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NC_002661.2__NP_075487.1__phiSLTp24__00024

Bact-Vir

NC_002661.2__NP_075487.1__phiSLTp24__00024

Identity

Accession:
NC_002661 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-61
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06356.18 best DUF1064 65.8 6.50e-18 100.0% 48.7%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1usyC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 46.0 2.91e-01 98.1% 14.2%
6mvsA02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.55 45.0 3.06e-01 90.6% 65.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033074 2008.1.1.83 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF1064 0.83 75.0 5.56e-01 100.0% 41.1%
3595752 4001.1.1.4 a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB 0.62 40.0 3.03e-01 92.5% 26.9%
3473115 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.60 39.0 3.68e-01 84.9% 55.4%
3228279 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.56 44.0 2.47e-01 92.5% 62.7%