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NC_005856.1__YP_006537.1__P1_gp069__00067

Bact-Vir

NC_005856.1__YP_006537.1__P1_gp069__00067

Identity

Accession:
NC_005856 ↗
Kingdom:
phage

Quality

76.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Punavirus› Escherichia_phage_P1

TaxID: 2886926

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-231_451-467
PDB
Domain cluster: rep: DNA_adenine_methyltransferase__YP_009325646__Only_Syngen_Nebraska_virus_5__1917232__D5-216
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00145.24 best DNA_methylase 74.9 1.20e-20 57.8% 35.5%
PF00145.24 DNA_methylase 24.0 3.60e-05 20.1% 8.3%
D2 medium residues 478-539_637-754
PDB
Domain cluster: rep: S2_009_000_R2_scaffold_143_prodigal-single.1__X__X__00197__D14-58_169-280
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02086.22 best MethyltransfD12 55.2 1.20e-14 54.4% 32.9%
PF02086.22 MethyltransfD12 44.3 2.70e-11 28.9% 20.8%
CATH (68)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2g1pB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.97 77.0 8.57e-01 95.6% 99.3%
2dpmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.91 76.0 8.20e-01 96.1% 98.7%
1q0sA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.89 71.0 7.91e-01 95.0% 100.0%
2as0A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 67.0 6.25e-01 97.8% 96.3%
3v97A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 63.0 6.55e-01 92.8% 96.4%
4krgA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 64.0 5.71e-01 93.3% 85.1%
2oo3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 64.0 5.49e-01 92.2% 86.5%
4dmgA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 65.0 6.20e-01 96.7% 96.2%
3tm4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 65.0 6.63e-01 96.1% 97.7%
4bluB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 64.0 5.43e-01 93.3% 86.2%
3dmgA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 60.0 6.14e-01 96.7% 90.4%
3v97B04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 66.0 6.31e-01 97.8% 95.0%
2pjdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 64.0 6.50e-01 96.7% 97.2%
4pwyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 65.0 5.78e-01 98.3% 90.0%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 66.0 6.40e-01 98.3% 91.2%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 64.0 6.37e-01 96.1% 100.0%
3k0bA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 64.0 6.52e-01 96.7% 98.9%
2bzgA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 61.0 5.64e-01 92.8% 91.3%
2f8lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 62.0 5.55e-01 92.8% 83.0%
3g2mA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 60.0 6.27e-01 90.0% 99.4%
3ll7A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 60.0 5.90e-01 90.0% 85.3%
1y8cA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 62.0 6.13e-01 93.9% 97.3%
4dcmA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 62.0 6.22e-01 97.2% 92.4%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 59.0 6.20e-01 90.0% 98.2%
3lccA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 60.0 5.67e-01 92.8% 84.7%
5h02A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 61.0 6.15e-01 93.9% 99.4%
4mtlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 63.0 6.02e-01 98.3% 90.9%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 53.0 5.65e-01 94.4% 92.9%
2yvlA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 62.0 6.13e-01 96.1% 98.4%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 63.0 5.69e-01 98.9% 84.9%
5c0oH00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 62.0 5.84e-01 96.7% 90.0%
5ccbA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 63.0 5.95e-01 98.3% 98.1%
3d2lC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 60.0 6.08e-01 93.9% 94.9%
6fdfA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 53.0 5.21e-01 81.7% 85.1%
4hh4C01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 60.0 5.81e-01 93.9% 89.8%
3egiA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 61.0 5.95e-01 95.6% 90.3%
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 58.0 6.01e-01 92.8% 98.2%
1yb2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 53.0 4.90e-01 85.0% 73.9%
4hg2B01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 55.0 5.69e-01 92.2% 97.0%
2m71A00 3.30.110.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain 0.64 32.0 4.28e-01 81.7% 87.8%
3mtiB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 59.0 5.91e-01 97.8% 98.9%
3ngxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 42.0 4.88e-01 92.2% 96.8%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 57.0 5.73e-01 97.8% 97.8%
7vkkB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 55.0 5.08e-01 95.0% 83.5%
1ni4A00 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.62 54.0 4.32e-01 95.0% 69.6%
2c7rA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 55.0 5.25e-01 97.2% 81.5%
2zigA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 45.0 4.11e-01 77.2% 97.5%
2o3jB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 47.0 4.51e-01 82.8% 89.5%
