.660	Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus	0.51	45.0	4.01e-01	100.0%	95.7%
1mkfA02	2.60.40.1340	Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like	0.51	44.0	3.72e-01	100.0%	93.0%
2vobB02	3.90.1720.10	Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme)	0.50	42.0	3.35e-01	100.0%	43.0%
4grhA00	3.60.120.10	Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase	0.50	40.0	2.68e-01	88.5%	37.9%

ECOD (43)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3401979	4081.1.1.5 ↗	beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N	0.69	53.0	4.00e-01	100.0%	35.5%
3978227	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.67	48.0	5.27e-01	100.0%	96.0%
3933157	11.1.1.1085 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_IRG7_N	0.65	45.0	4.52e-01	100.0%	70.0%
5043146	3386.1.1.0 ↗	beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related	0.64	56.0	5.68e-01	100.0%	96.8%
5040269	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.63	40.0	4.23e-01	100.0%	72.9%
3008973	11.1.5.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f	0.62	51.0	4.39e-01	100.0%	57.0%
4943639	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.61	47.0	4.95e-01	100.0%	92.9%
1070070	11.1.5.52 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Sgo0707_N2	0.61	50.0	4.32e-01	100.0%	57.8%
3485746	12.2.1.8 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556	0.60	45.0	4.11e-01	100.0%	59.2%
4339995	11.1.1.177 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FlgD_ig	0.60	44.0	4.66e-01	95.8%	87.1%
3580755	10.2.1.0 ↗	beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins)	0.58	51.0	4.46e-01	100.0%	94.7%
3653845	10.32.1.198 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2	0.57	50.0	4.23e-01	100.0%	91.2%
3231030	4081.1.1.7 ↗	beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I	0.57	45.0	3.63e-01	100.0%	43.2%
4951746	10.1.2.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED)	0.57	50.0	4.92e-01	99.0%	99.0%
3928299	10.1.1.17 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2	0.56	48.0	4.11e-01	100.0%	74.1%
4103741	10.32.1.19 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC	0.56	50.0	4.90e-01	100.0%	98.1%
4528208	10.4.1.0 ↗	beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain	0.56	41.0	4.46e-01	100.0%	93.8%
4199984	5.1.4.425 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR19_1st	0.56	40.0	2.83e-01	77.1%	91.3%
3476089	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.55	41.0	2.79e-01	81.2%	85.3%
3515797	5.1.4.6 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40	0.55	41.0	2.91e-01	79.2%	90.6%
3798352	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.54	39.0	2.76e-01	76.0%	86.1%
5046609	10.1.2.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED)	0.54	49.0	4.77e-01	100.0%	91.4%
3407569	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.54	40.0	2.81e-01	79.2%	92.6%
3800238	10.1.1.17 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2	0.54	46.0	3.60e-01	100.0%	70.4%
4063161	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.54	45.0	4.56e-01	100.0%	92.6%
3939610	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.53	40.0	2.88e-01	81.2%	93.5%
4025611	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.53	38.0	2.54e-01	77.1%	84.1%
3900462	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.53	47.0	4.54e-01	99.0%	100.0%
3788120	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.53	40.0	2.84e-01	82.3%	95.0%
2565054	10.12.1.65 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ToxT_N	0.53	43.0	3.58e-01	100.0%	50.3%
3619275	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.53	38.0	2.70e-01	76.0%	85.3%
2453133	12.1.1.2 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_70	0.53	48.0	4.08e-01	100.0%	68.4%
360238	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.53	47.0	3.87e-01	100.0%	96.1%
3408560	10.4.1.24 ↗	beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF26080	0.53	47.0	4.18e-01	99.0%	94.3%
3519566	10.32.1.230 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N	0.52	47.0	4.22e-01	100.0%	92.6%
3912537	10.3.1.1 ↗	beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF	0.52	45.0	4.07e-01	100.0%	99.3%
3390703	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.52	46.0	3.68e-01	100.0%	60.5%
3519406	5.1.4.6 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40	0.51	37.0	2.43e-01	77.1%	56.4%
3268480	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.51	44.0	3.82e-01	100.0%	68.1%
3633929	10.12.1.5 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C	0.51	38.0	3.61e-01	100.0%	65.8%
3663362	10.32.1.0 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like	0.51	44.0	3.80e-01	100.0%	73.1%
5042218	10.1.2.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED)	0.50	43.0	4.39e-01	99.0%	97.9%
3214876	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.50	44.0	4.36e-01	100.0%	99.0%

