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NC_004313.1__NP_700423.1__sb50__00050

Bact-Vir

NC_004313.1__NP_700423.1__sb50__00050

Identity

Accession:
NC_004313 ↗
Kingdom:
phage

Quality

70.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_ST64B

TaxID: 175950

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-94
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3q23A03 6.10.140.1360 Special › Helix non-globular › Helix Hairpins › 0.62 44.0 4.61e-01 86.1% 81.9%
1w36B04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.54 40.0 3.24e-01 77.2% 67.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3356738 2484.1.1.42 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_2 0.65 55.0 4.47e-01 92.4% 50.7%
4031068 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.64 57.0 5.62e-01 100.0% 90.6%
4026047 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.62 45.0 4.43e-01 86.1% 69.4%
3220759 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.61 45.0 3.92e-01 86.1% 51.7%
3722145 5054.1.1.58 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › YVC1_C 0.53 39.0 2.69e-01 91.1% 21.0%