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NC_004688.1__NP_818444.1__Omega_gp144__00143

Bact-Vir

NC_004688.1__NP_818444.1__Omega_gp144__00143

Identity

Accession:
NC_004688 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Omegavirus› Mycobacterium_phage_Omega

TaxID: 2907835

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-195
PDB
Domain cluster: rep: OQ067477.1__WCD44189.1__Lumi_050__00050__D65-227
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6ro0D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 34.0 4.22e-01 83.4% 96.4%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 29.0 3.93e-01 83.4% 100.0%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 30.0 3.64e-01 86.2% 87.7%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4278743 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.67 32.0 4.13e-01 78.5% 77.3%
4298544 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 32.0 3.88e-01 79.6% 71.2%
5076766 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.58 29.0 4.01e-01 98.9% 96.7%
4045978 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.57 23.0 3.70e-01 74.0% 100.0%
164228 2.1.1.54 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3217 0.54 29.0 3.77e-01 84.5% 90.4%
3211783 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 24.0 3.33e-01 76.8% 84.7%
4138994 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.53 23.0 3.46e-01 73.5% 100.0%
5026958 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.51 28.0 3.27e-01 71.3% 72.3%
5030532 1.1.1.8 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas 0.51 22.0 2.69e-01 80.1% 59.1%
4988038 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 34.0 4.06e-01 83.4% 100.0%
3964752 868.1.1.1 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.50 37.0 3.99e-01 77.3% 98.7%
5009916 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.50 23.0 3.06e-01 72.9% 77.1%