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NC_004685.1__NP_817936.1__Corndogp085__00085
Bact-VirNC_004685.1__NP_817936.1__Corndogp085__00085
Identity
- Accession:
- NC_004685 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Taxonomy
TaxID: 2907833
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-72
Domain cluster:
representative
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 58.0 | 5.52e-01 | 72.0% | 67.2% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 73.0 | 6.65e-01 | 100.0% | 78.8% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 66.0 | 6.37e-01 | 100.0% | 78.6% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 64.0 | 6.56e-01 | 98.0% | 89.6% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.81 | 72.0 | 5.59e-01 | 100.0% | 51.9% |
| 2e19A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 65.0 | 6.67e-01 | 98.0% | 95.7% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 69.0 | 6.25e-01 | 100.0% | 72.1% |
| 6l25A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.79 | 68.0 | 4.21e-01 | 94.0% | 23.5% |
| 1j6oA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.79 | 68.0 | 4.20e-01 | 94.0% | 23.1% |
| 1o4xA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.79 | 68.0 | 6.64e-01 | 100.0% | 88.9% |
| 2y1hB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.78 | 67.0 | 4.13e-01 | 94.0% | 21.9% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 69.0 | 5.03e-01 | 100.0% | 43.6% |
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 69.0 | 6.28e-01 | 100.0% | 80.3% |
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.77 | 66.0 | 5.66e-01 | 98.0% | 61.0% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 66.0 | 5.77e-01 | 100.0% | 64.5% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.76 | 55.0 | 4.46e-01 | 78.0% | 45.8% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 65.0 | 5.94e-01 | 100.0% | 72.1% |
| 3gg7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.76 | 66.0 | 4.12e-01 | 96.0% | 23.5% |
| 2ld5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 65.0 | 5.99e-01 | 100.0% | 74.6% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 65.0 | 5.75e-01 | 100.0% | 67.6% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 62.0 | 6.39e-01 | 98.0% | 100.0% |
| 1xwyA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.75 | 65.0 | 4.08e-01 | 98.0% | 25.4% |
| 2jn6A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 59.0 | 5.05e-01 | 98.0% | 52.9% |
| 7a0hA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.75 | 63.0 | 5.01e-01 | 94.0% | 48.5% |
| 1ks9A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.74 | 63.0 | 4.83e-01 | 100.0% | 56.1% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.73 | 63.0 | 4.95e-01 | 100.0% | 47.3% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 57.0 | 5.29e-01 | 98.0% | 68.3% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 50.0 | 4.45e-01 | 72.0% | 57.7% |
| 1e3oC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 56.0 | 5.71e-01 | 90.0% | 91.7% |
| 3egoA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.73 | 61.0 | 4.73e-01 | 100.0% | 55.4% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 58.0 | 5.34e-01 | 96.0% | 68.8% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 59.0 | 5.52e-01 | 100.0% | 73.0% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 60.0 | 5.53e-01 | 100.0% | 76.5% |
| 4a18Q01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.71 | 60.0 | 5.46e-01 | 98.0% | 75.4% |
| 2kxpA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.71 | 62.0 | 4.88e-01 | 100.0% | 65.4% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 61.0 | 5.72e-01 | 98.0% | 80.3% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.70 | 54.0 | 5.32e-01 | 90.0% | 100.0% |
| 1wh5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 57.0 | 5.11e-01 | 100.0% | 68.8% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 5.59e-01 | 100.0% | 73.8% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.70 | 59.0 | 4.65e-01 | 96.0% | 69.8% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 5.26e-01 | 100.0% | 73.0% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 5.15e-01 | 100.0% | 66.2% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.69 | 62.0 | 5.31e-01 | 100.0% | 77.2% |
| 2kt0A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 58.0 | 5.93e-01 | 96.0% | 100.0% |
| 1sxjC03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.68 | 56.0 | 4.72e-01 | 100.0% | 52.6% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.68 | 59.0 | 4.41e-01 | 100.0% | 55.0% |
| 1kblA04 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.67 | 60.0 | 3.55e-01 | 96.0% | 25.4% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 53.0 | 4.25e-01 | 98.0% | 43.3% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 47.0 | 3.41e-01 | 80.0% | 81.1% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.86e-01 | 98.0% | 73.1% |
