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NC_005857.1__YP_006606.1__phiKO2p26__00026

Bact-Vir

NC_005857.1__YP_006606.1__phiKO2p26__00026

Identity

Accession:
NC_005857 ↗
Kingdom:
phage

Quality

83.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_phiKO2

TaxID: 255431

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 446-533
PDB
Domain cluster: rep: CP025712.1__AUO37530.1__YDC107_5413__00053__D257-336
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20818.3 best TelK_stirrup 146.0 4.10e-43 100.0% 94.6%
D2 high residues 595-637
PDB
Domain cluster: rep: IMGVR_UViG_3300025770_000022-3300025770-Ga0209362_100018330__D15-61
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.75 55.0 3.99e-01 81.4% 37.9%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.74 52.0 3.97e-01 74.4% 32.7%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 53.0 3.29e-01 88.4% 12.9%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 53.0 4.12e-01 100.0% 34.6%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.72 56.0 4.09e-01 86.0% 38.5%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.71 47.0 3.39e-01 72.1% 23.2%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.71 62.0 5.67e-01 100.0% 81.0%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.70 58.0 4.69e-01 100.0% 48.4%
4pifA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.70 56.0 3.95e-01 90.7% 72.7%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.70 56.0 5.22e-01 100.0% 72.2%
2ywqA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.70 58.0 4.75e-01 100.0% 55.7%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 57.0 5.04e-01 100.0% 67.6%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 55.0 4.91e-01 100.0% 63.4%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 56.0 4.21e-01 100.0% 80.3%
3zleA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.69 48.0 4.93e-01 74.4% 82.1%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 56.0 4.48e-01 100.0% 46.4%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 55.0 4.92e-01 100.0% 63.8%
2y8tA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.68 48.0 4.51e-01 76.7% 60.0%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.68 51.0 3.62e-01 83.7% 72.4%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.53e-01 86.0% 59.6%
2rqlA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.67 55.0 4.48e-01 100.0% 53.7%
1bf3A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 50.0 3.13e-01 83.7% 28.7%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 48.0 3.55e-01 79.1% 35.5%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 55.0 5.49e-01 100.0% 93.3%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 53.0 4.72e-01 100.0% 62.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 54.0 4.75e-01 100.0% 63.4%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 55.0 3.87e-01 100.0% 36.2%
2xgtB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 55.0 4.30e-01 100.0% 50.5%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.66 53.0 4.02e-01 100.0% 45.6%
1xfdA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.66 52.0 3.00e-01 100.0% 8.4%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 54.0 4.20e-01 100.0% 47.2%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 54.0 4.27e-01 100.0% 61.0%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.65 54.0 4.18e-01 100.0% 49.5%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 54.0 3.93e-01 100.0% 42.2%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 44.0 3.45e-01 72.1% 45.5%
5x6vG00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.65 54.0 3.94e-01 97.7% 35.6%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.64 51.0 4.03e-01 100.0% 47.7%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 43.0 4.05e-01 72.1% 57.1%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 52.0 3.40e-01 97.7% 36.6%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.64 46.0 3.43e-01 79.1% 60.2%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 51.0 4.12e-01 97.7% 45.1%
4jj0B00 2.30.42.60 Mainly Beta › Roll › Pdz3 Domain › 0.63 45.0 3.05e-01 79.1% 30.0%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 51.0 3.70e-01 100.0% 39.7%
2jtdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 3.53e-01 88.4% 58.2%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 48.0 3.51e-01 88.4% 50.4%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 54.0 3.84e-01 100.0% 44.4%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 54.0 3.79e-01 100.0% 48.9%
1k8kC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 50.0 2.99e-01 100.0% 18.1%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 50.0 4.05e-01 97.7% 78.9%
