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NC_003356.1__NP_543109.1__P27p57__00057

Bact-Vir

NC_003356.1__NP_543109.1__P27p57__00057

Identity

Accession:
NC_003356 ↗
Kingdom:
phage

Quality

95.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Enterobacteria_phage_phiP27

TaxID: 103807

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-53
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 50.0 3.16e-01 82.0% 17.3%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 49.0 4.63e-01 88.0% 64.5%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 52.0 5.14e-01 100.0% 85.2%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 51.0 4.39e-01 88.0% 92.8%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 54.0 4.62e-01 94.0% 81.7%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 51.0 4.66e-01 100.0% 65.7%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 45.0 2.86e-01 100.0% 14.1%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.64 43.0 3.76e-01 82.0% 45.5%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 52.0 3.74e-01 94.0% 50.7%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 54.0 4.76e-01 100.0% 93.6%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 51.0 3.85e-01 96.0% 57.8%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 51.0 4.21e-01 94.0% 81.2%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.63 48.0 4.32e-01 86.0% 73.2%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.62 50.0 4.77e-01 92.0% 91.5%
4l2iA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 46.0 3.10e-01 96.0% 20.0%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.62 54.0 3.22e-01 98.0% 98.8%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 48.0 4.61e-01 100.0% 77.0%
1bprA00 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.61 40.0 2.79e-01 70.0% 40.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 45.0 4.12e-01 88.0% 74.7%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 43.0 4.14e-01 96.0% 67.2%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 47.0 3.96e-01 92.0% 78.5%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.60 50.0 3.55e-01 100.0% 78.7%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 3.72e-01 100.0% 49.2%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.78e-01 100.0% 57.1%
6j5tB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 45.0 3.50e-01 90.0% 69.2%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 3.55e-01 94.0% 55.3%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.57 43.0 3.19e-01 86.0% 39.0%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 43.0 3.33e-01 92.0% 35.6%
7bi2A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 39.0 3.22e-01 76.0% 62.6%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.57 39.0 3.53e-01 72.0% 51.4%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 40.0 2.46e-01 84.0% 11.4%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 44.0 3.43e-01 100.0% 90.2%
2xf4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 44.0 3.06e-01 98.0% 92.9%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 41.0 3.87e-01 88.0% 67.6%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 44.0 3.51e-01 100.0% 63.5%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 46.0 3.55e-01 100.0% 56.3%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.55 45.0 2.84e-01 100.0% 86.1%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.55 37.0 3.80e-01 70.0% 95.6%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.14e-01 86.0% 71.8%
1kw3B02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 2.77e-01 76.0% 29.9%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.54 43.0 3.42e-01 96.0% 57.3%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.54 42.0 3.66e-01 86.0% 75.6%
1uyjA01 3.30.360.60 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.54 40.0 3.49e-01 84.0% 68.3%
3rc2A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 43.0 3.03e-01 100.0% 67.9%
6dnzA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.52 41.0 2.92e-01 92.0% 95.5%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 39.0 3.54e-01 86.0% 79.7%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.51 40.0 3.59e-01 92.0% 69.7%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.51 37.0 3.47e-01 80.0% 68.2%
1attA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 41.0 3.10e-01 94.0% 81.4%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.69e-01 100.0% 65.1%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 36.0 3.38e-01 82.0% 73.2%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.51 34.0 3.32e-01 70.0% 71.4%
1iqoA00 3.30.160.120 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hypothetical protein MTH1880 0.51 38.0 3.34e-01 88.0% 77.3%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3441142 4.8.1.7 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE 0.71 52.0 5.06e-01 92.0% 72.7%
3471995 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.70 55.0 4.59e-01 100.0% 48.4%
3388887 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.69 56.0 5.17e-01 100.0% 69.2%
3400005 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.69 54.0 5.18e-01 100.0% 73.3%
5018514 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 4.28e-01 98.0% 64.4%
3310899 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.68 56.0 4.77e-01 98.0% 55.3%
3935116 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.68 52.0 4.88e-01 100.0% 67.7%
1564338 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.68 50.0 3.16e-01 82.0% 17.3%
3856185 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.68 53.0 4.89e-01 100.0% 65.7%
