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NC_005260.1__NP_943934.1__Aeh1p056__00056

Bact-Vir

NC_005260.1__NP_943934.1__Aeh1p056__00056

Identity

Accession:
NC_005260 ↗
Kingdom:
phage

Quality

54.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Cinqassovirus› Aeromonas_phage_Aeh1

TaxID: 2880362

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-82
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.79 49.0 5.82e-01 80.0% 94.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.75 48.0 5.65e-01 80.0% 98.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 48.0 4.67e-01 82.7% 60.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 41.0 4.92e-01 78.7% 97.9%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.63 48.0 4.25e-01 81.3% 68.5%
2vifA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 47.0 3.95e-01 80.0% 68.3%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.62 56.0 5.11e-01 100.0% 87.8%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 48.0 3.91e-01 85.3% 64.4%
2knoA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 45.0 4.00e-01 77.3% 78.2%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 41.0 4.18e-01 81.3% 69.9%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 3.93e-01 84.0% 58.1%
3v0aB04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 45.0 3.61e-01 81.3% 94.2%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 44.0 4.12e-01 80.0% 73.7%
7asgA01 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.59 43.0 3.61e-01 77.3% 69.2%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 4.18e-01 89.3% 86.9%
5wt7A00 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.58 43.0 3.52e-01 78.7% 65.7%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 4.21e-01 94.7% 83.3%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 4.14e-01 90.7% 97.2%
2n93A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.77e-01 85.3% 66.9%
2m4lA00 2.40.128.360 Mainly Beta › Beta Barrel › Lipocalin › 0.56 43.0 3.95e-01 84.0% 74.7%
1fbnA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 34.0 3.95e-01 77.3% 92.2%
1oqkA00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.55 45.0 4.46e-01 90.7% 96.2%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 43.0 4.59e-01 97.3% 100.0%
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.53 40.0 3.70e-01 85.3% 70.6%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 45.0 3.71e-01 100.0% 83.5%
2kcjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.87e-01 98.7% 90.7%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 38.0 3.35e-01 82.7% 83.7%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 45.0 4.13e-01 98.7% 76.8%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2697704 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.81 52.0 5.56e-01 82.7% 75.4%
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 47.0 5.92e-01 86.7% 100.0%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.78 49.0 5.45e-01 82.7% 80.0%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 50.0 5.75e-01 80.0% 90.9%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 50.0 5.81e-01 81.3% 90.9%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.77 51.0 5.29e-01 82.7% 72.9%
5043091 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.77 51.0 5.33e-01 82.7% 75.0%
4937423 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 59.0 5.70e-01 82.7% 80.0%
5034254 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 51.0 5.41e-01 82.7% 78.5%
4936253 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 50.0 5.24e-01 82.7% 72.9%
4662947 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.76 49.0 5.29e-01 82.7% 76.9%
3839083 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 50.0 5.21e-01 82.7% 72.9%
4937586 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 50.0 5.37e-01 81.3% 78.5%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 52.0 5.97e-01 82.7% 96.4%
4611708 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.76 49.0 5.44e-01 82.7% 83.3%
4959192 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 50.0 5.35e-01 82.7% 78.5%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 50.0 5.73e-01 82.7% 92.7%
4347999 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.75 49.0 5.24e-01 82.7% 76.9%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.75 50.0 5.33e-01 82.7% 78.5%
5050433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 45.0 5.52e-01 85.3% 100.0%
4937178 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.75 50.0 5.32e-01 82.7% 78.5%
4979962 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.75 47.0 5.04e-01 78.7% 73.8%
5076401 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 49.0 5.11e-01 82.7% 72.9%
3989139 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.74 48.0 5.18e-01 82.7% 76.9%
4938120 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 49.0 5.12e-01 82.7% 72.9%
5028692 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 49.0 5.26e-01 82.7% 78.5%
4955296 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 49.0 5.25e-01 82.7% 78.5%
5040230 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 50.0 5.34e-01 82.7% 80.0%
4968248 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 49.0 5.09e-01 82.7% 72.9%
4932588 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.74 49.0 5.19e-01 82.7% 78.5%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 50.0 5.74e-01 82.7% 96.4%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 50.0 5.75e-01 82.7% 96.4%
5029186 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.73 49.0 5.20e-01 82.7% 78.5%
3278801 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.73 48.0 5.10e-01 82.7% 76.9%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.73 51.0 5.46e-01 98.7% 83.1%
3248413 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.72 50.0 4.06e-01 72.0% 51.9%
5017848 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 49.0 5.04e-01 98.7% 77.1%
3967232 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.68 52.0 4.48e-01 82.7% 88.3%
3945059 9.1.1.6 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE 0.67 52.0 4.68e-01 84.0% 95.2%
4172306 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.64 57.0 5.25e-01 97.3% 82.1%
3441976 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.64 54.0 4.44e-01 92.0% 56.3%
5068429 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.64 57.0 5.07e-01 97.3% 74.0%
2426533 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.64 56.0 4.51e-01 97.3% 55.9%
4025002 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.64 56.0 4.66e-01 97.3% 61.5%
4251253 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.64 56.0 4.99e-01 97.3% 85.7%
5022234 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.62 53.0 5.29e-01 94.7% 94.9%
3192003 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 49.0 3.87e-01 89.3% 74.4%
3238003 241.4.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.61 46.0 3.79e-01 81.3% 76.3%
4403811 241.4.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 0.60 45.0 3.91e-01 81.3% 78.3%
4281428 241.4.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.60 45.0 3.79e-01 81.3% 77.7%
3883554 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 48.0 4.23e-01 89.3% 80.0%
5012884 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 53.0 4.98e-01 100.0% 86.7%
3226293 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.59 44.0 3.05e-01 80.0% 31.5%
3361876 241.4.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.58 44.0 3.74e-01 81.3% 67.2%
3222725 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.58 45.0 3.07e-01 85.3% 37.3%
4993812 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 42.0 3.93e-01 74.7% 77.8%
4683074 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.57 43.0 3.49e-01 82.7% 92.0%
5050410 325.1.7.12 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › ATP-synt_ab_Xtn 0.56 40.0 4.07e-01 74.7% 93.3%
3557363 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 3.86e-01 94.7% 80.0%
3584648 241.4.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.54 46.0 3.80e-01 94.7% 93.6%
5036912 325.1.7.12 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › ATP-synt_ab_Xtn 0.54 41.0 3.41e-01 80.0% 61.6%
4621658 241.4.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 0.53 45.0 3.66e-01 96.0% 86.2%
3186776 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 41.0 2.67e-01 85.3% 87.2%
3843500 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 2.84e-01 100.0% 82.6%
3479354 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 36.0 3.52e-01 77.3% 81.2%
D2 high residues 97-164
PDB