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NC_005857.1__YP_006592.1__phiKO2p12__00012

Bact-Vir

NC_005857.1__YP_006592.1__phiKO2p12__00012

Identity

Accession:
NC_005857 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_phiKO2

TaxID: 255431

Cluster

View cluster (241 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-147
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF16463.12 best Phage_TTP_13 222.8 1.40e-66 100.0% 94.2%
PF08813.18 Phage_tail_3 24.2 3.20e-05 86.2% 46.1%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 49.0 4.72e-01 100.0% 63.9%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.69 50.0 5.11e-01 99.2% 77.4%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.69 64.0 5.90e-01 100.0% 88.9%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.66 61.0 5.67e-01 100.0% 83.7%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 57.0 5.61e-01 99.2% 92.7%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.63 56.0 5.25e-01 95.4% 84.0%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 48.0 4.68e-01 100.0% 76.2%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.60 52.0 4.10e-01 91.5% 65.9%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.59 53.0 5.06e-01 96.2% 98.6%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 4.88e-01 100.0% 81.6%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.59 39.0 2.94e-01 87.7% 28.2%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 45.0 4.49e-01 100.0% 86.1%
2ypyA00 3.30.70.390 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain 0.53 34.0 3.38e-01 96.9% 60.4%
2yq1C00 3.30.70.390 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain 0.51 34.0 3.48e-01 96.9% 67.2%
1s9iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 29.0 3.32e-01 86.2% 76.3%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.50 46.0 3.91e-01 100.0% 90.5%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.85 71.0 5.42e-01 98.5% 41.9%
4157825 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 77.0 7.71e-01 100.0% 96.2%
5082881 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 73.0 7.44e-01 98.5% 99.2%
2471637 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.80 75.0 7.12e-01 100.0% 91.3%
2642579 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.79 70.0 7.07e-01 100.0% 94.6%
2674670 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.79 74.0 6.67e-01 100.0% 75.6%
2471641 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.79 74.0 7.04e-01 100.0% 86.6%
5003885 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.79 74.0 7.15e-01 100.0% 89.7%
3976188 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.78 73.0 6.65e-01 100.0% 78.2%
2101633 1.1.13.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube 0.78 71.0 6.46e-01 100.0% 75.4%
4995819 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 73.0 6.90e-01 100.0% 98.0%
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 69.0 6.97e-01 98.5% 95.4%
3942090 1.1.5.77 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube 0.77 72.0 6.55e-01 100.0% 78.2%
3581358 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 72.0 6.71e-01 99.2% 89.0%
5078836 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 61.0 6.59e-01 100.0% 97.3%
2101663 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.76 70.0 6.44e-01 97.7% 87.1%
2832216 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.76 70.0 6.61e-01 100.0% 92.8%
4988100 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 66.0 6.79e-01 100.0% 100.0%
2832217 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.75 70.0 6.77e-01 100.0% 92.3%
3023894 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.75 68.0 6.52e-01 98.5% 91.3%
4344991 1.1.5.35 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.74 54.0 5.42e-01 97.7% 75.4%
3096576 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 67.0 6.28e-01 99.2% 86.2%
3587074 1.1.13.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N 0.72 57.0 6.18e-01 98.5% 98.2%
4379249 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.71 50.0 5.15e-01 99.2% 75.2%
4929587 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 48.0 5.65e-01 94.6% 100.0%
4981269 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 40.0 4.67e-01 88.5% 76.8%
3966280 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 47.0 5.37e-01 96.2% 92.6%
3943282 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 50.0 5.25e-01 99.2% 80.0%
5083300 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.70 65.0 6.27e-01 100.0% 94.5%
3942828 1.1.13.39 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 0.70 64.0 6.16e-01 100.0% 93.1%
3991601 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 47.0 4.42e-01 94.6% 56.6%
136185 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.69 64.0 5.90e-01 100.0% 88.9%
3969384 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.68 63.0 5.86e-01 100.0% 84.4%
4878666 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.68 60.0 5.92e-01 100.0% 89.1%
4960006 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.68 50.0 5.43e-01 100.0% 91.7%
4954561 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 62.0 6.14e-01 98.5% 99.3%
3977123 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.68 62.0 5.81e-01 100.0% 81.9%
3265120 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 62.0 5.54e-01 100.0% 81.7%
3264744 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.65 61.0 5.45e-01 100.0% 81.7%
4034209 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.65 58.0 5.74e-01 96.2% 99.3%
5049720 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 53.0 5.38e-01 100.0% 86.2%
5047765 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 52.0 5.39e-01 100.0% 88.8%
4033579 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.64 57.0 5.79e-01 95.4% 100.0%
5040464 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 41.0 4.66e-01 89.2% 86.3%
5038472 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 43.0 4.66e-01 88.5% 80.9%
3980535 1.1.13.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.64 57.0 5.68e-01 97.7% 97.0%
3164699 1.1.13.33 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.64 51.0 5.37e-01 96.9% 98.3%
4032562 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.63 56.0 5.66e-01 96.2% 97.7%
184718 1.1.13.16 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 0.63 56.0 5.25e-01 95.4% 84.0%
184986 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.62 54.0 5.51e-01 97.7% 98.4%
4888732 1.1.13.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.61 54.0 5.14e-01 100.0% 82.7%
5004559 1.1.13.75 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.60 52.0 5.18e-01 95.4% 100.0%
3602499 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.59 49.0 4.98e-01 100.0% 89.2%
4953386 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.59 51.0 4.98e-01 100.0% 85.7%
4118093 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.58 51.0 4.78e-01 100.0% 78.7%
5067070 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.57 51.0 5.02e-01 100.0% 90.0%
3183073 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.56 52.0 4.03e-01 100.0% 57.8%
4992907 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.56 50.0 4.67e-01 100.0% 80.0%
5053266 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 50.0 4.65e-01 100.0% 88.1%
4988254 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 48.0 4.33e-01 100.0% 70.0%
5027270 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 50.0 4.50e-01 100.0% 75.4%
4968263 1.1.5.91 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C 0.54 49.0 4.10e-01 100.0% 63.6%
3369437 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.53 46.0 3.70e-01 95.4% 75.6%
3639554 1.1.5.9 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.50 46.0 3.90e-01 100.0% 63.0%