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NC_005260.1__NP_944010.1__Aeh1p132__00132

Bact-Vir

NC_005260.1__NP_944010.1__Aeh1p132__00132

Identity

Accession:
NC_005260 ↗
Kingdom:
phage

Quality

65.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-97
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wb6A00 3.90.1150.90 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.69 52.0 4.35e-01 82.8% 58.8%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.65 42.0 4.19e-01 70.3% 63.6%
3h5aD01 3.90.930.70 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.63 45.0 4.14e-01 78.1% 81.8%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.63 53.0 4.62e-01 100.0% 83.8%
3noyB02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.62 48.0 4.32e-01 89.1% 82.1%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.62 48.0 3.48e-01 84.4% 64.7%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.61 35.0 4.15e-01 82.8% 92.3%
1p9oA00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.61 49.0 3.25e-01 90.6% 82.5%
5i92F01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 47.0 3.54e-01 89.1% 58.0%
1k0eB00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.60 41.0 2.53e-01 71.9% 15.2%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 46.0 3.48e-01 85.9% 50.3%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 46.0 4.22e-01 85.9% 69.8%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 39.0 3.36e-01 76.6% 43.4%
7bgsA01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.58 50.0 4.18e-01 100.0% 99.2%
1w78A01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.58 44.0 2.92e-01 82.8% 25.5%
3oc4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 3.17e-01 70.3% 100.0%
3l44A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 47.0 3.53e-01 95.3% 55.2%
1i3oF00 1.10.1170.10 Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 0.57 40.0 3.69e-01 95.3% 52.7%
2hg7A00 3.30.56.60 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › XkdW-like 0.57 33.0 3.40e-01 84.4% 60.0%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.57 47.0 4.15e-01 96.9% 99.0%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 44.0 3.37e-01 89.1% 72.5%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.37e-01 84.4% 75.7%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 46.0 3.91e-01 96.9% 64.6%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 38.0 3.66e-01 73.4% 62.2%
2joiA00 3.30.310.190 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 41.0 3.76e-01 87.5% 79.2%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.54 43.0 3.95e-01 92.2% 90.1%
2jugA01 1.10.10.1830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain 0.54 33.0 3.53e-01 81.2% 70.9%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 40.0 3.85e-01 81.2% 90.8%
4arnA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.53 45.0 3.02e-01 98.4% 28.9%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 34.0 3.18e-01 96.9% 50.6%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 43.0 3.58e-01 96.9% 86.5%
2x49A01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.53 43.0 3.87e-01 96.9% 81.2%
1iv8A02 3.30.1590.10 Alpha Beta › 2-Layer Sandwich › Maltooligosyl trehalose synthase, domain 2 › Maltooligosyl trehalose synthase, domain 2 0.53 39.0 3.20e-01 78.1% 44.1%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.53 39.0 3.54e-01 82.8% 81.7%
7lgjA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 41.0 2.93e-01 95.3% 92.6%
1mkyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 38.0 2.99e-01 84.4% 87.5%
1ni5A02 1.20.59.20 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › 0.51 39.0 3.61e-01 87.5% 96.5%
2o30A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 34.0 3.17e-01 70.3% 56.1%
3qwuA01 3.10.450.740 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 30.0 3.38e-01 78.1% 80.9%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.50 43.0 3.33e-01 100.0% 96.6%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941038 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 45.0 4.97e-01 85.9% 88.0%
5008297 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.67 48.0 4.29e-01 75.0% 70.0%
5067762 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.67 51.0 3.78e-01 81.2% 47.5%
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.67 48.0 4.18e-01 84.4% 49.0%
3931934 330.9.1.0 a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p 0.65 48.0 4.81e-01 79.7% 86.2%
4675977 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.65 47.0 4.50e-01 76.6% 84.0%
3938283 386.1.1.251 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 0.65 40.0 3.83e-01 70.3% 53.3%
3365178 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.64 51.0 5.16e-01 100.0% 89.2%
223484 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.63 53.0 4.62e-01 100.0% 83.8%
3586847 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.63 47.0 4.37e-01 96.9% 63.7%