3u4qA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 45.0 4.01e-01 79.4% 78.0%
3dfuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 37.0 4.30e-01 99.4% 88.4%
3onmA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 27.0 3.59e-01 91.7% 80.2%
3dciA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.58 46.0 4.40e-01 82.2% 100.0%
7br2D01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.58 47.0 4.39e-01 83.9% 97.2%
2zpaA03 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 37.0 3.58e-01 99.4% 55.9%
2fiaB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 38.0 4.05e-01 92.2% 76.1%
3ngqA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 49.0 4.04e-01 97.8% 86.6%
5ewtA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 50.0 4.54e-01 100.0% 89.5%
1t90A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 49.0 4.26e-01 100.0% 76.4%
2ehdA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 50.0 4.80e-01 100.0% 95.7%
2ob0C01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 38.0 3.99e-01 91.7% 80.2%
3fncB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 36.0 3.78e-01 92.2% 75.2%
4kvxA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 37.0 3.99e-01 91.7% 83.6%
1g0hA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.52 30.0 3.63e-01 82.8% 87.0%
1ps9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 39.0 4.36e-01 98.3% 97.2%
2y51A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 47.0 3.98e-01 100.0% 74.7%
4dyvA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 47.0 4.44e-01 100.0% 93.0%
2fgyA03 3.30.1330.140 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Carboxysome Shell Carbonic Anhydrase, C-terminal domain 0.51 33.0 3.95e-01 98.9% 99.1%
3rkrA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 46.0 4.33e-01 100.0% 92.3%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4988477 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.92 85.0 7.11e-01 95.6% 97.5%
4006858 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.91 84.0 7.05e-01 93.9% 96.7%
5025561 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.91 83.0 7.01e-01 92.8% 99.3%
4482107 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.89 82.0 6.73e-01 95.0% 99.7%
4949366 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.89 82.0 6.68e-01 95.0% 99.7%
4392983 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.88 82.0 6.78e-01 95.0% 95.8%
4241513 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.88 83.0 6.79e-01 97.2% 96.3%
4585065 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.87 78.0 5.18e-01 93.3% 44.4%
4200568 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.84 78.0 6.57e-01 95.6% 98.9%
4950762 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.84 80.0 6.80e-01 98.3% 99.3%
9374 2003.1.5.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 0.80 74.0 6.35e-01 95.0% 100.0%
4988478 2003.1.5.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.78 73.0 6.03e-01 98.3% 81.3%
3604635 2003.1.5.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.77 70.0 5.59e-01 97.2% 93.9%
4936070 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.74 69.0 6.82e-01 97.8% 97.9%
4331589 2003.1.5.315 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020, Methyltransf_15, Methyltrans_SAM 0.74 68.0 4.67e-01 96.1% 39.8%
4999848 2003.1.5.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.74 68.0 6.04e-01 99.4% 100.0%
3386329 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.73 65.0 6.01e-01 94.4% 83.3%
4983373 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.73 67.0 6.29e-01 97.2% 87.9%
5046462 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.73 68.0 6.54e-01 98.3% 97.0%
4947924 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.73 68.0 6.76e-01 98.3% 100.0%
5034726 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.73 67.0 6.45e-01 97.2% 98.5%
None — 0.73 67.0 5.45e-01 97.8% 65.4%
4955464 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.73 67.0 6.71e-01 97.2% 100.0%
None — 0.73 67.0 6.45e-01 97.2% 95.0%
4528832 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.73 64.0 6.20e-01 93.3% 91.0%
3838571 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.72 65.0 5.95e-01 95.0% 82.2%
3615134 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.72 67.0 5.66e-01 98.9% 78.5%
4991373 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.72 65.0 6.01e-01 97.2% 83.0%
4639416 2003.1.5.74 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM 0.71 66.0 5.24e-01 97.8% 85.3%
None — 0.71 66.0 5.28e-01 98.3% 86.9%
4445114 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.71 65.0 6.56e-01 96.7% 96.7%
4928724 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.71 62.0 6.43e-01 92.8% 100.0%
3429092 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.71 65.0 5.81e-01 97.8% 85.7%
None — 0.71 61.0 4.96e-01 90.0% 64.4%
4207315 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.71 64.0 5.90e-01 96.7% 83.0%
4422896 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.71 65.0 6.44e-01 97.8% 95.3%
3987620 2003.1.5.22 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase 0.71 62.0 5.00e-01 92.2% 64.0%
