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NC_004584.1__NP_795384.1__SpyM3_0692__00012

Bact-Vir

NC_004584.1__NP_795384.1__SpyM3_0692__00012

Identity

Accession:
NC_004584 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i5sA01 1.10.8.500 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase 0.61 47.0 4.34e-01 82.7% 66.2%
1u0mA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 49.0 3.34e-01 92.3% 47.0%
5ab0C04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.59 50.0 3.09e-01 96.2% 16.6%
7s0tF01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.59 48.0 3.08e-01 100.0% 25.2%
1gdhA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 44.0 3.25e-01 88.5% 87.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3782472 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.69 54.0 3.73e-01 84.6% 66.3%
3739712 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.64 49.0 3.66e-01 82.7% 79.2%
D2 medium residues 83-160
PDB