D5 medium residues 122-190

PDB

Domain cluster: representative

CATH (33)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wruA02	3.55.50.10	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains	0.84	74.0	6.80e-01	95.7%	78.4%
3gs9A02	3.55.50.40	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold ›	0.83	76.0	6.88e-01	100.0%	77.2%
3gr5A01	3.55.50.30	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold ›	0.82	71.0	6.60e-01	100.0%	77.6%
4g08A01	3.55.50.30	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold ›	0.80	67.0	6.72e-01	95.7%	91.4%
3d37A02	3.55.50.10	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains	0.78	67.0	6.25e-01	95.7%	80.0%
4m0nA02	3.55.50.30	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold ›	0.77	67.0	6.49e-01	98.6%	87.0%
3adyA00	3.55.50.60	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein	0.76	67.0	5.94e-01	100.0%	71.6%
2p5zX02	3.55.50.10	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains	0.74	65.0	5.86e-01	100.0%	80.4%
7pmpA01	3.55.50.30	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold ›	0.74	63.0	6.21e-01	95.7%	90.5%
4uhvA02	3.55.50.10	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains	0.70	61.0	5.59e-01	100.0%	78.3%
2otrA00	3.30.2310.20	Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like	0.62	44.0	4.09e-01	76.8%	92.2%
1e1hB01	1.20.58.540	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.61	40.0	3.54e-01	100.0%	44.7%
2kheA00	3.30.2310.20	Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like	0.61	45.0	4.17e-01	79.7%	98.9%
5idmA00	3.30.565.10	Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain	0.60	53.0	3.90e-01	97.1%	68.4%
1vx7X00	3.30.1360.210	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 ›	0.60	44.0	4.05e-01	81.2%	100.0%
4qpkB02	3.30.565.10	Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain	0.60	49.0	4.04e-01	94.2%	74.6%
5efrA02	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.58	41.0	4.09e-01	75.4%	100.0%
6j09A04	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.58	42.0	4.14e-01	78.3%	100.0%
1ejeA00	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.57	47.0	3.56e-01	98.6%	66.1%
1ze3D00	3.10.20.410	Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain	0.56	41.0	3.55e-01	79.7%	74.1%
3opyB01	3.10.180.10	Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1	0.56	33.0	2.70e-01	97.1%	28.1%
2qdfA03	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.55	42.0	4.09e-01	84.1%	97.4%
4k3bA03	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.55	40.0	3.69e-01	78.3%	94.6%
1mhxA00	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.55	40.0	4.10e-01	78.3%	87.7%
4l7aA00	3.40.390.70	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) ›	0.54	40.0	2.84e-01	84.1%	88.9%
1zxhA00	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.54	39.0	4.26e-01	78.3%	100.0%
3cz8A02	3.10.50.10	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.53	33.0	3.63e-01	92.8%	77.2%
2grvC03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.53	41.0	2.93e-01	87.0%	65.2%
1twfB05	3.90.1070.20	Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 ›	0.52	45.0	4.32e-01	100.0%	95.1%
1zpsA01	3.10.20.810	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase	0.52	38.0	3.50e-01	79.7%	82.1%
1hezE00	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.51	38.0	3.99e-01	79.7%	98.4%
1xocA03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.51	39.0	2.81e-01	85.5%	66.1%
1whrA00	3.30.1370.50	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain	0.50	37.0	3.09e-01	98.6%	44.4%