| 7wf8B01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.63 | 51.0 | 3.95e-01 | 94.0% | 56.2% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.63 | 52.0 | 4.59e-01 | 100.0% | 61.8% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 45.0 | 3.32e-01 | 80.0% | 85.9% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.38e-01 | 100.0% | 53.9% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 53.0 | 4.87e-01 | 100.0% | 76.1% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.53e-01 | 96.0% | 66.7% |
| 4e21B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 51.0 | 3.82e-01 | 100.0% | 76.6% |
| 2d9jA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.59 | 47.0 | 4.20e-01 | 96.0% | 93.7% |
| 6xzqA01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.58 | 47.0 | 3.39e-01 | 94.0% | 48.8% |
| 4gczA03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.57 | 40.0 | 3.74e-01 | 76.0% | 63.1% |
| 1oxjA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.57 | 42.0 | 4.02e-01 | 100.0% | 68.9% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 42.0 | 3.70e-01 | 84.0% | 61.6% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.54 | 43.0 | 3.96e-01 | 100.0% | 67.2% |
| 3zx4A02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.53 | 45.0 | 3.80e-01 | 98.0% | 94.3% |
| 3k8kA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 43.0 | 2.67e-01 | 100.0% | 25.1% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 42.0 | 3.20e-01 | 100.0% | 50.7% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4288489 | 4973.1.1.2 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaG_cat_HB | 0.85 | 76.0 | 6.60e-01 | 100.0% | 66.7% |
| 3257506 | 101.1.1.333 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ATG29_N | 0.84 | 73.0 | 6.37e-01 | 100.0% | 65.3% |
| 3177199 | 3541.1.1.2 ↗ | beta sandwiches › Atg29-Atg31 › Atg29-Atg31 › Atg29-Atg31 › ATG29_N | 0.84 | 75.0 | 6.00e-01 | 100.0% | 52.6% |
| 3519655 | 101.1.10.33 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C | 0.83 | 74.0 | 5.15e-01 | 100.0% | 65.8% |
| 4248203 | 101.1.10.33 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C | 0.83 | 75.0 | 4.90e-01 | 100.0% | 72.8% |
| 3575981 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.81 | 74.0 | 6.25e-01 | 100.0% | 97.5% |
| 3500206 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 72.0 | 6.27e-01 | 100.0% | 66.7% |
| 4046675 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.80 | 71.0 | 5.98e-01 | 100.0% | 62.4% |
| 3536325 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 73.0 | 7.08e-01 | 100.0% | 96.4% |
| 3886164 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.80 | 65.0 | 6.60e-01 | 100.0% | 90.0% |
| 4319187 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.80 | 69.0 | 5.76e-01 | 100.0% | 56.5% |
| 4093017 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.80 | 71.0 | 6.21e-01 | 100.0% | 70.7% |
| 3272819 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.80 | 70.0 | 5.43e-01 | 100.0% | 50.0% |
| 4404513 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 69.0 | 6.03e-01 | 100.0% | 65.3% |
| 3888041 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 69.0 | 6.27e-01 | 100.0% | 73.8% |
| 3963650 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 68.0 | 6.81e-01 | 98.0% | 98.0% |
| 3854655 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 68.0 | 6.89e-01 | 100.0% | 98.0% |
| 3495504 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 68.0 | 6.88e-01 | 100.0% | 98.0% |
| 3538312 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.79 | 69.0 | 6.93e-01 | 100.0% | 98.0% |
| 4945647 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 67.0 | 5.42e-01 | 100.0% | 54.0% |
| 3507787 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 69.0 | 6.95e-01 | 100.0% | 98.0% |
| 3478184 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 68.0 | 5.39e-01 | 100.0% | 49.0% |
| 4507511 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.78 | 63.0 | 4.25e-01 | 92.0% | 24.2% |
| 3889817 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 68.0 | 5.79e-01 | 100.0% | 61.3% |
| 3796365 | 101.1.1.421 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain, CUT | 0.78 | 68.0 | 4.51e-01 | 100.0% | 25.1% |
| 4944587 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 66.0 | 5.28e-01 | 100.0% | 52.4% |
| 160866 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.78 | 69.0 | 5.89e-01 | 100.0% | 67.5% |
| 3217489 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.77 | 65.0 | 6.53e-01 | 96.0% | 94.0% |
| 3215989 | 101.1.1.289 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB | 0.77 | 67.0 | 5.73e-01 | 100.0% | 61.3% |
| 3730715 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 67.0 | 6.55e-01 | 98.0% | 89.1% |
| 3318879 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 63.0 | 5.87e-01 | 96.0% | 78.5% |
