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NC_003356.1__NP_543064.1__P27p12__00012

Bact-Vir

NC_003356.1__NP_543064.1__P27p12__00012

Identity

Accession:
NC_003356 ↗
Kingdom:
phage

Quality

88.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-51
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1au7A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 64.0 5.74e-01 100.0% 80.6%
1d5rA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 36.0 2.61e-01 75.5% 74.1%
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.50 35.0 3.54e-01 79.6% 88.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3680536 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.57 43.0 3.81e-01 87.8% 91.3%
3588178 5067.1.1.22 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › 7TMR-HDED 0.51 41.0 3.07e-01 100.0% 91.6%