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NC_004735.1__NP_835649.1__Rm378p062__00062
Bact-VirNC_004735.1__NP_835649.1__Rm378p062__00062
Identity
- Accession:
- NC_004735 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
View cluster (65 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-124
Domain cluster:
rep: IMGVR_UViG_3300016457_001358-3300016457-Ga0186713_116300108__D6-117
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.74 | 60.0 | 4.99e-01 | 86.1% | 54.9% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.73 | 60.0 | 5.07e-01 | 86.1% | 58.2% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.71 | 48.0 | 5.36e-01 | 95.9% | 88.3% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.68 | 58.0 | 4.27e-01 | 92.6% | 76.7% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.68 | 61.0 | 4.91e-01 | 97.5% | 90.4% |
| 1evlA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 46.0 | 4.76e-01 | 95.9% | 75.0% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 47.0 | 5.13e-01 | 85.2% | 90.6% |
| 3n2qA02 | 3.30.300.190 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.66 | 46.0 | 4.69e-01 | 71.3% | 100.0% |
| 4qbnA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.65 | 47.0 | 5.29e-01 | 95.1% | 100.0% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 46.0 | 4.90e-01 | 99.2% | 86.5% |
| 1v95A01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 46.0 | 4.71e-01 | 98.4% | 79.3% |
| 4lb0A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.63 | 49.0 | 4.43e-01 | 82.0% | 69.5% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 45.0 | 4.68e-01 | 98.4% | 81.8% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 47.0 | 5.08e-01 | 79.5% | 100.0% |
| 3ndhA00 | 3.40.600.30 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › | 0.62 | 53.0 | 4.38e-01 | 91.8% | 72.4% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 56.0 | 5.50e-01 | 100.0% | 96.2% |
| 6j7cA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 43.0 | 3.94e-01 | 73.0% | 84.3% |
| 5ghrA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.60 | 43.0 | 4.33e-01 | 74.6% | 90.4% |
| 2azpA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 45.0 | 4.17e-01 | 79.5% | 68.8% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.60 | 50.0 | 3.88e-01 | 90.2% | 81.0% |
| 3nvaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 4.01e-01 | 97.5% | 88.9% |
| 3g7uA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 52.0 | 4.54e-01 | 95.1% | 96.2% |
| 5ha4A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.59 | 44.0 | 4.27e-01 | 80.3% | 70.6% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.58 | 43.0 | 3.93e-01 | 77.9% | 98.2% |
| 6upsA01 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.58 | 50.0 | 4.59e-01 | 92.6% | 86.5% |
| 1s7jA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.57 | 43.0 | 4.25e-01 | 79.5% | 96.2% |
| 3uh0A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 45.0 | 4.51e-01 | 98.4% | 82.3% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 48.0 | 3.90e-01 | 90.2% | 88.6% |
| 1eyuA00 | 3.40.210.10 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › PVUII Endonuclease, subunit A | 0.57 | 49.0 | 4.52e-01 | 93.4% | 82.1% |
| 1dgmA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 48.0 | 3.77e-01 | 95.1% | 88.8% |
| 3ejxA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 43.0 | 4.05e-01 | 81.1% | 98.6% |
| 3w4sA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 48.0 | 3.74e-01 | 95.9% | 82.8% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.53 | 46.0 | 3.18e-01 | 95.1% | 76.0% |
| 1w94A00 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.53 | 43.0 | 3.93e-01 | 95.1% | 66.5% |
| 2lqoA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 32.0 | 3.62e-01 | 97.5% | 80.7% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.53 | 46.0 | 3.81e-01 | 95.1% | 84.3% |
| 2wtzA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.53 | 45.0 | 3.68e-01 | 94.3% | 88.0% |
| 2oivA00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.53 | 46.0 | 4.14e-01 | 95.9% | 85.3% |
| 1peaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 43.0 | 3.83e-01 | 88.5% | 89.8% |
