NC_004735.1__NP_835616.1Rm378p02900029

Bact-Vir

NC_004735.1__NP_835616.1__Rm378p029__00029

Identity

92.2 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodothermus_phage_RM378

TaxID: 148943

View cluster (40 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 120-195

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ctjA00	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.54	32.0	2.99e-01	100.0%	46.3%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4028366	212.1.1.0 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like	0.60	47.0	4.75e-01	100.0%	86.5%
4975324	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.51	43.0	3.55e-01	100.0%	77.4%
3684423	327.11.2.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I)	0.50	34.0	3.19e-01	72.4%	81.0%

D2 medium residues 2-106_201-221

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fgxA00	3.30.2220.10	Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171	0.71	45.0	5.09e-01	82.5%	84.4%
1jhfA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	29.0	3.55e-01	84.1%	91.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
185252	3547.1.1.1 ↗	a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › DUF6848	0.71	45.0	5.09e-01	82.5%	84.4%