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NC_004820.1__NP_852492.1__BC1858__00012

Bact-Vir

NC_004820.1__NP_852492.1__BC1858__00012

Identity

Accession:
NC_004820 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_phBC6A51

TaxID: 225725

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-83
PDB
Domain cluster: rep: KT624200.1__AMM45012.1__SP15_212__00214__D38-117
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.83 67.0 6.18e-01 100.0% 67.9%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 52.0 4.73e-01 100.0% 51.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 50.0 5.45e-01 100.0% 82.1%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 47.0 5.46e-01 95.5% 91.3%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 53.0 5.68e-01 100.0% 86.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 48.0 5.10e-01 100.0% 79.7%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 45.0 5.10e-01 94.0% 89.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.70 52.0 5.29e-01 100.0% 80.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 47.0 5.06e-01 100.0% 87.0%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.69 46.0 3.89e-01 92.5% 42.3%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.66 54.0 3.82e-01 100.0% 28.6%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.66 55.0 4.88e-01 100.0% 62.9%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.66 46.0 4.01e-01 73.1% 64.4%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.66 54.0 4.37e-01 88.1% 73.0%
4nyqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 49.0 3.77e-01 85.1% 71.2%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 4.94e-01 100.0% 87.5%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 43.0 4.06e-01 89.6% 61.3%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.61 53.0 3.99e-01 100.0% 81.1%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.23e-01 100.0% 64.0%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 41.0 2.88e-01 71.6% 69.3%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.60 45.0 3.40e-01 83.6% 65.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 48.0 3.46e-01 89.6% 78.4%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 51.0 3.87e-01 100.0% 67.5%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.58 44.0 3.00e-01 83.6% 86.9%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 3.98e-01 100.0% 74.8%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 46.0 4.73e-01 95.5% 95.4%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.56 48.0 3.93e-01 100.0% 99.2%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 49.0 4.56e-01 100.0% 79.5%
4ybvA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 44.0 3.63e-01 88.1% 95.0%
3gekA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 44.0 3.54e-01 88.1% 80.2%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.54 45.0 3.49e-01 98.5% 69.9%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 38.0 2.71e-01 76.1% 59.1%
1q4tA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 44.0 3.42e-01 89.6% 75.4%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.74e-01 100.0% 76.4%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 43.0 2.88e-01 94.0% 67.3%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.63e-01 100.0% 100.0%
1a41A01 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.52 43.0 3.59e-01 95.5% 52.0%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 3.81e-01 100.0% 87.9%
2qqpA03 2.60.40.4260 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 43.0 3.45e-01 94.0% 75.9%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.42e-01 94.0% 84.8%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.70e-01 100.0% 83.8%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.51 42.0 2.95e-01 95.5% 31.1%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 44.0 3.06e-01 100.0% 29.1%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4426276 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 70.0 6.96e-01 97.0% 84.3%
2321269 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.83 67.0 6.18e-01 100.0% 67.9%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 6.12e-01 100.0% 87.3%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 57.0 5.84e-01 100.0% 83.1%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.01e-01 100.0% 62.5%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.73 55.0 4.36e-01 100.0% 40.0%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.72 57.0 5.50e-01 98.5% 76.0%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 4.98e-01 100.0% 66.3%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 54.0 5.46e-01 100.0% 84.6%
4015238 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.71 50.0 4.09e-01 100.0% 40.0%
3241890 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 4.95e-01 100.0% 58.0%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.62e-01 100.0% 89.1%
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.70 52.0 5.33e-01 100.0% 81.5%
4283343 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 58.0 5.50e-01 100.0% 77.5%
3770448 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.69 46.0 3.45e-01 70.1% 78.8%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.69 48.0 3.60e-01 82.1% 30.6%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.68 53.0 5.45e-01 100.0% 89.2%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 61.0 5.43e-01 100.0% 75.8%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.12e-01 100.0% 71.8%
3590884 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.67 55.0 4.36e-01 100.0% 45.1%
185736 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.67 54.0 3.77e-01 100.0% 26.5%
3834112 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 60.0 5.69e-01 100.0% 90.0%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 5.33e-01 100.0% 89.2%
3459099 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.66 59.0 5.10e-01 100.0% 65.7%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.73e-01 100.0% 76.9%
4278184 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.66 52.0 4.94e-01 100.0% 73.8%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 45.0 4.63e-01 100.0% 76.9%
3941170 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.65 50.0 4.98e-01 98.5% 81.4%
5042986 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 5.17e-01 98.5% 93.3%
3807651 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.65 56.0 4.83e-01 100.0% 67.3%
3310575 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.65 57.0 4.96e-01 100.0% 73.3%
3244773 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.64 46.0 3.09e-01 100.0% 19.6%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.64 50.0 4.95e-01 100.0% 81.4%
3784612 219.1.1.115 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C 0.64 56.0 4.20e-01 100.0% 40.0%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.63 49.0 4.79e-01 98.5% 77.3%
3363448 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 51.0 4.77e-01 100.0% 70.6%
3480657 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 4.57e-01 100.0% 65.6%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 56.0 4.57e-01 100.0% 57.6%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 56.0 5.34e-01 100.0% 90.0%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 51.0 4.71e-01 100.0% 68.9%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 52.0 5.28e-01 98.5% 93.8%
4882197 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.63 53.0 4.49e-01 100.0% 55.9%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.63 56.0 4.41e-01 100.0% 51.4%
3243255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.49e-01 82.1% 82.7%
5039728 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.60 49.0 3.34e-01 88.1% 42.1%
3425872 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.60 53.0 4.83e-01 98.5% 80.0%
3780974 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.60 49.0 3.23e-01 88.1% 32.8%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 55.0 5.04e-01 100.0% 84.7%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.73e-01 100.0% 81.3%
3723768 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 46.0 4.22e-01 100.0% 63.3%
3890362 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.69e-01 86.6% 85.7%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.63e-01 100.0% 82.7%
3566074 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 48.0 3.14e-01 89.6% 31.0%
5070306 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.41e-01 100.0% 79.0%
3266702 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 47.0 4.29e-01 95.5% 65.6%
5044392 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 40.0 4.39e-01 94.0% 89.1%
3532192 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 48.0 4.10e-01 100.0% 86.7%
3786518 4.8.1.18 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N 0.57 44.0 4.49e-01 97.0% 90.8%
3263955 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 48.0 4.01e-01 100.0% 69.0%
3268923 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 45.0 3.90e-01 100.0% 55.2%
5044394 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 37.0 4.24e-01 76.1% 100.0%
5044391 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 39.0 4.37e-01 92.5% 98.0%
3816594 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.56 49.0 3.38e-01 100.0% 50.8%
3469033 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 49.0 3.33e-01 100.0% 48.4%
3680919 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 47.0 4.01e-01 100.0% 91.3%
5029975 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.53 47.0 4.14e-01 98.5% 80.0%
3182025 4.1.1.475 ↗ beta barrels › SH3 › SH3 › SH3 › PF26640 0.53 45.0 3.66e-01 100.0% 48.1%
3197517 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.53 44.0 3.81e-01 100.0% 58.5%
4002813 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 44.0 3.59e-01 100.0% 67.9%
3605064 5.1.4.74 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.53 42.0 2.55e-01 89.6% 27.4%
3241614 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 43.0 3.53e-01 100.0% 71.7%
3890276 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.52 44.0 4.20e-01 94.0% 83.7%