1tpmA00 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.61 42.0 4.05e-01 72.1% 62.0%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.60 45.0 3.24e-01 95.3% 26.5%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 47.0 3.45e-01 88.4% 35.0%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 49.0 4.18e-01 100.0% 56.2%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 42.0 3.34e-01 79.1% 43.5%
1okjB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 49.0 3.63e-01 100.0% 36.2%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 47.0 3.88e-01 90.7% 57.5%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 50.0 3.55e-01 97.7% 42.0%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 48.0 2.79e-01 100.0% 9.9%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.59 51.0 3.49e-01 100.0% 36.6%
1e8oA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.59 45.0 3.92e-01 88.4% 54.1%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.17e-01 97.7% 32.1%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.59 52.0 3.61e-01 97.7% 35.1%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 44.0 3.73e-01 88.4% 79.7%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.57 40.0 3.63e-01 88.4% 52.2%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.57 46.0 3.46e-01 95.3% 45.1%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 48.0 3.37e-01 100.0% 34.5%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.29e-01 97.7% 58.9%
2qu8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 3.09e-01 100.0% 74.2%
3e8vA00 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.55 46.0 3.81e-01 100.0% 73.2%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.55 40.0 2.99e-01 95.3% 82.1%
1je0C00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.54 46.0 2.94e-01 100.0% 83.7%
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 45.0 3.68e-01 100.0% 81.8%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.54 47.0 3.22e-01 100.0% 49.0%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 3.68e-01 100.0% 78.6%
3zssA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 46.0 3.66e-01 100.0% 94.4%
6j5tB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.22e-01 100.0% 67.5%
1z2aA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 41.0 2.88e-01 93.0% 84.1%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4485741 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.82 56.0 3.04e-01 74.4% 4.5%
4533094 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.77 56.0 3.95e-01 79.1% 34.6%
3479701 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.77 55.0 4.08e-01 79.1% 39.1%
4018795 220.1.1.43 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.76 56.0 4.02e-01 79.1% 36.3%
3585833 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.75 60.0 4.60e-01 100.0% 37.3%
3709800 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.75 58.0 4.62e-01 100.0% 41.1%
3925367 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 56.0 3.83e-01 81.4% 28.7%
3792405 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.74 53.0 3.00e-01 79.1% 8.9%
3515433 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.74 59.0 5.29e-01 100.0% 63.1%
3558744 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 52.0 3.81e-01 79.1% 36.0%
3796100 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.73 52.0 3.62e-01 79.1% 30.0%
3228776 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.73 53.0 3.17e-01 79.1% 14.2%
3885625 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.72 52.0 3.57e-01 79.1% 40.0%
4336488 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.72 60.0 5.18e-01 100.0% 58.6%
3403381 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 59.0 4.65e-01 100.0% 43.0%
3847592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 53.0 3.03e-01 81.4% 8.3%
3166028 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 56.0 4.49e-01 100.0% 42.1%
3919311 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.71 51.0 3.73e-01 79.1% 36.0%
4393617 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.71 61.0 4.42e-01 100.0% 36.2%
5004264 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.71 61.0 4.49e-01 100.0% 38.2%
3911301 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.71 58.0 4.81e-01 100.0% 51.8%
4973804 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 52.0 4.38e-01 79.1% 52.0%
5074419 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.71 57.0 5.11e-01 100.0% 63.1%
3791314 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.71 52.0 3.67e-01 79.1% 32.6%
3923613 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.71 52.0 3.55e-01 79.1% 27.3%
5032371 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.71 58.0 5.03e-01 95.3% 64.3%
3853196 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.70 51.0 3.59e-01 79.1% 33.6%