ECOD (55)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3948879	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.87	74.0	7.20e-01	95.7%	84.0%
3966286	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.86	75.0	7.33e-01	98.6%	86.7%
4008875	3070.1.1.4 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN	0.86	75.0	7.35e-01	98.6%	86.7%
4033374	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.85	75.0	6.97e-01	94.2%	81.2%
3981376	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.83	71.0	6.91e-01	97.1%	85.3%
3974036	3070.1.1.10 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0	0.83	71.0	6.89e-01	97.1%	85.3%
2588602	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.82	72.0	6.84e-01	98.6%	81.7%
3942645	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.82	73.0	6.45e-01	98.6%	74.0%
1389175	3070.1.1.10 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0	0.82	68.0	6.45e-01	95.7%	76.8%
4048982	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.81	70.0	6.68e-01	100.0%	82.5%
3974983	3070.1.1.10 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0	0.80	69.0	6.60e-01	98.6%	82.5%
4846239	3070.1.1.12 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd	0.80	70.0	6.58e-01	100.0%	79.8%
3974455	3070.1.1.7 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C	0.80	67.0	6.55e-01	92.8%	85.3%
3964700	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.80	71.0	6.78e-01	98.6%	100.0%
4957566	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.78	67.0	6.12e-01	100.0%	72.2%
4929757	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.78	70.0	6.00e-01	100.0%	70.0%
185652	3070.1.1.4 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN	0.78	70.0	5.66e-01	100.0%	53.9%
3982238	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.78	68.0	6.24e-01	100.0%	75.6%
4010199	3070.1.1.7 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C	0.78	65.0	6.35e-01	94.2%	85.3%
184487	3070.1.1.12 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd	0.78	67.0	6.25e-01	95.7%	80.0%
1108144	3070.1.1.7 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C	0.77	67.0	6.31e-01	98.6%	79.8%
3967020	3070.1.1.4 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN	0.77	69.0	6.44e-01	100.0%	81.2%
3974451	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.77	67.0	6.32e-01	98.6%	80.0%
3163777	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.77	67.0	6.41e-01	100.0%	83.7%
3503726	3070.1.1.8 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD	0.77	68.0	6.51e-01	100.0%	85.0%
4339226	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.76	64.0	5.99e-01	97.1%	76.5%
3972187	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.76	64.0	6.01e-01	95.7%	77.6%
3604611	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.76	65.0	6.02e-01	100.0%	74.4%
3972183	3070.1.1.4 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN	0.76	67.0	6.27e-01	100.0%	81.2%
3970829	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.75	67.0	6.13e-01	100.0%	80.0%
3968711	3070.1.1.2 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD	0.75	67.0	6.12e-01	100.0%	82.2%
3967349	3070.1.1.4 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN	0.75	66.0	6.22e-01	100.0%	87.1%
3972306	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.75	66.0	6.10e-01	100.0%	81.1%
3966573	3070.1.1.2 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD	0.75	66.0	6.07e-01	100.0%	81.1%
3943692	3070.1.1.2 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD	0.74	66.0	5.95e-01	100.0%	80.0%
3967438	3070.1.1.2 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD	0.74	65.0	6.01e-01	100.0%	80.0%
4241517	3070.1.1.6 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › TcpQ	0.73	63.0	6.09e-01	98.6%	91.3%
4194302	4212.1.1.1 ↗	beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N	0.62	46.0	3.87e-01	79.7%	69.2%
3979412	4212.1.1.1 ↗	beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N	0.59	44.0	3.93e-01	78.3%	85.3%
4968678	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.59	46.0	3.40e-01	95.7%	32.2%
5023339	310.3.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related	0.58	48.0	4.79e-01	95.7%	88.6%
4496885	1.1.5.10 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct	0.58	49.0	3.67e-01	98.6%	67.9%
3995944	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.58	51.0	3.01e-01	100.0%	61.3%
4993528	2004.1.1.5 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran	0.57	51.0	3.05e-01	100.0%	63.1%
4544763	4212.1.1.1 ↗	beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N	0.57	42.0	3.47e-01	79.7%	73.8%
4052318	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	40.0	3.23e-01	76.8%	70.0%
3637895	4961.1.1.1 ↗	a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4	0.55	47.0	4.33e-01	100.0%	87.4%
3968414	4212.1.1.1 ↗	beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N	0.54	40.0	3.46e-01	79.7%	81.8%
4014275	810.1.1.0 ↗	a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674)	0.54	44.0	3.45e-01	97.1%	61.2%
4011288	320.1.1.0 ↗	a+b two layers › R3H domain-like › R3H domain › R3H domain	0.54	38.0	4.09e-01	95.7%	86.7%
3410221	4961.1.1.1 ↗	a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4	0.53	46.0	4.26e-01	100.0%	88.9%
3185841	320.1.1.0 ↗	a+b two layers › R3H domain-like › R3H domain › R3H domain	0.53	40.0	4.00e-01	98.6%	80.0%
1205110	223.3.1.3 ↗	a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase	0.52	29.0	3.50e-01	78.3%	84.4%
4942023	4961.1.1.1 ↗	a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4	0.50	37.0	4.06e-01	82.6%	100.0%
3629521	320.1.1.1 ↗	a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H	0.50	37.0	3.31e-01	98.6%	53.4%

