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NC_004305.1__YP_003084359.1__phig1ep54__00052

Bact-Vir

NC_004305.1__YP_003084359.1__phig1ep54__00052

Identity

Accession:
NC_004305 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-92
PDB
CATH (100)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 60.0 6.48e-01 80.0% 81.8%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 60.0 6.42e-01 80.0% 80.8%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 69.0 6.91e-01 100.0% 83.7%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 58.0 6.06e-01 80.0% 76.2%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 54.0 6.38e-01 81.1% 95.2%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 61.0 6.45e-01 78.9% 84.0%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 61.0 6.92e-01 78.9% 98.6%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 53.0 5.54e-01 80.0% 70.2%
3s2wG00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 56.0 4.88e-01 88.9% 47.4%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 58.0 4.97e-01 91.1% 48.5%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 55.0 6.52e-01 82.2% 98.4%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 52.0 5.14e-01 81.1% 62.4%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 6.32e-01 82.2% 85.2%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 56.0 6.49e-01 80.0% 97.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 60.0 6.23e-01 78.9% 82.1%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 6.33e-01 81.1% 95.5%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 52.0 6.21e-01 78.9% 98.3%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 4.71e-01 88.9% 45.7%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 59.0 4.93e-01 87.8% 46.6%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 58.0 4.94e-01 87.8% 47.9%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 6.03e-01 78.9% 82.5%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 56.0 6.02e-01 81.1% 85.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.43e-01 83.3% 63.5%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 5.01e-01 87.8% 50.0%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 4.82e-01 87.8% 44.4%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 62.0 6.21e-01 88.9% 81.1%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 5.03e-01 87.8% 51.5%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 5.09e-01 87.8% 52.3%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.82e-01 88.9% 45.1%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.03e-01 86.7% 53.2%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.95e-01 88.9% 48.6%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.51e-01 88.9% 67.7%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 6.21e-01 80.0% 87.3%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 59.0 4.86e-01 90.0% 46.7%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 51.0 6.06e-01 81.1% 98.4%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.98e-01 88.9% 50.7%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.80e-01 88.9% 45.7%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.72e-01 84.4% 80.0%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 5.72e-01 80.0% 81.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 6.14e-01 81.1% 98.4%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 6.10e-01 91.1% 83.7%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 55.0 6.19e-01 81.1% 94.3%
4chuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 5.02e-01 87.8% 54.0%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 4.83e-01 87.8% 49.3%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 6.14e-01 81.1% 98.4%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 5.01e-01 94.4% 51.1%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.62e-01 100.0% 98.7%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 5.00e-01 91.1% 50.7%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 56.0 6.23e-01 82.2% 97.2%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 5.64e-01 88.9% 70.6%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 5.50e-01 88.9% 72.0%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 5.29e-01 87.8% 59.3%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.73e-01 86.7% 71.4%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 5.71e-01 81.1% 85.3%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.33e-01 87.8% 63.4%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.61e-01 86.7% 72.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 4.93e-01 90.0% 51.8%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 4.76e-01 88.9% 48.6%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 4.98e-01 91.1% 52.6%
2htjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 50.0 5.87e-01 78.9% 100.0%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 55.0 5.93e-01 81.1% 87.2%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 57.0 6.12e-01 78.9% 91.0%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 50.0 5.75e-01 81.1% 95.2%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.92e-01 80.0% 97.0%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.91e-01 80.0% 97.1%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 6.21e-01 82.2% 96.0%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.45e-01 88.9% 69.9%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 6.18e-01 81.1% 97.3%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.82e-01 93.3% 80.9%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.58e-01 90.0% 74.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.43e-01 92.2% 65.0%
