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NC_004735.1__NP_835661.1__Rm378p074__00074
Bact-VirNC_004735.1__NP_835661.1__Rm378p074__00074
Identity
- Accession:
- NC_004735 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Cluster
View cluster (28 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-104
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_75050_prodigal-single.1__X__X__00028__D32-119
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6fucA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.74 | 57.0 | 6.00e-01 | 80.4% | 97.7% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.74 | 45.0 | 4.76e-01 | 97.9% | 68.2% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.72 | 58.0 | 6.02e-01 | 92.8% | 92.1% |
| 5mw8A01 | 3.30.200.110 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe | 0.71 | 49.0 | 4.68e-01 | 71.1% | 100.0% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.71 | 60.0 | 6.24e-01 | 91.8% | 95.6% |
| 6ziwI01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.71 | 54.0 | 5.93e-01 | 92.8% | 100.0% |
| 6vp6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.70 | 53.0 | 5.65e-01 | 94.8% | 92.8% |
| 5gz8A00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.70 | 53.0 | 3.81e-01 | 96.9% | 28.7% |
| 3d7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 53.0 | 5.72e-01 | 94.8% | 97.5% |
| 2x7gA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 52.0 | 5.42e-01 | 81.4% | 100.0% |
| 3i1aA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 52.0 | 5.11e-01 | 83.5% | 99.0% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 54.0 | 5.73e-01 | 99.0% | 100.0% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.65 | 45.0 | 5.05e-01 | 93.8% | 94.6% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.65 | 56.0 | 4.76e-01 | 93.8% | 92.2% |
| 5ighA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 50.0 | 5.23e-01 | 89.7% | 92.0% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.63 | 44.0 | 4.17e-01 | 73.2% | 69.4% |
| 2gqrA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 50.0 | 5.01e-01 | 92.8% | 83.0% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.62 | 54.0 | 4.81e-01 | 94.8% | 92.1% |
| 6j5tB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 51.0 | 4.76e-01 | 89.7% | 75.0% |
| 4c26A00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.62 | 35.0 | 4.07e-01 | 80.4% | 80.3% |
| 2nryD01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 51.0 | 5.25e-01 | 90.7% | 95.7% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 42.0 | 4.83e-01 | 83.5% | 97.2% |
| 4o1pD02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 55.0 | 4.06e-01 | 100.0% | 42.3% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.60 | 41.0 | 3.14e-01 | 71.1% | 88.2% |
| 3uc4A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 45.0 | 4.81e-01 | 80.4% | 100.0% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.59 | 43.0 | 3.47e-01 | 76.3% | 51.1% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.59 | 38.0 | 3.63e-01 | 87.6% | 55.2% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 42.0 | 3.83e-01 | 76.3% | 71.4% |
| 5c3vA01 | 3.30.800.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta | 0.58 | 49.0 | 4.11e-01 | 92.8% | 95.2% |
| 1lc5A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 39.0 | 3.63e-01 | 70.1% | 56.0% |
| 2ppqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 48.0 | 4.91e-01 | 92.8% | 93.6% |
| 3d6kA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 39.0 | 3.30e-01 | 70.1% | 50.9% |
| 2qmaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 39.0 | 3.66e-01 | 73.2% | 64.8% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 39.0 | 3.65e-01 | 73.2% | 72.0% |
| 3getA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 38.0 | 3.88e-01 | 70.1% | 74.5% |
| 6fmeA03 | 2.20.220.10 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › alpha-Amylases | 0.56 | 31.0 | 3.77e-01 | 96.9% | 85.5% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 40.0 | 3.67e-01 | 76.3% | 70.0% |
| 3fo5B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 49.0 | 3.71e-01 | 99.0% | 71.7% |
| 2hoxA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 37.0 | 3.59e-01 | 71.1% | 79.6% |
| 2zc0A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 36.0 | 3.05e-01 | 70.1% | 42.5% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 4.05e-01 | 83.5% | 82.2% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.53 | 38.0 | 3.75e-01 | 92.8% | 70.6% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 40.0 | 3.68e-01 | 81.4% | 90.7% |
| 2avtA02 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 41.0 | 3.26e-01 | 83.5% | 97.5% |
| 4btfA03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 43.0 | 4.12e-01 | 95.9% | 77.7% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 38.0 | 3.50e-01 | 76.3% | 80.0% |