| 4ls9B02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 45.0 | 4.51e-01 | 94.3% | 91.9% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.52 | 46.0 | 4.71e-01 | 98.4% | 100.0% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.52 | 46.0 | 4.47e-01 | 98.4% | 99.3% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 29.0 | 3.49e-01 | 73.8% | 88.9% |
| 4v1ap00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 32.0 | 3.54e-01 | 99.2% | 78.4% |
| 3iplB01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 43.0 | 3.11e-01 | 92.6% | 61.8% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.51 | 33.0 | 3.76e-01 | 99.2% | 89.8% |
| 5z1gB01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.51 | 45.0 | 3.78e-01 | 95.9% | 59.8% |
| 3icaB00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 40.0 | 3.43e-01 | 86.9% | 99.5% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 44.0 | 3.97e-01 | 95.9% | 81.5% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614372 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.76 | 67.0 | 5.15e-01 | 94.3% | 75.4% |
| 3279385 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 60.0 | 5.35e-01 | 88.5% | 84.0% |
| 4285702 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 47.0 | 5.01e-01 | 95.1% | 78.1% |
| 4928680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 52.0 | 4.41e-01 | 86.1% | 49.5% |
| 4396346 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.69 | 47.0 | 5.02e-01 | 95.9% | 80.0% |
| 3278244 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.68 | 62.0 | 5.39e-01 | 99.2% | 77.8% |
| 3274159 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 55.0 | 5.72e-01 | 86.9% | 95.7% |
| 4042289 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.67 | 56.0 | 4.41e-01 | 91.0% | 82.7% |
| 3416893 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.67 | 57.0 | 4.60e-01 | 91.8% | 79.1% |
| 3607605 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.67 | 56.0 | 4.63e-01 | 90.2% | 83.3% |
| 4110542 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 47.0 | 4.90e-01 | 98.4% | 80.0% |
| 3407355 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.66 | 57.0 | 5.12e-01 | 93.4% | 98.2% |
| 3627518 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.66 | 53.0 | 4.65e-01 | 86.1% | 85.0% |
| 3541739 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.65 | 47.0 | 4.34e-01 | 98.4% | 58.7% |
| 3400659 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.65 | 56.0 | 5.06e-01 | 93.4% | 98.8% |
| 3405581 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.65 | 55.0 | 4.95e-01 | 91.8% | 100.0% |
| 4437758 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.64 | 46.0 | 4.57e-01 | 74.6% | 95.4% |
| 4117037 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 45.0 | 4.60e-01 | 98.4% | 75.7% |
| 5060402 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.64 | 53.0 | 3.78e-01 | 88.5% | 80.6% |
| 4162026 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 37.0 | 4.69e-01 | 77.0% | 100.0% |
| 4213616 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 45.0 | 4.96e-01 | 98.4% | 93.7% |
| 4937592 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 38.0 | 4.48e-01 | 86.1% | 90.0% |
| 3475000 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 56.0 | 4.54e-01 | 98.4% | 93.5% |
| 4660169 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 44.0 | 4.79e-01 | 98.4% | 92.6% |
| 4043610 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 47.0 | 3.80e-01 | 81.1% | 56.8% |
| 4997258 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.62 | 54.0 | 4.98e-01 | 93.4% | 85.2% |
| 4505973 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.60 | 50.0 | 3.93e-01 | 90.2% | 74.6% |
| 4619476 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.60 | 45.0 | 4.12e-01 | 79.5% | 90.3% |
| 4000167 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.60 | 53.0 | 4.89e-01 | 96.7% | 88.4% |
| 4934092 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.60 | 42.0 | 4.21e-01 | 72.1% | 92.8% |
| 3637634 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 53.0 | 4.79e-01 | 98.4% | 92.9% |
| 4369844 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.60 | 44.0 | 4.05e-01 | 77.0% | 91.8% |
| 3546666 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.59 | 45.0 | 4.09e-01 | 79.5% | 91.4% |
| 4458167 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.59 | 42.0 | 3.79e-01 | 73.0% | 64.8% |
| 4991587 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.59 | 41.0 | 4.06e-01 | 71.3% | 80.0% |