D6 medium residues 287-391

PDB

Domain cluster: rep: NC_071049.1__YP_010681510.1__PQE75_gp217__00130__D295-389

CATH (69)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1cxzB00	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.92	59.0	6.54e-01	80.0%	80.2%
4k0dA00	1.20.120.1730	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.90	65.0	5.71e-01	86.7%	53.8%
6h9xA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.90	67.0	6.82e-01	83.8%	78.4%
1qsdA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.90	68.0	6.97e-01	88.6%	80.4%
3fd9A03	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.90	61.0	7.26e-01	76.2%	100.0%
4abmD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.89	64.0	7.42e-01	73.3%	100.0%
3u0cA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.89	79.0	6.81e-01	96.2%	64.2%
3na7A00	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.88	80.0	5.86e-01	96.2%	41.4%
6r1nA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.88	69.0	7.02e-01	83.8%	82.5%
2fb5A01	1.10.287.770	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like	0.88	59.0	7.11e-01	71.4%	100.0%
3qo8A01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.87	67.0	6.77e-01	83.8%	79.2%
1fewA00	1.20.58.70	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.87	76.0	6.26e-01	92.4%	55.5%
3tulB00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.87	72.0	6.57e-01	86.7%	69.2%
3vkgA12	1.10.287.2610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.87	83.0	6.31e-01	100.0%	49.3%
2hz8A00	1.20.120.660	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain	0.87	50.0	4.86e-01	86.7%	53.0%
2dq0A01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.86	66.0	6.61e-01	83.8%	78.5%
6gy8A01	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.85	75.0	5.10e-01	92.4%	49.4%
4iloA00	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.85	76.0	5.66e-01	96.2%	41.5%
6h2dS01	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.85	76.0	5.78e-01	94.3%	62.3%
3layF00	1.20.120.1490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.85	54.0	6.27e-01	87.6%	87.2%
4mh6A00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.85	78.0	6.66e-01	97.1%	100.0%
3icxA01	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.85	59.0	6.86e-01	76.2%	100.0%
1wleA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.83	65.0	6.30e-01	88.6%	74.6%
5y06A01	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.83	79.0	5.93e-01	100.0%	48.9%
2gtsA00	1.10.287.850	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain	0.83	55.0	6.33e-01	87.6%	92.2%
1fxkB00	1.10.287.370	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.83	72.0	7.09e-01	90.5%	100.0%
1u5pA01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.83	56.0	5.59e-01	83.8%	67.6%
4i0xH00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.82	58.0	6.70e-01	76.2%	100.0%
1hciA03	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.82	61.0	5.79e-01	88.6%	66.7%
2rd0B00	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.82	72.0	6.46e-01	92.4%	75.5%
3ajwA00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.82	77.0	7.04e-01	100.0%	97.8%
1y1uA01	1.20.1050.20	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain	0.81	76.0	6.08e-01	100.0%	56.9%
3lssA01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.81	65.0	6.35e-01	83.8%	78.6%
4dylA02	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.81	65.0	6.85e-01	88.6%	95.7%
