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NC_004305.1__NP_695154.1__phig1ep18__00018
Bact-VirNC_004305.1__NP_695154.1__phig1ep18__00018
Identity
- Accession:
- NC_004305 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-132
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 40.0 | 3.64e-01 | 72.3% | 50.3% |
| 2x6hA02 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.57 | 39.0 | 3.51e-01 | 70.5% | 87.3% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 44.0 | 3.97e-01 | 85.7% | 85.8% |
| 2p12A01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.55 | 36.0 | 3.19e-01 | 79.5% | 45.3% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 31.0 | 3.94e-01 | 76.8% | 98.5% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.52 | 41.0 | 3.74e-01 | 93.8% | 63.0% |
| 2xmoA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 40.0 | 2.96e-01 | 83.9% | 96.0% |
| 2w38A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 43.0 | 3.22e-01 | 95.5% | 84.1% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 36.0 | 4.02e-01 | 86.6% | 100.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4342741 | 243.19.1.3 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains › XkdV_N | 0.86 | 59.0 | 6.79e-01 | 76.8% | 92.9% |
| 3969556 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.61 | 43.0 | 3.67e-01 | 73.2% | 58.3% |
| 4969245 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 44.0 | 3.90e-01 | 75.0% | 84.5% |
| 4027047 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.55 | 43.0 | 4.01e-01 | 83.0% | 70.7% |
| 3671149 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 44.0 | 3.08e-01 | 87.5% | 77.9% |
| 3668463 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 42.0 | 3.29e-01 | 81.2% | 82.9% |
| 4105670 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.54 | 39.0 | 2.80e-01 | 75.0% | 32.5% |
| 3944596 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.54 | 38.0 | 3.80e-01 | 73.2% | 71.3% |
| 3232806 | 216.1.1.26 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › FmiP_Thoc5 | 0.52 | 47.0 | 4.30e-01 | 99.1% | 91.3% |
| 3929507 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 38.0 | 4.10e-01 | 76.8% | 90.5% |
| 3212468 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.50 | 36.0 | 3.78e-01 | 81.2% | 83.0% |
| 1724304 | 9.1.1.30 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_like | 0.50 | 36.0 | 3.79e-01 | 75.0% | 82.5% |
D2
high
residues 135-260
Domain cluster:
rep: MT880870.1__QPB07610.1__PLKLOBMN_00039__00039__D315-424
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.65 | 34.0 | 4.45e-01 | 75.4% | 95.4% |
| 8ezmH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 44.0 | 4.60e-01 | 97.6% | 83.0% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.59 | 48.0 | 3.97e-01 | 88.1% | 91.1% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.58 | 44.0 | 4.05e-01 | 81.7% | 92.3% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 34.0 | 3.89e-01 | 100.0% | 81.1% |
| 6rpxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.79e-01 | 96.8% | 81.2% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 45.0 | 4.13e-01 | 91.3% | 85.7% |
| 2c1iA01 | 3.30.565.50 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › | 0.53 | 31.0 | 3.33e-01 | 77.8% | 64.9% |
| 4ak1A01 | 2.60.40.2710 | Mainly Beta › Sandwich › Immunoglobulin-like › BT4661 domain 1 | 0.53 | 35.0 | 3.88e-01 | 100.0% | 88.4% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.64e-01 | 76.2% | 99.3% |
| 2bi0A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 38.0 | 3.61e-01 | 77.0% | 99.3% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.46e-01 | 75.4% | 98.8% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.51 | 37.0 | 3.65e-01 | 85.7% | 68.6% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.72e-01 | 98.4% | 84.2% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 41.0 | 3.82e-01 | 88.1% | 82.8% |
| 2gvhB02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 34.0 | 3.57e-01 | 73.8% | 74.4% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.51 | 35.0 | 3.50e-01 | 72.2% | 93.4% |
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 36.0 | 3.50e-01 | 76.2% | 100.0% |
| 2ifgA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 31.0 | 3.49e-01 | 100.0% | 84.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033340 | 3386.1.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related | 0.87 | 74.0 | 7.84e-01 | 99.2% | 98.2% |
| 3840079 | 4998.1.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 | 0.62 | 44.0 | 4.18e-01 | 73.0% | 86.7% |
| 3195470 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.60 | 51.0 | 4.18e-01 | 91.3% | 79.1% |
| 3743876 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.60 | 50.0 | 4.20e-01 | 91.3% | 82.7% |
| 3639154 | 331.4.1.27 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › VASt | 0.59 | 50.0 | 4.24e-01 | 91.3% | 74.6% |
| 3919105 | 6155.1.1.7 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › CLPTM1 | 0.58 | 47.0 | 4.06e-01 | 88.9% | 77.1% |
| 3180834 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.56 | 42.0 | 3.90e-01 | 79.4% | 81.2% |
| 4943895 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 31.0 | 2.62e-01 | 74.6% | 30.5% |
| 4524448 | 3156.1.1.18 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › CLPTM1 | 0.56 | 45.0 | 4.01e-01 | 86.5% | 74.3% |
| 4670973 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 34.0 | 3.81e-01 | 100.0% | 81.1% |
| 3275961 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.54 | 48.0 | 4.18e-01 | 98.4% | 92.5% |
| 4676601 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.54 | 40.0 | 3.64e-01 | 77.8% | 97.0% |
| 4283272 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.53 | 39.0 | 3.55e-01 | 76.2% | 94.7% |
| 6380 | 243.1.1.1 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B | 0.53 | 38.0 | 3.64e-01 | 76.2% | 99.3% |
| 3248609 | 11.32.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Calcium-dependent cell adhesion molecule-1 C-terminal domain › Calcium-dependent cell adhesion molecule-1 C-terminal domain › Membrane_bind | 0.53 | 39.0 | 4.06e-01 | 77.0% | 93.9% |
| 3808225 | 11.2.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 | 0.53 | 39.0 | 3.79e-01 | 77.8% | 99.3% |
| 4233092 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.52 | 37.0 | 3.30e-01 | 73.8% | 80.5% |
| 3795283 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 30.0 | 3.40e-01 | 74.6% | 74.0% |
| 3687430 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.51 | 36.0 | 3.56e-01 | 72.2% | 100.0% |
| 1065880 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.51 | 44.0 | 3.77e-01 | 98.4% | 99.1% |
| 3396540 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.51 | 43.0 | 3.54e-01 | 92.1% | 76.1% |