4928794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 44.0 4.60e-01 72.0% 75.6%
3913999 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.68 53.0 4.31e-01 100.0% 43.8%
3350473 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.67 55.0 4.93e-01 92.0% 92.9%
5079413 5.1.3.272 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP 0.66 49.0 3.10e-01 82.0% 17.7%
3925471 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 52.0 4.99e-01 100.0% 76.7%
152070 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.66 52.0 4.66e-01 100.0% 61.3%
4379563 375.1.1.289 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 0.65 44.0 4.58e-01 70.0% 77.8%
4941125 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 53.0 4.10e-01 100.0% 40.9%
3173920 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.64 45.0 2.76e-01 100.0% 11.2%
4987228 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.64 49.0 3.41e-01 86.0% 54.4%
5046829 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 54.0 3.95e-01 100.0% 35.6%
4078426 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 54.0 4.17e-01 100.0% 66.7%
4025207 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 53.0 3.94e-01 100.0% 61.4%
3369818 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.63 50.0 4.67e-01 92.0% 83.1%
4673289 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 55.0 3.74e-01 100.0% 37.1%
3611177 1129.1.1.1 ↗ a+b three layers › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › Mitochondrial complex I, B17.2 subunit › NDUFA12 0.62 47.0 3.56e-01 82.0% 34.4%
4943922 2005.1.1.122 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF_alpha 0.62 44.0 3.01e-01 96.0% 19.0%
3347257 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 49.0 3.84e-01 94.0% 72.2%
3480321 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.60 47.0 4.24e-01 94.0% 79.2%
3927948 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 49.0 4.42e-01 100.0% 96.0%
4501723 4.8.1.45 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.59 44.0 4.34e-01 86.0% 87.3%
4970357 2003.1.3.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.59 49.0 2.79e-01 100.0% 10.6%
3536326 1073.1.1.0 ↗ alpha arrays › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) 0.59 45.0 3.89e-01 92.0% 81.1%
3225123 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 45.0 4.67e-01 98.0% 100.0%
3576957 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.59 47.0 3.53e-01 96.0% 54.3%
None — 0.58 50.0 3.16e-01 100.0% 68.9%
3505062 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.58 36.0 2.61e-01 100.0% 21.4%
3185246 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 3.72e-01 100.0% 68.5%
3660366 2003.1.2.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like 0.58 49.0 3.07e-01 100.0% 62.7%
933 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.58 48.0 3.78e-01 100.0% 57.1%
4460088 2.1.1.84 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N 0.58 48.0 3.86e-01 100.0% 56.4%
4003932 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.57 47.0 3.73e-01 100.0% 45.8%
3737890 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 44.0 2.85e-01 92.0% 27.2%
3585414 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.57 48.0 3.83e-01 100.0% 47.3%
1884919 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.57 45.0 3.84e-01 98.0% 80.0%
3663326 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.57 44.0 3.73e-01 100.0% 48.6%
4635248 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.57 49.0 2.92e-01 100.0% 80.5%
3273300 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.56 49.0 4.07e-01 100.0% 57.8%
4138663 4099.1.1.3 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.56 41.0 3.94e-01 88.0% 78.5%
3602836 284.1.3.6 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF749 0.56 45.0 3.80e-01 100.0% 89.0%
3277727 4.8.1.43 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.55 41.0 3.51e-01 100.0% 46.3%
4006488 4959.1.1.0 ↗ a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.55 39.0 3.75e-01 98.0% 63.1%
4968200 511.1.1.0 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.55 37.0 2.47e-01 72.0% 30.7%
5015408 4.8.1.50 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF749 0.55 45.0 3.88e-01 100.0% 98.9%
3989850 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 3.29e-01 80.0% 69.0%
4211951 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.55 43.0 3.80e-01 94.0% 81.2%
3514660 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 41.0 3.47e-01 86.0% 61.1%
4370161 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.54 37.0 2.67e-01 74.0% 43.1%
3966247 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.54 38.0 3.62e-01 96.0% 61.5%
3783916 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 41.0 4.03e-01 88.0% 92.7%
3263598 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.53 37.0 2.77e-01 76.0% 52.7%
3925738 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 43.0 3.34e-01 92.0% 49.1%
4558873 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.52 40.0 3.04e-01 96.0% 74.2%
3624239 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 35.0 3.04e-01 74.0% 54.4%
3930177 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.51 40.0 2.47e-01 88.0% 88.2%
None — 0.51 44.0 2.65e-01 100.0% 23.0%
3330227 3270.1.1.0 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase 0.50 43.0 3.59e-01 100.0% 55.6%
D2 high residues 66-184
PDB
Domain cluster: rep: SRR1747045_scaffold_1_prodigal-single.1__X__X__00027__D84-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14301.13 best DUF4376 67.3 2.20e-18 94.1% 89.6%