4443103 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.62 52.0 4.45e-01 95.3% 73.6%
3227136 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 45.0 3.19e-01 84.4% 24.3%
3212404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 45.0 3.07e-01 79.7% 20.8%
3289942 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 41.0 3.86e-01 71.9% 88.2%
4251998 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.61 52.0 4.59e-01 96.9% 84.2%
4058896 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.61 50.0 4.36e-01 95.3% 77.1%
4954769 2498.2.1.0 mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain 0.61 50.0 3.93e-01 96.9% 89.7%
3958912 296.1.1.0 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 0.61 50.0 4.42e-01 95.3% 81.0%
3512465 1.1.1.19 beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.61 43.0 3.53e-01 75.0% 97.5%
5035266 331.23.1.0 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.61 45.0 4.23e-01 82.8% 84.3%
4934918 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.60 46.0 4.52e-01 85.9% 80.0%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 44.0 3.00e-01 79.7% 20.8%
3992641 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.60 46.0 4.51e-01 84.4% 84.3%
4077601 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.60 49.0 4.27e-01 95.3% 77.9%
3235968 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.59 41.0 2.88e-01 73.4% 33.6%
4316823 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.59 50.0 4.17e-01 98.4% 68.6%
3438045 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.59 48.0 4.83e-01 100.0% 93.8%
3725907 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 46.0 4.59e-01 100.0% 88.4%
4056475 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.58 48.0 4.24e-01 96.9% 81.6%
3929201 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 35.0 3.86e-01 71.9% 77.6%
4665982 296.1.1.0 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 0.58 47.0 4.21e-01 95.3% 81.0%
4947563 3239.1.1.1 alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.58 49.0 3.16e-01 100.0% 49.6%
4614032 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.57 45.0 4.16e-01 89.1% 67.5%
4937815 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 38.0 3.62e-01 70.3% 93.8%
4928161 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.56 45.0 4.02e-01 93.8% 72.0%
4302852 331.22.1.2 a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.56 46.0 3.40e-01 95.3% 67.6%
3388895 220.1.1.170 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.55 41.0 3.49e-01 79.7% 60.9%
4981692 241.11.1.6 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › TfoX_N 0.55 45.0 4.01e-01 100.0% 96.2%
4929483 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.55 40.0 3.42e-01 95.3% 44.2%
5075957 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.55 41.0 2.81e-01 82.8% 37.2%
2516891 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.54 43.0 2.73e-01 87.5% 50.8%
4567535 1203.1.2.0 alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.54 37.0 2.45e-01 89.1% 16.1%
5078825 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.54 38.0 2.51e-01 73.4% 95.0%
3804709 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.54 42.0 2.76e-01 87.5% 97.4%
4964190 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 40.0 3.47e-01 85.9% 76.5%
3197429 244.2.1.10 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › NDH2_C 0.54 41.0 2.67e-01 84.4% 67.4%
3628286 223.2.1.33 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.54 38.0 3.07e-01 75.0% 73.8%
3515993 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.53 40.0 3.36e-01 84.4% 67.5%
3922598 4120.1.1.43 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › TSTD2_N 0.53 35.0 3.51e-01 79.7% 66.2%
4029444 2003.1.5.196 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr 0.53 42.0 2.58e-01 90.6% 41.6%
3385884 2003.1.15.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain › Maf_flag10_N 0.52 40.0 2.98e-01 85.9% 88.9%
3806737 5057.1.1.0 alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.52 42.0 3.31e-01 90.6% 71.4%
3233353 3794.1.1.3 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › ACCA_BT 0.52 43.0 3.47e-01 95.3% 89.6%
4940642 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 43.0 3.78e-01 100.0% 81.0%
3483955 386.1.1.6 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › ARS2 0.52 35.0 3.27e-01 79.7% 54.1%
3416069 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 39.0 3.85e-01 85.9% 77.1%
5001118 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.51 38.0 2.99e-01 84.4% 85.5%
4997639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.37e-01 84.4% 68.6%
4963899 2008.1.1.229 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7116 0.50 38.0 3.38e-01 89.1% 98.2%
2841859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 34.0 3.30e-01 71.9% 97.3%