3broD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 4.94e-01 91.1% 54.5%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.62e-01 81.1% 91.4%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.78e-01 97.8% 85.9%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.73 55.0 5.98e-01 80.0% 100.0%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.09e-01 83.3% 70.2%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 49.0 5.56e-01 81.1% 94.0%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.90e-01 82.2% 95.8%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 48.0 5.03e-01 83.3% 75.3%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 6.02e-01 94.4% 93.9%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.95e-01 95.6% 88.5%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.77e-01 87.8% 52.5%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 6.06e-01 95.6% 91.8%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.96e-01 81.1% 62.6%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 5.80e-01 97.8% 87.6%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.92e-01 100.0% 92.0%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.95e-01 87.8% 59.8%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.01e-01 82.2% 68.9%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.63e-01 80.0% 59.8%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 5.30e-01 81.1% 94.0%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 5.29e-01 80.0% 98.5%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 4.94e-01 80.0% 84.7%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 5.33e-01 100.0% 73.9%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.67 45.0 4.52e-01 81.1% 66.7%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.07e-01 80.0% 79.8%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 5.08e-01 81.1% 93.2%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.58e-01 80.0% 65.7%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.50e-01 80.0% 72.5%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 54.0 5.39e-01 95.6% 96.8%
2ch0A01 1.10.10.1180 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAN1, winged-helix domain 0.63 50.0 4.91e-01 87.8% 91.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4568448 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.91 63.0 6.50e-01 78.9% 75.3%
4383741 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.91 65.0 6.68e-01 81.1% 77.6%
4311193 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.89 63.0 6.54e-01 81.1% 77.6%
5041641 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.88 65.0 7.11e-01 84.4% 92.0%
3979999 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.88 60.0 5.65e-01 75.6% 60.0%
4175915 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 62.0 6.44e-01 83.3% 78.8%
5028179 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.87 66.0 6.21e-01 87.8% 67.6%
4943729 101.1.2.878 alpha arrays › HTH › HTH › winged helix domain › CTP-dep_RFKase 0.86 65.0 6.39e-01 90.0% 74.7%
4449561 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.86 62.0 5.91e-01 83.3% 64.8%
5042832 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.85 62.0 6.26e-01 84.4% 75.6%
3946945 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.85 59.0 4.24e-01 81.1% 27.8%
5040967 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 63.0 6.32e-01 84.4% 76.7%
5011619 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.85 59.0 5.86e-01 83.3% 68.4%
5011613 101.1.2.225 alpha arrays › HTH › HTH › winged helix domain › F-93_WHD 0.84 60.0 5.91e-01 84.4% 69.5%
4648749 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.84 62.0 5.58e-01 78.9% 57.5%
5034713 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 63.0 6.05e-01 85.6% 70.0%
4565603 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 61.0 6.33e-01 83.3% 80.0%
4980266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 59.0 6.12e-01 81.1% 77.6%
3590570 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.83 69.0 6.10e-01 100.0% 63.2%
5038268 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 59.0 6.05e-01 81.1% 77.6%
3964741 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.83 69.0 6.64e-01 100.0% 79.0%
4546696 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 61.0 6.14e-01 83.3% 76.7%
5048256 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.83 55.0 5.74e-01 80.0% 72.9%
4250106 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.83 57.0 4.01e-01 81.1% 25.1%
4970238 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.82 56.0 5.25e-01 82.2% 59.0%
1298616 101.1.2.80 alpha arrays › HTH › HTH › winged helix domain › RepA_N 0.82 73.0 6.35e-01 95.6% 71.2%
3729904 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.82 65.0 6.66e-01 94.4% 87.1%
4991130 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 58.0 5.07e-01 82.2% 50.8%
4938001 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.82 63.0 6.17e-01 93.3% 75.8%
5048761 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 59.0 6.60e-01 83.3% 95.7%
4975425 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.82 62.0 6.22e-01 83.3% 78.9%
4931659 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 55.0 5.70e-01 81.1% 72.9%
3493224 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.82 64.0 6.29e-01 93.3% 77.9%
5034077 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.81 57.0 6.44e-01 82.2% 92.9%
5032275 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.81 62.0 6.02e-01 87.8% 72.0%
4369479 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.81 60.0 5.48e-01 83.3% 60.0%
4638765 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.81 59.0 5.03e-01 87.8% 48.9%
4984018 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 56.0 6.34e-01 81.1% 91.4%
5026732 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 64.0 6.32e-01 90.0% 78.9%
5031727 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.81 58.0 5.77e-01 81.1% 71.6%
4009064 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.80 55.0 5.87e-01 81.1% 80.0%
5023079 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.80 62.0 6.57e-01 88.9% 91.3%
5042730 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.80 57.0 5.92e-01 83.3% 78.8%
5050719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 56.0 6.44e-01 81.1% 100.0%
1087087 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.80 54.0 4.55e-01 82.2% 43.2%
5016743 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 58.0 6.26e-01 81.1% 90.7%
5080847 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.79 56.0 6.37e-01 81.1% 94.3%
4929958 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.79 56.0 5.07e-01 81.1% 55.5%
4962458 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.79 60.0 5.57e-01 88.9% 64.5%
5060703 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 55.0 6.32e-01 78.9% 98.5%
4945659 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 61.0 6.48e-01 93.3% 91.3%
3602557 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.79 57.0 5.76e-01 84.4% 75.6%
4960424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 55.0 6.27e-01 80.0% 100.0%
5035027 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 62.0 5.62e-01 92.2% 63.0%
3741612 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.78 66.0 6.63e-01 100.0% 88.9%
4939519 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.78 59.0 5.45e-01 86.7% 63.6%