| 4261007 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.76 | 63.0 | 5.81e-01 | 94.0% | 73.8% |
| 3590898 | 101.1.20.1 ↗ | alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD | 0.76 | 61.0 | 4.33e-01 | 100.0% | 29.3% |
| 3778380 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 66.0 | 5.97e-01 | 100.0% | 75.7% |
| 5076657 | 2002.1.1.44 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase | 0.76 | 67.0 | 4.20e-01 | 98.0% | 23.7% |
| 4201679 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 67.0 | 5.60e-01 | 100.0% | 60.0% |
| 2056101 | 4973.1.1.1 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind | 0.75 | 59.0 | 5.50e-01 | 92.0% | 67.7% |
| 160865 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.75 | 63.0 | 5.47e-01 | 100.0% | 60.0% |
| 4944635 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 5.46e-01 | 100.0% | 57.6% |
| 3229130 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.75 | 66.0 | 6.61e-01 | 98.0% | 98.0% |
| 3318298 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 63.0 | 5.87e-01 | 100.0% | 83.1% |
| 3507783 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 61.0 | 5.82e-01 | 96.0% | 80.0% |
| 3642026 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 61.0 | 6.02e-01 | 100.0% | 96.4% |
| 3300593 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 61.0 | 5.98e-01 | 100.0% | 98.2% |
| 3452003 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.73 | 62.0 | 4.13e-01 | 98.0% | 24.4% |
| 3269226 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.72 | 62.0 | 5.48e-01 | 100.0% | 77.3% |
| 3744196 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 59.0 | 5.91e-01 | 100.0% | 90.0% |
| 3665479 | 109.29.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Chloroplast inner membrane protein TIC110 › Chloroplast inner membrane protein TIC110 › Tic110 | 0.72 | 63.0 | 3.57e-01 | 100.0% | 10.3% |
| 4992012 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 61.0 | 5.80e-01 | 98.0% | 93.3% |
| 3970054 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 61.0 | 6.14e-01 | 100.0% | 100.0% |
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.71 | 40.0 | 3.21e-01 | 76.0% | 31.1% |
| 4972388 | 101.1.2.949 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28863 | 0.70 | 59.0 | 4.04e-01 | 100.0% | 25.8% |
| 5083541 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 5.51e-01 | 98.0% | 75.4% |
| 3507798 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.70 | 61.0 | 5.54e-01 | 96.0% | 78.5% |
| 5076076 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.69 | 58.0 | 4.47e-01 | 98.0% | 40.8% |
| 3896790 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 4.99e-01 | 100.0% | 65.3% |
| 2832148 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.68 | 56.0 | 4.67e-01 | 100.0% | 51.5% |
| 4930909 | 101.29.1.0 ↗ | alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like | 0.68 | 59.0 | 5.75e-01 | 98.0% | 90.9% |
| 3241028 | 101.1.2.649 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF28730 | 0.67 | 58.0 | 4.92e-01 | 100.0% | 70.6% |
| 4955389 | 101.1.1.542 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF790 | 0.67 | 58.0 | 5.67e-01 | 98.0% | 96.4% |
| 147067 | 3276.1.1.1 ↗ | alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › MogR_DNAbind | 0.67 | 56.0 | 5.25e-01 | 100.0% | 78.1% |
| 3715754 | 2485.1.1.50 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_13 | 0.66 | 52.0 | 3.46e-01 | 90.0% | 93.5% |
| 4346994 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.65 | 54.0 | 4.78e-01 | 100.0% | 91.3% |
| 5025290 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.65 | 55.0 | 4.05e-01 | 98.0% | 36.9% |
| 5000330 | 101.1.2.109 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rio2_N | 0.64 | 53.0 | 4.63e-01 | 100.0% | 60.0% |
| 5053497 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 53.0 | 5.09e-01 | 98.0% | 85.0% |
| 3858623 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.64 | 50.0 | 3.59e-01 | 94.0% | 32.4% |
| 5021741 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.63 | 52.0 | 4.80e-01 | 100.0% | 75.7% |
| 3708001 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.63 | 51.0 | 4.74e-01 | 100.0% | 100.0% |
| 4106041 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.62 | 48.0 | 5.00e-01 | 94.0% | 100.0% |
| 3543629 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.61 | 48.0 | 3.31e-01 | 90.0% | 68.6% |
| 4073017 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.61 | 47.0 | 4.65e-01 | 94.0% | 90.9% |
| 3286628 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.61 | 53.0 | 4.71e-01 | 100.0% | 66.7% |
| 3892460 | 548.1.1.1 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP | 0.59 | 41.0 | 3.95e-01 | 74.0% | 66.7% |
| 4970556 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.55 | 43.0 | 3.77e-01 | 88.0% | 86.3% |
| 3998538 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.50 | 43.0 | 3.92e-01 | 100.0% | 80.0% |