3g67A00	1.10.287.950	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein	0.81	62.0	4.85e-01	92.4%	39.9%
1sumB01	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.81	53.0	5.35e-01	87.6%	66.4%
2dw4A03	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.80	59.0	6.05e-01	76.2%	95.0%
4abxA02	6.10.140.1090	Special › Helix non-globular › Helix Hairpins ›	0.80	54.0	5.96e-01	77.1%	83.9%
1uruA01	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.80	74.0	5.77e-01	99.0%	59.8%
1l8dA00	1.10.287.510	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.80	64.0	6.46e-01	83.8%	100.0%
3syvA01	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.80	69.0	5.11e-01	91.4%	39.6%
3zdqA01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.80	74.0	5.08e-01	100.0%	33.3%
3fppA03	6.10.140.1990	Special › Helix non-globular › Helix Hairpins ›	0.79	63.0	6.74e-01	84.8%	100.0%
1fs0G02	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.79	62.0	6.71e-01	83.8%	95.5%
2y44A00	1.20.1260.80	Mainly Alpha › Up-down Bundle › Ferritin ›	0.79	64.0	5.23e-01	86.7%	48.9%
1rfyB00	1.10.287.160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat	0.78	53.0	5.74e-01	70.5%	81.8%
7metA01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.78	66.0	4.68e-01	93.3%	31.1%
5dn6J00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.77	52.0	6.12e-01	79.0%	98.6%
2ke4A00	6.10.140.470	Special › Helix non-globular › Helix Hairpins ›	0.77	62.0	6.41e-01	84.8%	89.8%
2v0xA01	1.10.287.3160	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.77	66.0	5.58e-01	92.4%	57.7%
2ch7A00	1.10.287.950	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein	0.76	66.0	4.62e-01	92.4%	36.6%
3r84A00	1.10.287.3490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.76	56.0	6.22e-01	90.5%	100.0%
1yf2A02	1.10.287.1120	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein	0.75	66.0	6.56e-01	91.4%	89.7%
1yg2A02	6.10.140.190	Special › Helix non-globular › Helix Hairpins ›	0.75	51.0	5.49e-01	82.9%	82.2%
2gl2B00	1.10.287.1700	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.75	60.0	5.98e-01	91.4%	83.5%
2qe7G01	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.73	59.0	6.17e-01	91.4%	93.8%
1j1jA02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.73	42.0	4.59e-01	77.1%	69.4%
4cqiA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.72	56.0	5.62e-01	83.8%	80.4%
3okqA00	1.20.58.1540	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain	0.72	64.0	6.01e-01	97.1%	83.2%
1avoB00	1.20.120.180	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain	0.72	57.0	5.19e-01	85.7%	62.9%
6bl6B01	1.20.1560.10	Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain	0.72	65.0	4.56e-01	98.1%	36.1%
3ofnY00	1.10.287.80	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain	0.72	64.0	6.25e-01	96.2%	95.7%
1i4dA00	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.70	62.0	5.10e-01	98.1%	55.9%
8ek4A01	1.20.120.20	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein	0.69	56.0	5.15e-01	85.7%	72.9%
1zoyD00	1.20.1300.10	Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit	0.63	37.0	3.80e-01	83.8%	59.8%
3ccyA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.62	38.0	3.41e-01	81.0%	43.5%
4ke2A00	6.10.140.1860	Special › Helix non-globular › Helix Hairpins ›	0.61	53.0	4.27e-01	93.3%	95.4%
1jadA00	1.20.1230.10	Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain	0.58	53.0	4.02e-01	99.0%	84.7%
7c1iA01	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.57	42.0	4.29e-01	76.2%	95.0%

