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NC_004303.1__NP_695133.1__O1205p55__00055

Bact-Vir

NC_004303.1__NP_695133.1__O1205p55__00055

Identity

Accession:
NC_004303 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Brussowvirus› Streptococcus_phage_01205

TaxID: 2681626

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-73
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.70 39.0 3.65e-01 71.6% 44.4%
1qqhA00 2.170.200.10 Mainly Beta › Beta Complex › Regulatory Protein E2; Chain: A; Domain 2 › Papillomavirus E2 early protein domain 0.67 47.0 3.64e-01 73.1% 77.1%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.63 42.0 3.29e-01 100.0% 32.2%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.57 40.0 3.79e-01 100.0% 61.3%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.55 35.0 3.27e-01 71.6% 52.4%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 49.0 3.14e-01 100.0% 97.5%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 46.0 2.97e-01 100.0% 29.3%
3e1tA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 43.0 2.92e-01 88.1% 37.3%
4r03A00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.53 41.0 3.55e-01 85.1% 86.2%
4z24A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 2.74e-01 91.0% 92.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.69e-01 94.0% 73.9%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.51 43.0 2.96e-01 98.5% 51.4%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 40.0 3.06e-01 89.6% 63.9%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995507 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.75 44.0 4.28e-01 74.6% 52.0%
2162624 3894.1.1.1 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.67 39.0 3.20e-01 76.1% 30.2%
2631766 3894.1.1.1 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.67 39.0 3.19e-01 76.1% 30.2%
3993946 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 35.0 4.31e-01 91.0% 85.0%
2464202 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.58 38.0 3.64e-01 100.0% 55.4%
4261822 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.57 36.0 2.61e-01 73.1% 23.2%
3506103 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.56 35.0 3.70e-01 77.6% 70.0%
3677800 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 41.0 3.21e-01 79.1% 81.8%
2011 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.55 49.0 3.14e-01 100.0% 97.5%
4226766 3894.1.1.3 ↗ beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M 0.55 36.0 2.96e-01 77.6% 35.4%
None — 0.54 45.0 2.77e-01 97.0% 63.5%
3944715 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.54 47.0 3.01e-01 100.0% 94.8%
3247159 63.1.1.8 ↗ beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH, PRKCSH_1 0.54 45.0 3.46e-01 98.5% 64.2%
1346676 3347.1.1.1 ↗ beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 0.53 41.0 3.55e-01 85.1% 86.2%
3819766 244.1.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.53 42.0 2.50e-01 86.6% 36.1%
3809272 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.53 46.0 3.05e-01 100.0% 90.1%
3940735 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 44.0 2.87e-01 100.0% 27.0%
5049418 2003.1.2.40 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.53 42.0 2.84e-01 88.1% 38.1%
3722480 2003.1.2.2 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N 0.52 42.0 2.70e-01 88.1% 42.5%
3299665 244.1.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.52 41.0 2.71e-01 85.1% 59.6%
4989217 304.39.1.6 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_2nd 0.52 32.0 3.33e-01 88.1% 66.7%
5053669 2003.1.2.300 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.52 41.0 2.52e-01 88.1% 42.4%
None — 0.52 41.0 2.55e-01 86.6% 25.5%
3706447 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 41.0 3.56e-01 95.5% 76.7%
3716878 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.51 41.0 2.64e-01 97.0% 27.9%
None — 0.51 42.0 2.65e-01 89.6% 59.4%
3946613 2003.1.2.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.51 41.0 2.99e-01 89.6% 74.1%