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NC_003313.1__NP_536630.1__K139p03__00003

Bact-Vir

NC_003313.1__NP_536630.1__K139p03__00003

Identity

Accession:
NC_003313 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-193
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ou3A01 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.64 50.0 5.29e-01 100.0% 91.6%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 39.0 3.60e-01 70.5% 80.4%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.55 38.0 4.36e-01 76.9% 96.1%
4c0eA02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 40.0 3.69e-01 75.1% 96.4%
3k3fA00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.53 40.0 3.24e-01 78.0% 72.0%
4ks9A01 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.52 35.0 4.04e-01 82.7% 94.4%
3ebbA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 40.0 3.48e-01 80.3% 94.7%
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.51 34.0 3.78e-01 86.7% 84.7%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 36.0 3.45e-01 74.6% 95.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3463994 148.1.3.365 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Tcp11 0.52 33.0 2.98e-01 86.1% 45.1%
D2 high residues 218-300
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00533.34 best BRCT 26.2 1.00e-05 98.8% 52.6%