| 4dnuA00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.52 | 41.0 | 2.79e-01 | 85.6% | 24.5% |
| 3m07A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 35.0 | 3.95e-01 | 95.9% | 98.6% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.50 | 36.0 | 3.66e-01 | 84.5% | 76.8% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3722388 | 206.1.1.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF3669 | 0.83 | 59.0 | 4.18e-01 | 73.2% | 41.5% |
| 4022985 | 206.1.1.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF3669 | 0.80 | 58.0 | 3.87e-01 | 74.2% | 60.6% |
| 5008026 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.76 | 56.0 | 4.55e-01 | 99.0% | 42.9% |
| 4972317 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.74 | 61.0 | 4.47e-01 | 87.6% | 36.5% |
| 5032985 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.74 | 58.0 | 4.26e-01 | 82.5% | 35.8% |
| 4434453 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.73 | 51.0 | 3.83e-01 | 71.1% | 46.2% |
| 3728477 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.73 | 59.0 | 4.33e-01 | 85.6% | 36.2% |
| 2462240 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.73 | 58.0 | 4.17e-01 | 84.5% | 33.3% |
| 4950477 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.72 | 51.0 | 5.73e-01 | 99.0% | 94.7% |
| 3787893 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.72 | 57.0 | 3.91e-01 | 83.5% | 33.2% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.72 | 49.0 | 5.54e-01 | 96.9% | 95.7% |
| 3409868 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.72 | 62.0 | 4.31e-01 | 97.9% | 29.3% |
| 3727614 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.71 | 59.0 | 4.24e-01 | 97.9% | 33.1% |
| 4277447 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.71 | 63.0 | 4.83e-01 | 96.9% | 45.1% |
| 3535717 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.71 | 56.0 | 3.84e-01 | 97.9% | 24.8% |
| 4072406 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.71 | 52.0 | 3.88e-01 | 77.3% | 35.3% |
| 3814388 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.70 | 57.0 | 3.80e-01 | 87.6% | 24.0% |
| 4951170 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.70 | 47.0 | 5.40e-01 | 95.9% | 95.7% |
| None | — | 0.70 | 54.0 | 3.73e-01 | 94.8% | 24.6% | |
| 1308491 | 206.1.1.18 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › AceK_kinase | 0.70 | 50.0 | 4.08e-01 | 74.2% | 60.3% |
| 3222419 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.70 | 40.0 | 4.49e-01 | 86.6% | 73.3% |
| 3473901 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.69 | 54.0 | 3.65e-01 | 94.8% | 23.5% |
| None | — | 0.69 | 56.0 | 4.81e-01 | 95.9% | 55.9% | |
| 4958423 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.68 | 54.0 | 4.15e-01 | 84.5% | 54.4% |
| 3773541 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.68 | 57.0 | 3.90e-01 | 89.7% | 30.5% |
| 3871111 | 206.1.1.262 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Mad3_BUB1_I | 0.68 | 55.0 | 3.40e-01 | 87.6% | 34.3% |
| 3284426 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.66 | 55.0 | 3.97e-01 | 97.9% | 32.8% |
| 3106398 | 206.1.2.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK | 0.66 | 47.0 | 3.60e-01 | 74.2% | 78.3% |
| 5046089 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.66 | 53.0 | 3.90e-01 | 86.6% | 37.1% |
| 4947529 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.66 | 55.0 | 4.07e-01 | 91.8% | 35.6% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.65 | 39.0 | 3.32e-01 | 83.5% | 38.7% |
| 3975695 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.64 | 53.0 | 3.82e-01 | 88.7% | 34.1% |
| 3258903 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.64 | 55.0 | 4.00e-01 | 96.9% | 34.6% |
| 3457086 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.64 | 54.0 | 3.87e-01 | 94.8% | 31.6% |
| 4064881 | 241.1.1.7 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Type_III_SycN | 0.63 | 45.0 | 4.15e-01 | 73.2% | 68.3% |
| 3971872 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.63 | 44.0 | 4.11e-01 | 73.2% | 68.3% |
| 3659272 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.63 | 57.0 | 4.05e-01 | 100.0% | 35.4% |
| 3723566 | 206.1.1.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF3669 | 0.62 | 57.0 | 3.81e-01 | 100.0% | 40.5% |
| None | — | 0.62 | 48.0 | 3.38e-01 | 94.8% | 26.8% | |
| 2410067 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.61 | 37.0 | 4.52e-01 | 83.5% | 96.7% |
| 1166198 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.61 | 55.0 | 4.85e-01 | 97.9% | 89.3% |
| 3305609 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.61 | 39.0 | 4.28e-01 | 88.7% | 78.8% |