ECOD (77)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3838987	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.94	74.0	5.75e-01	81.0%	47.5%
3240682	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.93	74.0	7.33e-01	81.9%	81.8%
3061928	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.93	77.0	6.13e-01	92.4%	47.6%
3481541	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.92	79.0	8.14e-01	93.3%	93.0%
3610088	5086.1.1.105 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Flagellar_rod	0.91	79.0	6.36e-01	89.5%	52.2%
3699468	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.90	86.0	6.63e-01	99.0%	51.5%
3592652	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.89	77.0	5.96e-01	89.5%	45.9%
4359654	605.2.1.3 ↗	alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N	0.89	71.0	6.98e-01	88.6%	78.2%
3699443	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.89	72.0	6.97e-01	83.8%	80.0%
3785314	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.89	79.0	5.77e-01	92.4%	65.3%
3409871	2003.1.2.18 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain	0.89	76.0	4.63e-01	88.6%	17.4%
4086306	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.88	82.0	6.14e-01	96.2%	45.8%
5073876	2004.1.1.198 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23	0.88	81.0	5.05e-01	96.2%	21.3%
3923871	192.2.1.48 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PF26022	0.88	85.0	6.98e-01	100.0%	74.1%
5066104	2004.1.1.87 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N	0.88	81.0	4.96e-01	100.0%	18.7%
3716214	3755.3.1.6 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Flagellar_rod	0.87	75.0	6.14e-01	89.5%	53.7%
5062807	1203.1.2.0 ↗	alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2	0.87	83.0	5.23e-01	100.0%	23.1%
4604091	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.87	72.0	7.40e-01	100.0%	90.0%
3600677	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.87	82.0	6.55e-01	100.0%	55.7%
4260979	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.87	79.0	5.67e-01	96.2%	37.7%
4977416	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.87	77.0	5.67e-01	92.4%	40.6%
3543713	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.86	69.0	7.44e-01	83.8%	97.8%
3565133	3755.3.1.44 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › JMY	0.86	68.0	6.44e-01	81.0%	72.5%
3634628	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.86	82.0	5.26e-01	99.0%	81.0%
4001186	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.86	82.0	6.46e-01	99.0%	54.2%
3642640	3755.4.1.0 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain	0.86	80.0	5.51e-01	97.1%	94.8%
5056871	3755.4.1.0 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain	0.86	82.0	5.61e-01	99.0%	34.2%
3560229	3291.1.1.230 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › TBCA_PH	0.86	81.0	7.19e-01	100.0%	73.6%
3650111	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.86	82.0	5.40e-01	100.0%	83.2%
4045531	192.7.1.2 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N	0.86	69.0	6.70e-01	87.6%	76.5%
3686252	3755.4.1.0 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain	0.86	75.0	5.92e-01	92.4%	48.5%
5062668	3755.1.1.0 ↗	alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related	0.86	80.0	7.41e-01	99.0%	80.8%
4001189	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.86	82.0	5.16e-01	100.0%	23.5%
3913291	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.85	79.0	5.18e-01	100.0%	26.8%
3495507	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.85	81.0	6.76e-01	99.0%	83.6%
4992667	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.85	78.0	5.53e-01	96.2%	36.4%
3972084	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.85	74.0	6.95e-01	91.4%	78.4%
3693465	192.7.1.2 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N	0.85	74.0	7.01e-01	100.0%	79.2%
