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NC_004735.1__NP_835620.1__Rm378p033__00033

Bact-Vir

NC_004735.1__NP_835620.1__Rm378p033__00033

Identity

Accession:
NC_004735 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodothermus_phage_RM378

TaxID: 148943

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-50
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jvwA01 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.64 45.0 4.31e-01 76.0% 75.0%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 3.31e-01 80.0% 79.8%
4i8oA03 1.10.8.1130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain 0.54 41.0 3.72e-01 82.0% 61.2%
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 35.0 3.16e-01 70.0% 44.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707261 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 39.0 3.04e-01 84.0% 71.5%
4933412 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.53 40.0 3.01e-01 86.0% 80.0%