| 4273113 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.58 | 44.0 | 4.00e-01 | 80.3% | 85.9% |
| 4575341 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.58 | 44.0 | 4.09e-01 | 79.5% | 89.6% |
| 3739561 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.58 | 41.0 | 3.72e-01 | 73.8% | 92.3% |
| 4244535 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.58 | 41.0 | 3.69e-01 | 73.8% | 64.7% |
| 3089663 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.57 | 27.0 | 3.12e-01 | 77.9% | 59.8% |
| 3943777 | 7520.1.1.0 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like | 0.57 | 46.0 | 4.37e-01 | 92.6% | 73.1% |
| 4597935 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.57 | 42.0 | 3.87e-01 | 76.2% | 87.1% |
| 5003012 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 47.0 | 3.76e-01 | 88.5% | 88.7% |
| 4019959 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 51.0 | 4.65e-01 | 98.4% | 93.1% |
| 4941507 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.56 | 49.0 | 3.84e-01 | 95.9% | 82.7% |
| 3588369 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.56 | 47.0 | 4.74e-01 | 95.1% | 91.7% |
| 3293558 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.55 | 43.0 | 4.02e-01 | 82.8% | 87.7% |
| 4931190 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.55 | 45.0 | 3.75e-01 | 87.7% | 83.8% |
| 4284604 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.54 | 45.0 | 3.67e-01 | 91.0% | 63.9% |
| 3713681 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.54 | 48.0 | 3.80e-01 | 95.9% | 52.5% |
| 3599361 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 47.0 | 3.89e-01 | 95.9% | 57.3% |
| 3700436 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.54 | 47.0 | 4.33e-01 | 95.9% | 78.8% |
| 3833842 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.53 | 47.0 | 3.83e-01 | 95.9% | 56.0% |
| 4016812 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.53 | 48.0 | 4.43e-01 | 98.4% | 94.8% |
| 4985409 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 43.0 | 3.96e-01 | 96.7% | 67.7% |
| 4864720 | 2485.1.1.35 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › MRP_L53 | 0.53 | 33.0 | 3.56e-01 | 93.4% | 74.3% |
| 4055915 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 46.0 | 4.67e-01 | 95.1% | 95.8% |
| 3416006 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.53 | 46.0 | 3.73e-01 | 94.3% | 73.5% |
| 3703803 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 34.0 | 3.07e-01 | 100.0% | 43.5% |
| 4003033 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.53 | 47.0 | 3.85e-01 | 95.9% | 58.1% |
| 5069531 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 43.0 | 4.04e-01 | 95.9% | 71.3% |
| 4940069 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 44.0 | 4.16e-01 | 98.4% | 74.0% |
| 3498187 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.52 | 45.0 | 3.69e-01 | 95.1% | 74.5% |
| 3783242 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.52 | 45.0 | 3.68e-01 | 94.3% | 71.7% |
| 3788312 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 41.0 | 2.56e-01 | 82.0% | 19.5% |
| 4954519 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.52 | 43.0 | 3.99e-01 | 98.4% | 69.7% |
| 3692925 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.52 | 47.0 | 4.33e-01 | 98.4% | 100.0% |
| 3486916 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 33.0 | 3.71e-01 | 95.1% | 83.2% |
| 4578666 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 45.0 | 4.48e-01 | 94.3% | 96.8% |
| 4965528 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 3.59e-01 | 92.6% | 71.1% |
| 3788326 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.52 | 40.0 | 2.41e-01 | 82.8% | 55.2% |
| 3241140 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.51 | 41.0 | 2.61e-01 | 86.9% | 94.3% |
| 4059727 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.51 | 45.0 | 4.03e-01 | 98.4% | 70.3% |
| 4449349 | 2003.1.5.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › EcoRI_methylase | 0.51 | 39.0 | 2.95e-01 | 97.5% | 32.8% |
| 5043115 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.51 | 44.0 | 3.96e-01 | 97.5% | 68.2% |
| 4991987 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.51 | 44.0 | 3.88e-01 | 95.9% | 64.4% |
| 5030774 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.50 | 45.0 | 3.97e-01 | 98.4% | 67.8% |