5026309 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.70 63.0 6.45e-01 95.6% 99.4%
3945625 2003.1.5.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS 0.70 61.0 6.16e-01 92.2% 91.1%
3252092 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.70 62.0 5.87e-01 93.9% 87.6%
4977257 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.70 61.0 5.42e-01 92.8% 95.6%
3504902 2003.1.5.98 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6-adenineMlase 0.69 63.0 5.28e-01 95.0% 67.7%
3696768 2003.1.5.113 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF3419 0.69 61.0 4.98e-01 93.3% 94.1%
4004032 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.69 60.0 6.17e-01 93.9% 95.4%
5028665 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.69 61.0 5.67e-01 92.8% 98.2%
4986411 2003.1.5.179 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF30636 0.69 64.0 6.21e-01 98.9% 93.9%
3737372 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.69 54.0 4.39e-01 82.2% 50.6%
4948059 2003.1.5.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.68 62.0 5.36e-01 96.7% 67.8%
3257389 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.68 62.0 5.50e-01 97.8% 88.6%
5031729 2003.1.5.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.68 47.0 4.04e-01 70.6% 46.4%
None — 0.68 63.0 6.04e-01 98.3% 98.5%
3276341 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.68 54.0 4.24e-01 82.8% 48.2%
4186244 2003.1.5.25 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.68 63.0 5.71e-01 98.9% 82.1%
5040878 2003.1.5.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.68 61.0 5.37e-01 96.7% 68.1%
4981262 2003.1.5.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.67 62.0 5.50e-01 97.2% 73.9%
3693810 2003.1.5.176 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › BMT5-like 0.67 55.0 5.01e-01 86.7% 96.7%
4272029 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.67 60.0 4.97e-01 96.7% 61.3%
None — 0.67 61.0 4.97e-01 96.7% 62.9%
5068708 2003.1.5.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 0.65 59.0 5.96e-01 96.7% 98.4%
4974381 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 60.0 5.39e-01 98.3% 94.6%
4477761 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 58.0 4.55e-01 96.1% 62.4%
3507294 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.65 47.0 5.34e-01 81.1% 98.5%
5071190 2003.1.1.50 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF364 0.64 51.0 5.49e-01 87.2% 97.4%
3918690 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.62 55.0 4.33e-01 100.0% 47.7%
5020060 2003.1.1.50 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DUF364 0.62 50.0 5.26e-01 86.7% 93.8%
4503816 328.3.1.1 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain › IF3_C 0.62 32.0 4.26e-01 81.1% 92.6%
3277967 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.62 35.0 4.29e-01 78.9% 88.2%
3437851 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.61 54.0 5.25e-01 100.0% 85.1%
3804871 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.61 54.0 4.18e-01 99.4% 45.0%
4026343 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.61 33.0 4.39e-01 90.6% 100.0%
3620163 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.61 55.0 4.39e-01 100.0% 50.3%
4966170 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.59 56.0 4.23e-01 100.0% 51.0%
5048339 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 43.0 3.99e-01 73.9% 92.0%
3786875 2003.1.5.84 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DRE2_N 0.59 48.0 5.13e-01 100.0% 99.4%
5020839 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.58 35.0 3.99e-01 91.7% 79.3%
3960308 2003.1.1.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 44.0 3.94e-01 80.0% 78.4%
4126816 7577.1.1.1 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 0.57 50.0 3.38e-01 97.8% 94.0%
4950064 327.16.1.22 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF27275 0.56 20.0 3.05e-01 83.9% 77.1%
3781872 213.1.1.53 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_6 0.56 41.0 3.28e-01 75.6% 95.4%
3274854 213.1.1.27 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 0.55 38.0 3.80e-01 93.3% 67.9%
3165958 2003.1.5.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase 0.55 47.0 3.69e-01 92.2% 80.3%
3960228 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.54 34.0 4.14e-01 78.3% 98.2%
3559665 213.1.1.6 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.54 35.0 3.99e-01 78.3% 88.5%
4424691 246.3.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.52 46.0 4.04e-01 98.9% 88.6%
4025295 2501.1.1.1 ↗ a/b three-layered sandwiches › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › PTH2 0.51 29.0 3.40e-01 92.2% 76.7%
3343894 2007.6.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI 0.51 43.0 4.17e-01 87.2% 87.2%
3203231 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.51 36.0 3.61e-01 93.3% 67.9%
3514938 213.1.1.6 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.50 32.0 3.81e-01 81.1% 95.0%
D3 medium residues 540-636
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00363__D253-326
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02086.22 best MethyltransfD12 68.3 1.30e-18 99.0% 38.8%