4969098	3926.1.1.0 ↗	alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D	0.85	77.0	6.31e-01	96.2%	57.1%
4497098	3291.1.1.195 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › H-kinase_dim	0.84	67.0	6.42e-01	83.8%	99.2%
3493358	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.84	68.0	7.28e-01	87.6%	97.8%
3732397	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.84	72.0	6.85e-01	93.3%	79.2%
3930058	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.84	71.0	6.24e-01	89.5%	67.3%
5050733	192.8.1.0 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain	0.84	70.0	7.00e-01	97.1%	86.7%
3767239	4177.1.1.1 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH	0.83	73.0	5.10e-01	92.4%	32.9%
3623410	2004.1.1.198 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23	0.83	75.0	4.64e-01	96.2%	18.9%
4937604	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.82	69.0	6.67e-01	95.2%	80.0%
3704098	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.82	74.0	6.15e-01	96.2%	58.8%
3938607	2004.1.1.250 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd	0.82	75.0	4.47e-01	99.0%	15.5%
3562523	3755.4.1.0 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain	0.82	76.0	6.36e-01	99.0%	68.8%
3919840	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.82	76.0	5.85e-01	100.0%	54.1%
3236134	4323.1.1.1 ↗	alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I	0.80	76.0	6.25e-01	100.0%	66.9%
3559082	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.80	69.0	5.70e-01	92.4%	53.9%
3366371	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.80	71.0	5.13e-01	99.0%	36.7%
3829282	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.80	69.0	6.32e-01	100.0%	71.9%
1716505	1189.1.1.3 ↗	alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › GARP	0.79	64.0	5.23e-01	86.7%	48.9%
4203130	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.79	61.0	5.96e-01	81.9%	86.1%
3933048	4992.1.1.12 ↗	extended segments › RelB-like › RelB-like › RelB-like › LIN9_C	0.79	71.0	7.29e-01	95.2%	100.0%
5048802	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.78	69.0	5.69e-01	99.0%	55.0%
3694749	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.78	72.0	5.32e-01	100.0%	42.0%
3979729	3755.3.1.500 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › IpaC_SipC	0.78	70.0	6.67e-01	97.1%	91.7%
3715005	604.8.1.0 ↗	alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo	0.78	73.0	6.23e-01	100.0%	75.0%
4244210	192.8.1.0 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain	0.77	72.0	5.84e-01	99.0%	90.3%
3468090	5086.1.1.87 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING	0.77	67.0	6.49e-01	98.1%	86.1%
3485924	3291.1.1.152 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CDK5RAP3	0.76	73.0	5.49e-01	100.0%	48.9%
3871543	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.76	60.0	5.57e-01	92.4%	67.7%
3738267	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.76	70.0	6.12e-01	99.0%	68.7%
3990182	3922.1.1.226 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3	0.75	60.0	5.89e-01	92.4%	78.3%
3941012	2004.1.1.87 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N	0.75	69.0	4.59e-01	100.0%	40.8%
3784055	192.24.1.0 ↗	alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain	0.74	64.0	5.91e-01	91.4%	89.2%
5048496	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.74	65.0	5.20e-01	96.2%	88.8%
3169797	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.74	64.0	4.17e-01	95.2%	24.0%
3168493	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.73	60.0	5.09e-01	86.7%	86.1%
4038138	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.70	57.0	5.36e-01	88.6%	71.5%
3590184	3711.1.1.0 ↗	alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein	0.69	50.0	4.58e-01	79.0%	58.5%
4392833	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.68	60.0	4.68e-01	96.2%	46.0%
4996693	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.56	50.0	3.90e-01	96.2%	60.5%

