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NC_002519.1__NP_064761.1__SIO1p25__00024
Bact-VirNC_002519.1__NP_064761.1__SIO1p25__00024
Identity
- Accession:
- NC_002519 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Taxonomy
TaxID: 2905867
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 87-247
Domain cluster:
rep: OR032571.1__WJZ48267.1__X__00077__D150-291
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.70 | 26.0 | 3.51e-01 | 96.3% | 60.7% |
| 1am7A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 58.0 | 5.96e-01 | 98.1% | 94.8% |
| 1dc1A02 | 1.10.238.90 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Restriction endonuclease BsobI, helical domain | 0.66 | 26.0 | 3.54e-01 | 88.2% | 67.0% |
| 2vk9A03 | 1.10.3730.30 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.55 | 31.0 | 3.77e-01 | 93.2% | 87.8% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.51 | 47.0 | 4.57e-01 | 97.5% | 90.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4436102 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 27.0 | 4.51e-01 | 75.2% | 93.3% |
| 3806070 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.73 | 25.0 | 4.40e-01 | 92.5% | 100.0% |
| 3992442 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.72 | 31.0 | 4.18e-01 | 100.0% | 75.3% |
| 3220832 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.70 | 30.0 | 3.92e-01 | 100.0% | 70.0% |
| 3737690 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.66 | 31.0 | 3.77e-01 | 100.0% | 66.7% |
| 3234027 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.65 | 24.0 | 3.78e-01 | 90.1% | 86.7% |
| 3947950 | 235.1.1.33 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31186 | 0.64 | 59.0 | 5.98e-01 | 100.0% | 98.8% |
| 3220510 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.62 | 22.0 | 3.73e-01 | 94.4% | 100.0% |
| 5039859 | 6035.1.1.0 ↗ | alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain | 0.60 | 27.0 | 3.47e-01 | 72.7% | 73.3% |
| 4205221 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.59 | 52.0 | 5.23e-01 | 95.7% | 94.4% |
| 5044421 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.56 | 28.0 | 3.72e-01 | 100.0% | 92.5% |
| 5044676 | 109.61.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Uncharacterized protein PF2048.1 › Uncharacterized protein PF2048.1 | 0.56 | 23.0 | 3.42e-01 | 97.5% | 90.8% |
| 3281310 | 235.1.1.19 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT_2 | 0.54 | 49.0 | 4.47e-01 | 98.1% | 94.8% |