| 2075069 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.61 | 54.0 | 3.49e-01 | 95.9% | 29.7% |
| 4649120 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.60 | 54.0 | 3.84e-01 | 97.9% | 43.2% |
| 3210081 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.60 | 55.0 | 3.63e-01 | 100.0% | 24.6% |
| 3511696 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.60 | 37.0 | 4.34e-01 | 86.6% | 87.1% |
| 3476809 | 206.1.2.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK | 0.60 | 51.0 | 3.65e-01 | 93.8% | 75.1% |
| 4583055 | 316.1.1.11 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GrpB | 0.60 | 54.0 | 4.58e-01 | 100.0% | 78.1% |
| 3925827 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 53.0 | 4.04e-01 | 99.0% | 78.2% |
| 4938623 | 881.1.1.45 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF26686 | 0.59 | 44.0 | 3.83e-01 | 80.4% | 79.1% |
| 3417366 | 312.1.1.19 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 | 0.59 | 53.0 | 4.66e-01 | 97.9% | 94.3% |
| 3496279 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.59 | 54.0 | 3.43e-01 | 100.0% | 29.3% |
| 1003933 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.59 | 38.0 | 3.63e-01 | 87.6% | 55.2% |
| 3265830 | 241.6.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc | 0.59 | 41.0 | 3.92e-01 | 73.2% | 70.4% |
| 5000056 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 40.0 | 3.73e-01 | 92.8% | 57.5% |
| 5006395 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.57 | 43.0 | 4.55e-01 | 100.0% | 92.9% |
| 3972677 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.57 | 52.0 | 3.74e-01 | 99.0% | 43.0% |
| 3214663 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.57 | 39.0 | 3.52e-01 | 92.8% | 52.3% |
| 5036255 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.55 | 41.0 | 3.93e-01 | 79.4% | 78.3% |
| 3580620 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.55 | 45.0 | 3.69e-01 | 87.6% | 66.3% |
| 3854043 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.55 | 49.0 | 3.80e-01 | 99.0% | 77.2% |
| 4954483 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 44.0 | 4.11e-01 | 88.7% | 83.2% |
| 5028231 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.54 | 40.0 | 3.80e-01 | 100.0% | 66.4% |
| 3579622 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 36.0 | 3.47e-01 | 91.8% | 61.8% |
| 3644180 | 5.1.5.98 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like | 0.53 | 39.0 | 2.69e-01 | 77.3% | 86.9% |
| 4026368 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.52 | 45.0 | 3.55e-01 | 97.9% | 70.2% |
| 5065774 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 45.0 | 4.52e-01 | 94.8% | 100.0% |
| 5030147 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 44.0 | 3.91e-01 | 96.9% | 85.5% |
| 3430344 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 44.0 | 3.03e-01 | 100.0% | 25.1% |
| 4964031 | 7089.1.1.7 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF7543 | 0.51 | 34.0 | 3.91e-01 | 92.8% | 95.7% |
| 3267885 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.51 | 41.0 | 3.65e-01 | 93.8% | 62.2% |
| 4228206 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 38.0 | 4.15e-01 | 90.7% | 95.0% |
| 4931854 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.50 | 39.0 | 3.64e-01 | 100.0% | 65.6% |
D2
high
residues 107-208
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gkfA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.59 | 48.0 | 4.30e-01 | 90.2% | 100.0% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.57 | 44.0 | 4.34e-01 | 86.3% | 100.0% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 48.0 | 4.79e-01 | 98.0% | 94.2% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.53 | 36.0 | 3.58e-01 | 87.3% | 66.7% |
| 2ig3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 37.0 | 3.52e-01 | 73.5% | 92.9% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.52 | 44.0 | 4.40e-01 | 100.0% | 91.7% |
| 2btdA00 | 1.25.40.340 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain | 0.52 | 39.0 | 3.11e-01 | 79.4% | 80.4% |
| 3qx3A04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.51 | 42.0 | 4.26e-01 | 99.0% | 92.0% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 35.0 | 3.68e-01 | 73.5% | 76.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4967801 | 3921.1.1.1 ↗ | alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Rnf-Nqr | 0.58 | 49.0 | 4.16e-01 | 96.1% | 97.8% |
| 3929192 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.57 | 42.0 | 4.38e-01 | 78.4% | 98.9% |
| 3813578 | 1188.1.1.1 ↗ | alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip | 0.53 | 37.0 | 2.81e-01 | 72.5% | 79.2% |
| 4958586 | 1079.1.1.5 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 | 0.51 | 42.0 | 3.39e-01 | 95.1% | 88.9% |