D7 medium residues 665-728

PDB

Domain cluster: rep: MK448727.1__QBX16941.1__Javan291_0065__00065__D1-59

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24059.2 best	DUF7360	106.0	8.10e-31	60.9%	100.0%

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yu0A01	2.10.10.30	Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) ›	0.63	45.0	4.87e-01	87.5%	98.0%
1xo1A02	3.40.50.1010	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease	0.61	43.0	3.24e-01	75.0%	68.6%
1wxrA03	3.30.160.280	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.59	43.0	4.13e-01	78.1%	86.8%
3tc9A02	2.120.10.30	Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain	0.58	48.0	3.17e-01	100.0%	80.5%
3zdbA01	3.40.50.1010	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease	0.57	41.0	3.09e-01	75.0%	92.4%
4lg8A00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.56	44.0	2.91e-01	90.6%	37.4%
4j0wA00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.54	46.0	2.99e-01	100.0%	66.7%
3wx7A02	2.10.10.90	Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) ›	0.54	36.0	3.27e-01	70.3%	83.2%
3hutA02	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.54	39.0	3.06e-01	79.7%	87.3%
4gc1A01	2.90.10.10	Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain	0.53	43.0	3.78e-01	96.9%	57.7%
1f89A00	3.60.110.10	Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase	0.53	43.0	2.97e-01	98.4%	66.4%
3c7xA00	2.110.10.10	Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain	0.52	43.0	3.11e-01	93.8%	60.2%
7lgjA01	3.40.1190.10	Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain	0.52	45.0	3.14e-01	100.0%	95.7%
4msxA02	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.52	39.0	2.54e-01	87.5%	17.2%
2ph7A02	3.40.50.10670	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › af2093 domain	0.52	41.0	3.58e-01	85.9%	87.5%

ECOD (22)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3623217	3761.1.1.2 ↗	beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer	0.69	51.0	5.62e-01	78.1%	100.0%
4955619	2007.1.2.13 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6	0.69	53.0	3.89e-01	82.8%	98.8%
3989854	3761.1.1.4 ↗	beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › CFSR	0.66	53.0	4.80e-01	85.9%	94.1%
3291383	286.1.1.0 ↗	a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like	0.66	51.0	4.13e-01	84.4%	95.2%
5002640	3761.1.1.1 ↗	beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N	0.65	47.0	5.25e-01	79.7%	100.0%
3198822	2008.1.1.144 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27653	0.63	54.0	3.54e-01	96.9%	64.6%
3290031	4126.1.1.1 ↗	a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA	0.63	55.0	3.79e-01	100.0%	84.3%
1107990	3761.1.1.1 ↗	beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N	0.63	45.0	4.90e-01	87.5%	100.0%
4177188	3312.1.1.0 ↗	a+b two layers › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease	0.62	44.0	4.25e-01	76.6%	84.0%
3745227	2007.1.2.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor	0.59	51.0	3.77e-01	100.0%	65.6%
4999472	101.1.8.1 ↗	alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase	0.58	48.0	3.51e-01	95.3%	92.1%
3939735	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.56	47.0	2.95e-01	95.3%	53.0%
3927767	5.1.4.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40	0.54	42.0	2.67e-01	90.6%	32.1%
3717067	5.1.5.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed	0.54	44.0	2.86e-01	100.0%	57.6%
3419793	5.1.10.3 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295	0.54	40.0	3.18e-01	79.7%	63.7%
3252578	5.1.4.34 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88	0.53	43.0	2.57e-01	92.2%	59.8%
5062536	5.1.4.20 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Glu_cyclase_2	0.52	40.0	2.86e-01	89.1%	49.3%
3401459	270.1.1.2 ↗	beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C	0.51	37.0	3.10e-01	76.6%	51.8%
4011313	2006.1.1.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like	0.51	41.0	2.90e-01	90.6%	45.1%
4795566	219.1.1.3 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH	0.51	36.0	3.57e-01	95.3%	71.6%
4996608	2007.9.1.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2	0.50	38.0	2.80e-01	85.9%	78.5%
3719395	6110.1.1.1 ↗	alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2	0.50	38.0	2.37e-01	81.2%	34.1%