5010592 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.78 56.0 5.00e-01 81.1% 55.0%
4144039 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 57.0 5.21e-01 81.1% 59.1%
3703137 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.78 56.0 6.27e-01 82.2% 95.7%
4996670 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 59.0 5.95e-01 81.1% 78.9%
4970012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 5.29e-01 81.1% 65.0%
4980177 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.78 52.0 4.65e-01 81.1% 50.8%
3958490 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 5.78e-01 81.1% 82.5%
3386305 101.1.2.242 alpha arrays › HTH › HTH › winged helix domain › RepL 0.78 58.0 6.41e-01 91.1% 100.0%
5079668 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 57.0 5.86e-01 93.3% 81.2%
4055578 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 60.0 5.07e-01 81.1% 57.1%
3278899 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 56.0 5.32e-01 88.9% 64.8%
3589189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 59.0 5.27e-01 81.1% 58.4%
None 0.76 60.0 6.09e-01 93.3% 84.4%
3283702 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.76 52.0 5.47e-01 81.1% 78.8%
4982081 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.76 61.0 5.61e-01 95.6% 67.0%
5010964 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.76 61.0 5.88e-01 91.1% 76.0%
134496 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.76 53.0 4.53e-01 87.8% 46.5%
None 0.75 60.0 6.00e-01 93.3% 84.4%
5067388 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 50.0 5.33e-01 81.1% 77.5%
None 0.75 60.0 5.93e-01 93.3% 81.1%
4938723 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 61.0 5.32e-01 98.9% 59.2%
5082809 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 60.0 5.71e-01 94.4% 73.3%
4972311 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.75 58.0 5.10e-01 85.6% 56.9%
5025451 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.75 59.0 5.47e-01 91.1% 68.2%
4979194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 57.0 5.67e-01 91.1% 76.8%
4993554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 4.38e-01 80.0% 45.7%
4965203 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.74 60.0 5.60e-01 95.6% 71.3%
3969402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 53.0 5.04e-01 82.2% 63.8%
4968065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 4.87e-01 95.6% 49.7%
4659180 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.73 50.0 5.67e-01 81.1% 91.4%
4940569 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 50.0 5.56e-01 75.6% 91.4%
4973783 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 56.0 5.54e-01 82.2% 77.9%
4344487 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.71 59.0 4.78e-01 96.7% 48.5%
3941861 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.71 50.0 5.40e-01 81.1% 89.3%
5080071 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 5.34e-01 82.2% 82.1%
3505980 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.70 50.0 5.34e-01 81.1% 89.3%
4645692 101.1.2.372 alpha arrays › HTH › HTH › winged helix domain › HTH_64 0.69 54.0 5.86e-01 87.8% 100.0%
4940432 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 5.27e-01 81.1% 81.1%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.67 57.0 4.61e-01 98.9% 49.4%
5071468 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 61.0 5.40e-01 98.9% 85.6%
5059033 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.66 58.0 5.59e-01 98.9% 92.4%
5036721 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 59.0 5.34e-01 100.0% 76.7%
4929213 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 58.0 5.27e-01 100.0% 82.5%
3636612 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.57 51.0 3.25e-01 100.0% 25.9%
D2 high residues 149-231
PDB
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.62 41.0 4.79e-01 91.6% 98.3%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.61 34.0 3.62e-01 74.7% 62.2%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.59 46.0 3.17e-01 84.3% 47.8%
1dcnA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.59 36.0 3.87e-01 84.3% 70.8%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.58 36.0 3.93e-01 80.7% 74.6%
4lq6A00 3.40.630.40 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases 0.56 41.0 3.11e-01 78.3% 82.6%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 47.0 4.48e-01 96.4% 83.0%
4bthA00 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.53 39.0 3.16e-01 77.1% 72.0%
5b00A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 37.0 2.68e-01 83.1% 24.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3872158 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 44.0 4.49e-01 97.6% 75.0%
4594380 148.1.3.49 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Hda_lid 0.63 49.0 4.96e-01 100.0% 87.5%
3704228 148.1.3.173 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 0.63 46.0 4.95e-01 98.8% 100.0%
4543015 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.61 37.0 3.85e-01 83.1% 63.7%
3386111 6130.1.1.0 alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain 0.61 40.0 4.33e-01 80.7% 80.0%
3987549 4953.1.1.4 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.60 37.0 3.69e-01 83.1% 60.0%
4274558 7549.1.1.1 a/b three-layered sandwiches › Indigoidine synthase A-like (Pfam 04227) › Indigoidine synthase A-like (Pfam 04227) › Indigoidine synthase A-like (Pfam 04227) › Indigoidine_A 0.60 46.0 3.17e-01 84.3% 48.4%
3688768 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.59 37.0 3.26e-01 100.0% 42.5%
4977535 3355.1.1.2 alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › CitMHS 0.59 50.0 3.18e-01 94.0% 72.7%
3990110 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.58 39.0 3.63e-01 100.0% 54.8%
3406437 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 40.0 3.73e-01 72.3% 77.0%
3970102 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.56 37.0 3.69e-01 77.1% 65.9%
4461234 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.55 38.0 3.27e-01 100.0% 44.4%
3304226 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.54 38.0 3.26e-01 100.0% 46.2%
3399139 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 36.0 2.58e-01 73.5% 82.6%
3593000 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.51 37.0 3.77e-01 79.5% 97.6%
3269970 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.51 42.0 3.94e-01 94.0% 81.0%
3654522 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.50 42.0 3.93e-01 96.4% 84.8%