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NC_004735.1__NP_835646.1__Rm378p059__00059

Bact-Vir

NC_004735.1__NP_835646.1__Rm378p059__00059

Identity

Accession:
NC_004735 ↗
Kingdom:
phage

Quality

63.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodothermus_phage_RM378

TaxID: 148943

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-95_281-313
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.83e-01 88.6% 67.1%
2yq2A01 2.60.320.20 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › Pestivirus envelope glycoprotein E2, domain A 0.51 34.0 3.92e-01 90.2% 95.5%
1i0rA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.82e-01 88.6% 66.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971552 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 32.0 3.99e-01 99.2% 94.3%
D2 high residues 104-277
PDB
D3 high residues 320-467
PDB