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NC_004820.1__NP_852541.1__BC1907__00061
Bact-VirNC_004820.1__NP_852541.1__BC1907__00061
Identity
- Accession:
- NC_004820 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-60
Domain cluster:
rep: ON699007.1__UTQ79955.1__BC1_00003__00003__D2-60
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vqzA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.77 | 49.0 | 4.24e-01 | 81.4% | 43.2% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 40.0 | 3.40e-01 | 74.6% | 35.1% |
| 4q6lA00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.67 | 56.0 | 4.32e-01 | 94.9% | 99.3% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.64 | 51.0 | 4.23e-01 | 88.1% | 56.6% |
| 3hi0A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 43.0 | 3.43e-01 | 74.6% | 35.9% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.63 | 41.0 | 3.21e-01 | 81.4% | 30.1% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 43.0 | 3.66e-01 | 78.0% | 42.9% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.62 | 47.0 | 3.82e-01 | 84.7% | 42.7% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 45.0 | 3.62e-01 | 78.0% | 40.9% |
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.61 | 53.0 | 3.52e-01 | 94.9% | 42.1% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.61 | 49.0 | 4.18e-01 | 96.6% | 53.9% |
| 5kkuD00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.61 | 51.0 | 3.37e-01 | 100.0% | 26.4% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 50.0 | 3.78e-01 | 94.9% | 90.8% |
| 1su0B00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.60 | 40.0 | 3.17e-01 | 79.7% | 30.1% |
| 2va0A00 | 3.30.450.160 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 49.0 | 4.13e-01 | 89.8% | 100.0% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 47.0 | 4.69e-01 | 91.5% | 96.7% |
| 3cwvA02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.59 | 53.0 | 3.93e-01 | 100.0% | 67.5% |
| 4ufcA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.59 | 49.0 | 3.15e-01 | 100.0% | 26.9% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.58 | 49.0 | 3.70e-01 | 100.0% | 82.6% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.58 | 41.0 | 3.48e-01 | 78.0% | 92.5% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 51.0 | 4.42e-01 | 100.0% | 70.7% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.24e-01 | 89.8% | 32.3% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 48.0 | 3.05e-01 | 98.3% | 31.3% |
| 3d4eA02 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.57 | 43.0 | 3.96e-01 | 84.7% | 62.8% |
| 3gocA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.56 | 48.0 | 3.20e-01 | 94.9% | 32.5% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.56 | 46.0 | 3.62e-01 | 96.6% | 89.4% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 47.0 | 3.06e-01 | 100.0% | 21.6% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.56 | 48.0 | 3.70e-01 | 100.0% | 76.2% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 37.0 | 3.32e-01 | 76.3% | 46.5% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 40.0 | 2.76e-01 | 78.0% | 21.7% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 41.0 | 2.66e-01 | 86.4% | 42.9% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 46.0 | 3.27e-01 | 96.6% | 50.2% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.55 | 47.0 | 4.28e-01 | 100.0% | 72.6% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 44.0 | 2.96e-01 | 100.0% | 23.4% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 47.0 | 3.04e-01 | 100.0% | 22.1% |
| 4l1nA00 | 2.40.128.660 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 | 0.55 | 45.0 | 3.45e-01 | 100.0% | 36.6% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.55 | 48.0 | 3.26e-01 | 100.0% | 32.7% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.13e-01 | 79.7% | 77.5% |
| 4hrvA00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.55 | 44.0 | 3.57e-01 | 100.0% | 76.3% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 46.0 | 3.72e-01 | 98.3% | 78.3% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 47.0 | 3.93e-01 | 96.6% | 57.8% |
| 4zwnB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 37.0 | 2.47e-01 | 76.3% | 84.9% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.74e-01 | 100.0% | 16.2% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 43.0 | 3.25e-01 | 96.6% | 36.5% |
| 7szeB02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.53 | 43.0 | 3.11e-01 | 93.2% | 37.5% |
| 3ir3A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 43.0 | 3.56e-01 | 100.0% | 54.0% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 42.0 | 2.73e-01 | 98.3% | 26.2% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.91e-01 | 94.9% | 76.1% |
| 3b5hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.94e-01 | 100.0% | 91.5% |
| 2jheA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 37.0 | 3.17e-01 | 81.4% | 81.5% |
| 4opmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 37.0 | 2.49e-01 | 83.1% | 25.8% |
| 6i8wB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 37.0 | 2.47e-01 | 83.1% | 25.4% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 42.0 | 3.81e-01 | 100.0% | 80.9% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.05e-01 | 94.9% | 59.4% |
| 2f8xC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.65e-01 | 100.0% | 89.4% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 43.0 | 4.30e-01 | 94.9% | 93.3% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 40.0 | 2.68e-01 | 100.0% | 20.7% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.50 | 39.0 | 3.25e-01 | 93.2% | 79.2% |
| 2hzrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 40.0 | 3.06e-01 | 94.9% | 67.7% |
| 2ykfA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 43.0 | 3.29e-01 | 100.0% | 76.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3903950 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.80 | 52.0 | 4.27e-01 | 76.3% | 38.1% |
| 3929202 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.78 | 53.0 | 4.33e-01 | 76.3% | 40.0% |
| 3845827 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.76 | 50.0 | 3.88e-01 | 76.3% | 32.0% |
| 4992459 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.72 | 48.0 | 4.59e-01 | 98.3% | 58.6% |