3797651 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 57.0 4.69e-01 100.0% 51.1%
3582821 220.1.1.5 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.70 50.0 4.06e-01 79.1% 50.0%
3623534 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 51.0 4.06e-01 79.1% 48.9%
5046650 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.70 60.0 4.24e-01 100.0% 36.3%
3479661 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 52.0 4.12e-01 100.0% 36.4%
4932452 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 59.0 4.64e-01 100.0% 60.0%
3549045 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 54.0 4.20e-01 100.0% 37.3%
4932495 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.69 59.0 4.15e-01 100.0% 35.7%
3514659 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 55.0 4.41e-01 100.0% 46.0%
3993443 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 58.0 4.90e-01 100.0% 57.3%
3926989 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 55.0 3.21e-01 100.0% 11.0%
3933098 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.68 54.0 4.87e-01 100.0% 63.1%
5023128 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 57.0 4.22e-01 100.0% 41.7%
3644081 2004.1.1.26 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin 0.68 50.0 3.42e-01 79.1% 44.0%
3216768 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.68 56.0 4.33e-01 100.0% 40.0%
4225322 4263.2.1.1 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext 0.68 49.0 4.31e-01 79.1% 63.1%
3519033 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 56.0 4.63e-01 100.0% 52.9%
3514664 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 52.0 4.48e-01 100.0% 51.2%
3471801 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 48.0 3.45e-01 79.1% 36.3%
3918879 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 47.0 3.36e-01 79.1% 29.3%
4255386 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.67 55.0 4.36e-01 100.0% 50.0%
4995609 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 55.0 3.93e-01 100.0% 37.2%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 50.0 4.30e-01 88.4% 50.0%
3944566 809.1.1.10 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › EndoU_bacteria 0.66 51.0 4.61e-01 100.0% 60.0%
3951541 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 55.0 4.18e-01 100.0% 46.4%
5044036 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 54.0 3.91e-01 100.0% 37.0%
4946434 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.66 55.0 3.98e-01 100.0% 38.5%
3392130 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.65 49.0 4.37e-01 83.7% 60.0%
4959991 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 54.0 4.75e-01 100.0% 88.6%
146717 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 51.0 4.20e-01 100.0% 44.9%
3934401 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 55.0 4.13e-01 97.7% 76.4%
5052436 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.65 52.0 4.30e-01 90.7% 62.5%
3495619 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.65 46.0 3.54e-01 79.1% 38.2%
4947047 2.1.1.357 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA-synt_2 0.65 53.0 4.34e-01 100.0% 57.8%
3446884 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 50.0 4.35e-01 88.4% 65.7%
3879653 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.64 48.0 4.22e-01 88.4% 52.9%
5057701 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 52.0 3.80e-01 100.0% 37.0%
4939419 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.64 54.0 4.44e-01 100.0% 76.5%
5038503 331.3.1.5 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.64 55.0 3.92e-01 100.0% 36.3%
4932470 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 52.0 4.26e-01 100.0% 57.8%
5001238 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 53.0 4.03e-01 100.0% 65.5%
3218188 2485.1.1.0 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.63 50.0 3.80e-01 100.0% 82.4%
3571806 3338.2.1.0 ↗ a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB 0.63 53.0 4.13e-01 100.0% 59.0%
3633647 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.62 47.0 4.21e-01 88.4% 56.9%
3704298 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.62 54.0 4.01e-01 100.0% 79.1%
3865082 9.13.1.0 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.62 52.0 4.19e-01 100.0% 67.8%
3882163 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 50.0 3.22e-01 100.0% 23.9%
3523669 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.61 51.0 4.12e-01 100.0% 67.8%
4614038 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 52.0 3.73e-01 100.0% 45.1%
4011254 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 44.0 2.66e-01 79.1% 12.3%
3470360 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 48.0 3.49e-01 93.0% 54.8%
4003459 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.60 53.0 3.32e-01 100.0% 60.0%
