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NC_004305.1__YP_003084360.1__phig1ep58__00056
Bact-VirNC_004305.1__YP_003084360.1__phig1ep58__00056
Identity
- Accession:
- NC_004305 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 79-160
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 41.0 | 3.16e-01 | 80.5% | 96.0% |
| 4euuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 3.72e-01 | 76.8% | 83.1% |
| 3ihjA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.32e-01 | 92.7% | 52.0% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 35.0 | 2.77e-01 | 74.4% | 35.1% |
| 4efoA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 39.0 | 3.88e-01 | 92.7% | 79.8% |
| 6vq6H01 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 36.0 | 2.71e-01 | 75.6% | 31.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3715315 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.60 | 44.0 | 3.16e-01 | 78.0% | 43.5% |
| 3482793 | 6070.1.1.0 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain | 0.57 | 30.0 | 3.62e-01 | 73.2% | 86.7% |
| 4981316 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 37.0 | 2.84e-01 | 75.6% | 31.5% |
| 4078439 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.52 | 39.0 | 4.33e-01 | 82.9% | 100.0% |
| 3961932 | 323.1.1.9 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › WS_DGAT_cat,WS_DGAT_C | 0.52 | 31.0 | 2.32e-01 | 95.1% | 20.4% |
| 3578918 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.52 | 36.0 | 3.16e-01 | 74.4% | 76.3% |
| 4975725 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.52 | 37.0 | 2.71e-01 | 75.6% | 29.3% |
| 3179489 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.51 | 38.0 | 3.27e-01 | 79.3% | 72.9% |
| 3680555 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.50 | 26.0 | 2.53e-01 | 80.5% | 41.1% |
D2
medium
residues 22-75
Domain cluster:
representative