| 3998891 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.71 | 54.0 | 3.63e-01 | 88.1% | 21.8% |
| 4796553 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 43.0 | 4.43e-01 | 71.2% | 72.2% |
| 5024225 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.66 | 49.0 | 3.20e-01 | 83.1% | 56.7% |
| 3983642 | 220.1.1.73 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3461 | 0.65 | 50.0 | 4.41e-01 | 100.0% | 55.6% |
| 3980835 | 11.1.1.997 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_J | 0.64 | 55.0 | 4.61e-01 | 100.0% | 81.9% |
| 3361063 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.63 | 43.0 | 2.87e-01 | 91.5% | 16.5% |
| 5081581 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 54.0 | 3.67e-01 | 100.0% | 31.3% |
| 3962989 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.62 | 52.0 | 4.50e-01 | 100.0% | 89.0% |
| 3503973 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 47.0 | 3.78e-01 | 88.1% | 79.2% |
| 5047088 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.61 | 51.0 | 3.59e-01 | 100.0% | 34.1% |
| 3582195 | 12.3.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N | 0.60 | 50.0 | 3.42e-01 | 100.0% | 83.5% |
| 2833528 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.59 | 51.0 | 3.02e-01 | 100.0% | 14.8% |
| 4942674 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.59 | 42.0 | 4.02e-01 | 74.6% | 94.1% |
| 3992824 | 11.1.1.532 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 | 0.59 | 46.0 | 4.10e-01 | 89.8% | 74.4% |
| 3963078 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.58 | 52.0 | 4.62e-01 | 100.0% | 74.1% |
| 5063650 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.58 | 49.0 | 3.69e-01 | 100.0% | 51.8% |
| 4000095 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 4.19e-01 | 94.9% | 76.7% |
| 3215886 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 49.0 | 3.74e-01 | 100.0% | 78.0% |
| 4541933 | 223.1.1.43 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CusS | 0.58 | 49.0 | 3.58e-01 | 94.9% | 75.0% |
| 5069545 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.57 | 48.0 | 3.29e-01 | 93.2% | 28.8% |
| 3475203 | 11.1.1.469 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3_4 | 0.57 | 48.0 | 3.89e-01 | 100.0% | 78.4% |
| 4199524 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.57 | 46.0 | 3.13e-01 | 91.5% | 97.9% |
| 4944954 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.56 | 47.0 | 3.20e-01 | 93.2% | 30.7% |
| 3699929 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 46.0 | 3.40e-01 | 94.9% | 98.8% |
| 4113597 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.56 | 46.0 | 4.11e-01 | 100.0% | 94.7% |
| 3628233 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.34e-01 | 98.3% | 90.0% |
| 4114495 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.56 | 47.0 | 3.18e-01 | 93.2% | 29.0% |
| 4969245 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 46.0 | 3.54e-01 | 100.0% | 41.3% |
| 4989448 | 223.1.1.20 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3365 | 0.55 | 47.0 | 3.70e-01 | 100.0% | 95.6% |
| 3375447 | 274.1.1.46 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › CcmF_C | 0.55 | 38.0 | 3.31e-01 | 76.3% | 57.1% |
| 3231135 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 46.0 | 3.85e-01 | 96.6% | 77.3% |
| 5016022 | 223.1.1.157 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_3 | 0.55 | 45.0 | 3.50e-01 | 94.9% | 72.9% |
| 3970689 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 44.0 | 3.56e-01 | 93.2% | 98.4% |
| 1140882 | 5.1.3.24 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › End_beta_propel | 0.55 | 45.0 | 3.81e-01 | 98.3% | 59.8% |
| 2394565 | 9.30.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › PknI kinase extracellular sensor domain › PknI kinase extracellular sensor domain › PF31220 | 0.55 | 47.0 | 3.44e-01 | 96.6% | 68.6% |
| 5012803 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 48.0 | 3.60e-01 | 98.3% | 44.8% |
| 3989882 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.53 | 42.0 | 3.72e-01 | 86.4% | 92.9% |
| 3348558 | 11.1.1.1090 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_M1 | 0.53 | 45.0 | 3.55e-01 | 100.0% | 83.1% |
| 4930498 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 37.0 | 3.23e-01 | 78.0% | 90.0% |
| 4348163 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.52 | 36.0 | 3.09e-01 | 76.3% | 80.9% |
| 5067458 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 42.0 | 4.39e-01 | 100.0% | 98.2% |
| 4940634 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.52 | 39.0 | 3.10e-01 | 88.1% | 40.0% |
| 4632674 | 223.1.1.171 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_3-Cache_2 | 0.51 | 41.0 | 3.41e-01 | 91.5% | 80.9% |
| 4015564 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.51 | 41.0 | 2.74e-01 | 100.0% | 21.3% |
| 3998298 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 2.82e-01 | 89.8% | 38.1% |
| 1244069 | 243.1.1.27 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4348 | 0.50 | 39.0 | 3.26e-01 | 88.1% | 68.5% |
| 3965912 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 36.0 | 3.17e-01 | 78.0% | 75.8% |
| 5036656 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 41.0 | 4.08e-01 | 96.6% | 98.3% |
D2
medium
residues 102-172
Domain cluster:
rep: PP028463.1__WQZ01562.1__DDLHHHOO_00074__00073__D111-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22768.2 best | SPP1_Dit | 46.5 | 4.70e-12 | 95.8% | 63.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888733 | 10.29.1.2 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins › Siphovirus-type_tail_C | 0.70 | 61.0 | 5.42e-01 | 94.4% | 75.8% |
| 4113536 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 40.0 | 3.16e-01 | 76.1% | 46.9% |
| 3234953 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.55 | 42.0 | 3.00e-01 | 81.7% | 64.2% |
| 3645253 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.54 | 41.0 | 2.76e-01 | 83.1% | 83.8% |
| 5025277 | 284.1.1.13 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP-like_N | 0.52 | 35.0 | 3.83e-01 | 80.3% | 90.9% |
| 3708351 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 39.0 | 2.65e-01 | 87.3% | 82.8% |