4941490 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.60 43.0 3.06e-01 79.1% 36.3%
3271779 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 45.0 3.27e-01 100.0% 26.9%
3690077 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 43.0 2.69e-01 79.1% 14.3%
3331262 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.59 47.0 3.84e-01 97.7% 86.3%
3902875 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 47.0 4.21e-01 95.3% 66.2%
3648910 331.4.1.2 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.58 48.0 3.85e-01 100.0% 45.6%
3555102 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 45.0 3.45e-01 93.0% 35.8%
3250484 246.3.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.58 51.0 3.19e-01 100.0% 64.9%
3450097 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.57 48.0 3.60e-01 100.0% 64.7%
3239304 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.57 45.0 3.01e-01 95.3% 32.2%
4027686 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.56 40.0 3.84e-01 83.7% 87.3%
4950404 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.55 45.0 3.88e-01 100.0% 58.7%
4994932 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 45.0 2.95e-01 100.0% 38.0%
D3 medium residues 6-76
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22853.2 best TelK_N 141.9 8.60e-42 100.0% 94.7%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v6eA01 1.10.287.3180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.98 88.0 8.58e-01 100.0% 88.0%
3p01A01 6.10.140.590 Special › Helix non-globular › Helix Hairpins › 0.87 59.0 5.58e-01 100.0% 60.2%
4i43B02 3.30.43.40 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain 0.85 61.0 5.10e-01 100.0% 46.5%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.78 52.0 4.68e-01 81.7% 50.5%
1zoyD00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.78 53.0 4.66e-01 76.1% 49.0%
2fcwA00 1.20.81.10 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain 0.72 51.0 4.37e-01 73.2% 74.5%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 66.0 5.62e-01 100.0% 79.8%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.68 61.0 5.24e-01 100.0% 82.1%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.68 50.0 5.19e-01 77.5% 84.6%
4v3iA00 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.67 52.0 4.08e-01 97.2% 39.2%
4j0eA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 49.0 3.51e-01 93.0% 27.2%
4a64A01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.67 60.0 4.88e-01 100.0% 54.5%
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.67 46.0 4.03e-01 74.6% 47.7%
4g3vA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.66 60.0 4.54e-01 100.0% 91.4%
3sllA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.65 47.0 5.01e-01 90.1% 90.2%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 51.0 3.98e-01 87.3% 79.7%
2pusA04 6.10.140.300 Special › Helix non-globular › Helix Hairpins › 0.64 45.0 3.89e-01 97.2% 48.1%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.64 57.0 4.91e-01 100.0% 80.2%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.64 50.0 4.32e-01 97.2% 53.4%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.63 46.0 3.74e-01 76.1% 64.3%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.63 43.0 3.45e-01 71.8% 57.9%
3rlfF01 1.20.58.370 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like 0.63 44.0 4.20e-01 74.6% 61.6%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.62 55.0 4.10e-01 100.0% 59.9%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 55.0 4.06e-01 100.0% 57.6%
4me9B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 51.0 3.80e-01 91.5% 51.6%
2v57A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 47.0 3.62e-01 100.0% 35.7%
1lj2A00 1.20.5.970 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein 0.59 45.0 3.99e-01 83.1% 55.7%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.59 47.0 4.47e-01 87.3% 91.8%
1xdpA01 1.20.58.310 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain 0.59 52.0 4.58e-01 100.0% 73.3%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.59 37.0 4.37e-01 90.1% 93.9%
2guzB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.58 36.0 3.79e-01 80.3% 69.2%
1vi0A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 49.0 3.94e-01 100.0% 47.6%
3urzA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 44.0 3.19e-01 84.5% 33.2%
3jrtA00 1.20.120.1060 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 48.0 3.76e-01 100.0% 77.1%
1zbtA01 6.10.140.1950 Special › Helix non-globular › Helix Hairpins › 0.55 40.0 3.82e-01 77.5% 85.5%
2b0hA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.55 48.0 3.97e-01 100.0% 80.5%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.53 46.0 3.95e-01 100.0% 78.6%
