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NC_004688.1__NP_818334.1__Omega_gp33__00033
Bact-VirNC_004688.1__NP_818334.1__Omega_gp33__00033
Identity
- Accession:
- NC_004688 ↗
- Kingdom:
- phage
Quality
93.1
mean pLDDT
Taxonomy
TaxID: 2907835
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-77
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2odfB01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.57 | 48.0 | 3.35e-01 | 93.2% | 45.6% |
| 4nlcA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 39.0 | 2.78e-01 | 77.0% | 41.2% |
| 3otgA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 42.0 | 3.09e-01 | 90.5% | 67.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014698 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.67 | 46.0 | 2.89e-01 | 91.9% | 13.6% |
| 3215505 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.59 | 48.0 | 3.61e-01 | 94.6% | 36.2% |
| 4033796 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.53 | 48.0 | 2.95e-01 | 98.6% | 80.7% |
| 4448094 | 367.1.1.1 ↗ | few secondary structure elements › Insulin-like › Insulin-like › Insulin-like › Insulin | 0.52 | 32.0 | 3.31e-01 | 70.3% | 66.2% |
| 3730095 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.51 | 36.0 | 3.38e-01 | 75.7% | 66.3% |