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NC_004584.1__NP_795384.1__SpyM3_0692__00012
Bact-VirNC_004584.1__NP_795384.1__SpyM3_0692__00012
Identity
- Accession:
- NC_004584 ↗
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Cluster
View cluster (85 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i5sA01 | 1.10.8.500 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase | 0.61 | 47.0 | 4.34e-01 | 82.7% | 66.2% |
| 1u0mA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.60 | 49.0 | 3.34e-01 | 92.3% | 47.0% |
| 5ab0C04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.59 | 50.0 | 3.09e-01 | 96.2% | 16.6% |
| 7s0tF01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.59 | 48.0 | 3.08e-01 | 100.0% | 25.2% |
| 1gdhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 3.25e-01 | 88.5% | 87.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3782472 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.69 | 54.0 | 3.73e-01 | 84.6% | 66.3% |
| 3739712 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.64 | 49.0 | 3.66e-01 | 82.7% | 79.2% |
D2
medium
residues 83-160
Domain cluster:
rep: MF580766.1__ATI19744.1__B0_033__00033__D2-75