2p7vA00 1.20.120.1370 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 0.53 44.0 3.60e-01 98.6% 82.1%
4p9tA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 44.0 3.83e-01 98.6% 86.7%
1kt1A03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 39.0 3.12e-01 98.6% 36.7%
3b9oA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.51 44.0 2.79e-01 100.0% 25.6%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 43.0 3.74e-01 100.0% 60.7%
2np9A01 1.20.58.1300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 44.0 3.63e-01 100.0% 64.2%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3790478 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.90 58.0 3.68e-01 84.5% 16.2%
3184585 3826.1.1.0 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.87 57.0 5.81e-01 78.9% 68.6%
3591480 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.84 51.0 3.36e-01 83.1% 16.9%
3797030 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.82 59.0 4.02e-01 94.4% 24.1%
3230168 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.81 60.0 3.81e-01 77.5% 60.3%
3230196 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 63.0 5.23e-01 100.0% 49.2%
3242655 7023.1.1.0 ↗ alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein 0.79 61.0 5.21e-01 80.3% 90.5%
3378525 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.79 59.0 5.13e-01 78.9% 66.7%
3838401 192.10.1.0 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.79 57.0 5.03e-01 98.6% 54.0%
1144608 310.2.1.1 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.79 56.0 4.65e-01 77.5% 45.6%
3948115 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.78 53.0 3.12e-01 77.5% 9.4%
3491651 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.78 57.0 4.06e-01 77.5% 29.2%
3948171 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.77 63.0 5.33e-01 97.2% 55.5%
3242821 192.10.1.0 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.77 49.0 5.26e-01 84.5% 76.7%
3974805 2498.1.1.71 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Aminopep 0.73 65.0 4.11e-01 100.0% 20.9%
3252617 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 56.0 3.56e-01 100.0% 16.3%
3531403 3914.1.1.0 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.71 43.0 5.05e-01 76.1% 86.0%
3449084 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.70 49.0 4.24e-01 77.5% 48.6%
3357226 375.1.9.3 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Myb_CC_LHEQLE 0.70 48.0 4.56e-01 71.8% 61.2%
5010442 5060.2.1.0 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain 0.70 52.0 4.01e-01 80.3% 67.5%
3743177 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.69 49.0 3.83e-01 73.2% 42.8%
5075878 632.15.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.69 45.0 4.38e-01 78.9% 60.0%
3567180 4177.1.1.61 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PLC-beta_C 0.68 61.0 4.19e-01 100.0% 82.9%
4983459 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.67 42.0 2.60e-01 94.4% 11.0%
4944703 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.67 62.0 4.98e-01 100.0% 72.3%
3761838 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.66 48.0 4.14e-01 76.1% 70.4%
3994881 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 52.0 3.22e-01 100.0% 14.2%
1943640 604.9.1.1 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.65 52.0 4.63e-01 100.0% 59.8%
4312332 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.65 57.0 5.44e-01 100.0% 91.8%
3279711 191.1.1.26 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 0.63 55.0 4.26e-01 100.0% 45.3%
3407217 192.29.1.158 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Tmemb_185A 0.62 53.0 4.34e-01 98.6% 86.4%
3655689 633.24.1.2 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.61 55.0 4.75e-01 100.0% 83.6%
3686594 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.61 54.0 5.25e-01 98.6% 87.5%
3968489 3978.1.1.0 ↗ alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase 0.61 55.0 3.42e-01 98.6% 47.8%
3367685 192.15.1.80 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF2985 0.61 53.0 4.11e-01 94.4% 82.7%
4968943 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.59 52.0 4.91e-01 97.2% 87.1%
3800736 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 41.0 2.69e-01 71.8% 89.4%
3217251 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 48.0 3.62e-01 100.0% 34.7%
3962942 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.59 43.0 3.37e-01 77.5% 52.0%
3946793 101.1.1.259 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.58 40.0 3.46e-01 78.9% 45.2%
4953126 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.57 49.0 3.49e-01 98.6% 79.1%
5018787 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.57 51.0 3.87e-01 100.0% 43.0%
3427778 604.1.1.144 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26575 0.56 48.0 4.61e-01 95.8% 82.5%
