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NC_006882.2__YP_214217.1__PSSP7_040__00044
Bact-VirNC_006882.2__YP_214217.1__PSSP7_040__00044
Identity
- Accession:
- NC_006882 ↗
- Kingdom:
- phage
Quality
96.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Tiamatvirus›
Prochlorococcus_phage_P-SSP7
TaxID: 2908095
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-92
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rfwA02 | 6.10.140.970 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 40.0 | 4.10e-01 | 90.9% | 61.4% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.56 | 27.0 | 2.56e-01 | 70.5% | 33.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743635 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.55 | 31.0 | 3.25e-01 | 98.9% | 60.0% |
| 3376682 | 5069.1.3.88 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PGG | 0.53 | 37.0 | 3.52e-01 | 95.5% | 61.0% |
| 3679360 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.52 | 41.0 | 3.97e-01 | 98.9% | 75.0% |
| 3386022 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.51 | 43.0 | 2.94e-01 | 93.2% | 48.1% |