3867821 7512.1.1.1 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.56 45.0 3.07e-01 91.5% 31.4%
3977377 101.1.2.836 ↗ alpha arrays › HTH › HTH › winged helix domain › Terminase_5 0.56 40.0 3.48e-01 78.9% 49.5%
5009878 3352.1.1.48 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DUF2079 0.56 48.0 3.03e-01 97.2% 30.5%
3614039 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.55 40.0 2.38e-01 76.1% 9.7%
3458681 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.55 47.0 3.29e-01 100.0% 57.2%
3927056 603.1.1.1 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin 0.54 46.0 3.40e-01 100.0% 64.3%
3818909 109.4.1.1185 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTB-POZ_ANK-like 0.54 42.0 2.96e-01 100.0% 23.3%
3600361 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.54 39.0 3.57e-01 77.5% 69.5%
3563618 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.53 41.0 3.58e-01 85.9% 80.0%
4156067 192.5.1.1 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.53 43.0 3.72e-01 88.7% 80.9%
4956253 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.52 42.0 3.69e-01 87.3% 71.4%
4166693 7013.1.1.1 ↗ alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.52 39.0 2.93e-01 80.3% 63.8%
3713201 4323.1.1.1 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.52 42.0 3.29e-01 85.9% 99.3%
4980072 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.44e-01 97.2% 61.4%
3227811 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.51 40.0 3.15e-01 85.9% 41.9%
3239510 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.50 41.0 3.75e-01 91.5% 80.0%
D4 medium residues 122-199
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20849.3 best TelK_muzzle 119.9 8.70e-35 98.7% 65.2%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v6eA02 1.20.1440.270 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.96 92.0 7.51e-01 100.0% 60.5%
3eslA01 1.20.58.2070 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 40.0 4.11e-01 93.6% 57.3%
2oocB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.70 59.0 5.41e-01 96.2% 85.7%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.69 60.0 4.84e-01 98.7% 86.0%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.67 41.0 3.76e-01 97.4% 47.5%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.63 39.0 3.95e-01 98.7% 63.2%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.62 40.0 4.32e-01 96.2% 78.1%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 37.0 3.82e-01 96.2% 62.2%
2f76X00 1.10.150.490 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein 0.61 41.0 3.80e-01 98.7% 54.0%
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 43.0 4.04e-01 98.7% 60.8%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.58 38.0 3.69e-01 93.6% 60.0%
3bvoA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.58 36.0 3.50e-01 94.9% 55.8%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.57 41.0 3.64e-01 100.0% 51.3%
3rkoG00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 43.0 3.98e-01 100.0% 64.0%
3nvoB02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.55 46.0 4.05e-01 100.0% 62.1%
2a3qA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.55 37.0 3.33e-01 93.6% 49.6%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.54 42.0 3.91e-01 100.0% 68.4%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 44.0 3.90e-01 91.0% 72.7%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.52 35.0 3.81e-01 100.0% 84.4%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.52 35.0 3.62e-01 92.3% 74.3%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 41.0 3.68e-01 96.2% 60.7%
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.51 40.0 4.08e-01 98.7% 85.5%
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.51 44.0 4.08e-01 100.0% 90.1%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 43.0 3.62e-01 96.2% 62.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
223792 3587.1.1.1 ↗ alpha arrays › Protelomerase muzzle domain › Protelomerase muzzle domain › Protelomerase muzzle domain › TelK_muzzle 0.96 91.0 7.67e-01 98.7% 65.3%
3988434 633.2.1.0 ↗ alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein 0.66 40.0 3.70e-01 94.9% 46.2%
3242442 109.4.1.1141 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF19 0.59 42.0 3.45e-01 76.9% 94.2%
3715000 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.58 40.0 3.74e-01 70.5% 92.6%
4986013 4994.1.1.0 ↗ alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like 0.55 36.0 3.52e-01 96.2% 60.0%
3222895 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.55 43.0 4.35e-01 100.0% 86.3%
4974685 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 43.0 4.29e-01 92.3% 83.1%
4140647 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.52 45.0 3.71e-01 100.0% 96.7%
5012567 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.50 44.0 3.60e-01 100.0% 94.0%
D5 medium residues 239-371
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16684.11 best ResT-TelK_cat 48.5 1.10e-12 90.2% 43.1%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.98 96.0 7.68e-01 100.0% 59.1%
4dwpA02 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.82 72.0 5.85e-01 100.0% 53.3%
5ljmA00 1.20.58.2190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 44.0 3.87e-01 93.2% 91.1%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
223793 101.1.8.6 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › ResT-TelK_cat 0.98 96.0 9.20e-01 100.0% 91.1%
4242808 101.1.8.6 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › ResT-TelK_cat 0.89 72.0 7.65e-01 100.0% 93.3%
4874139 186.1.1.27 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › ResT-TelK_cat 0.86 57.0 6.63e-01 96.2% 91.8%
1503831 101.1.8.6 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › ResT-TelK_cat 0.82 72.0 7.23e-01 100.0% 90.3%
3766764 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.54 38.0 2.99e-01 70.7% 49.1%
4507316 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.54 37.0 4.00e-01 71.4% 94.8%
3485547 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 38.0 3.48e-01 73.7% 92.9%
3601941 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.91e-01 79.7% 100.0%
3312716 220.1.1.172 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PRMT_N 0.52 36.0 4.02e-01 72.2% 99.0%
3381618 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 37.0 3.88e-01 75.9% 86.4%
3739683 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.51 38.0 4.10e-01 76.7% 98.2%
3813657 220.1.1.172 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PRMT_N 0.50 35.0 3.83e-01 72.2% 99.1%
D6 medium residues 372-438
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16684.11 best ResT-TelK_cat 29.8 5.80e-07 83.6% 26.5%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.99 87.0 5.71e-01 91.0% 27.1%
2jx4A01 6.10.140.460 Special › Helix non-globular › Helix Hairpins › 0.65 39.0 4.42e-01 76.1% 83.3%
6eztA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 39.0 2.47e-01 83.6% 11.5%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.79e-01 92.5% 94.0%
1ug2A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 37.0 4.03e-01 74.6% 88.5%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.37e-01 83.6% 91.4%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 4.44e-01 94.0% 87.1%
3t57A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.54 43.0 4.15e-01 86.6% 80.0%
6wshA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.76e-01 71.6% 85.5%
4hfkB00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 40.0 3.63e-01 89.6% 61.2%
2r7cA02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.51 39.0 3.04e-01 83.6% 70.7%
1umnG00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 44.0 3.32e-01 98.5% 49.1%
2js9A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.50 39.0 3.71e-01 88.1% 88.9%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
223794 101.1.8.6 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › ResT-TelK_cat 0.99 90.0 9.19e-01 94.0% 96.9%
5011451 304.123.1.0 ↗ a+b two layers › Alpha-beta plaits › PF0523-like › PF0523-like 0.64 48.0 4.02e-01 82.1% 56.7%
3689715 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.63 47.0 4.88e-01 88.1% 90.0%
4960058 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.62 41.0 4.33e-01 76.1% 76.7%
3692197 101.1.3.9 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.60 41.0 4.53e-01 74.6% 96.0%
4011519 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 44.0 4.65e-01 89.6% 91.7%
3388387 3110.1.1.2 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3-PglB_core 0.57 42.0 3.13e-01 80.6% 46.1%
3890462 101.1.1.112 ↗ alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.57 42.0 4.31e-01 82.1% 96.9%
4020803 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 3.57e-01 80.6% 73.6%
3202189 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.56 39.0 3.67e-01 83.6% 58.8%
3411002 101.1.2.178 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.55 41.0 3.79e-01 80.6% 70.0%
142817 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.55 46.0 4.54e-01 97.0% 88.9%
3847053 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.54 39.0 3.80e-01 77.6% 89.3%
5031977 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.52 35.0 3.34e-01 70.1% 77.6%
3399868 219.1.1.24 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N 0.52 41.0 2.84e-01 88.1% 76.7%
4974312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 35.0 3.90e-01 79.1% 98.0%
3219209 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.50 39.0 3.90e-01 91.0% 92.9%