←Back to structures
NC_006883.2__YP_214350.1__PSSM2_118__00117
Bact-VirNC_006883.2__YP_214350.1__PSSM2_118__00117
Identity
- Accession:
- NC_006883 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Salacisavirus›
Prochlorococcus_phage_P-SSM2
TaxID: 268746
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 248-321
Domain cluster:
rep: NC_048679.1__YP_009835506.1__HWB34_gp31__00031__D132-209
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 61.0 | 6.26e-01 | 100.0% | 94.4% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 63.0 | 5.95e-01 | 100.0% | 92.3% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 63.0 | 5.21e-01 | 100.0% | 67.9% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.70 | 61.0 | 5.64e-01 | 97.3% | 91.5% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 60.0 | 5.98e-01 | 98.6% | 96.0% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 60.0 | 5.90e-01 | 98.6% | 96.2% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 62.0 | 5.81e-01 | 100.0% | 92.2% |
| 4dk0A02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.68 | 61.0 | 5.74e-01 | 100.0% | 97.8% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.68 | 59.0 | 5.18e-01 | 95.9% | 81.7% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 60.0 | 5.63e-01 | 100.0% | 94.6% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.67 | 58.0 | 5.34e-01 | 97.3% | 93.8% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 54.0 | 5.02e-01 | 86.5% | 82.6% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 57.0 | 5.53e-01 | 100.0% | 95.3% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.66 | 57.0 | 5.24e-01 | 97.3% | 93.8% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.66 | 59.0 | 5.70e-01 | 100.0% | 88.1% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 53.0 | 4.74e-01 | 86.5% | 78.6% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 53.0 | 4.70e-01 | 89.2% | 75.2% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 56.0 | 5.47e-01 | 97.3% | 100.0% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 46.0 | 5.02e-01 | 74.3% | 95.2% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 51.0 | 4.55e-01 | 89.2% | 60.4% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.62 | 55.0 | 3.91e-01 | 100.0% | 84.3% |
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.62 | 53.0 | 4.28e-01 | 97.3% | 79.2% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 42.0 | 4.53e-01 | 70.3% | 88.9% |
| 2npiA03 | 2.40.30.330 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain | 0.62 | 47.0 | 4.26e-01 | 83.8% | 93.2% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 53.0 | 5.28e-01 | 100.0% | 97.5% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.79e-01 | 95.9% | 98.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 4.27e-01 | 73.0% | 84.8% |
| 2n01B00 | 2.60.40.2500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 47.0 | 4.20e-01 | 97.3% | 63.2% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 43.0 | 3.87e-01 | 81.1% | 71.4% |
| 2g3mA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 41.0 | 3.94e-01 | 98.6% | 66.3% |
| 1k8mA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 37.0 | 3.61e-01 | 71.6% | 96.6% |
| 3amkA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 45.0 | 4.22e-01 | 98.6% | 79.0% |
| 1a3qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.25e-01 | 100.0% | 86.7% |
| 4n6rB00 | 2.60.40.3960 | Mainly Beta › Sandwich › Immunoglobulin-like › Velvet domain | 0.54 | 45.0 | 3.46e-01 | 100.0% | 65.7% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.54 | 45.0 | 3.77e-01 | 100.0% | 92.4% |
| 1b4rA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.95e-01 | 98.6% | 77.5% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 44.0 | 3.82e-01 | 100.0% | 73.0% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.10e-01 | 98.6% | 80.2% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 4.02e-01 | 95.9% | 75.0% |
| 1gff200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.43e-01 | 100.0% | 86.4% |
| 2w3jA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 42.0 | 3.67e-01 | 100.0% | 92.7% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 43.0 | 3.61e-01 | 97.3% | 72.5% |
| 3up1B01 | 2.60.40.1870 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 4.07e-01 | 98.6% | 78.5% |
| 4gklA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 38.0 | 3.73e-01 | 100.0% | 73.9% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.51 | 40.0 | 3.93e-01 | 91.9% | 81.0% |
| 1mzpA01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.51 | 42.0 | 3.58e-01 | 94.6% | 90.5% |
| 3hnmA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 43.0 | 3.41e-01 | 100.0% | 48.5% |
| 2k78A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 3.58e-01 | 98.6% | 56.3% |
| 1fnfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.90e-01 | 98.6% | 78.7% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.50 | 42.0 | 2.62e-01 | 100.0% | 15.3% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.87 | 79.0 | 7.93e-01 | 97.3% | 98.7% |
| 5056460 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.86 | 75.0 | 7.55e-01 | 100.0% | 92.0% |
| 3272448 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.83 | 78.0 | 7.07e-01 | 100.0% | 86.3% |
| 1954233 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.82 | 77.0 | 7.19e-01 | 100.0% | 96.6% |
| 3964292 | 1.1.13.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 | 0.82 | 76.0 | 6.54e-01 | 100.0% | 66.4% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.82 | 69.0 | 7.16e-01 | 100.0% | 95.7% |
| 1714452 | 11.21.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like | 0.81 | 74.0 | 7.03e-01 | 100.0% | 96.6% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.80 | 70.0 | 7.06e-01 | 100.0% | 93.3% |
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.76 | 70.0 | 6.87e-01 | 100.0% | 92.5% |
| 3712506 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 70.0 | 6.63e-01 | 100.0% | 88.2% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.76 | 70.0 | 6.79e-01 | 100.0% | 93.8% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 67.0 | 6.70e-01 | 98.6% | 96.0% |
| 4995824 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 65.0 | 6.57e-01 | 94.6% | 98.6% |
| 3593939 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 68.0 | 6.19e-01 | 100.0% | 89.5% |
| 1281033 | 1.1.7.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF4438 | 0.73 | 65.0 | 5.09e-01 | 100.0% | 76.9% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 61.0 | 6.17e-01 | 100.0% | 92.0% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 64.0 | 6.38e-01 | 100.0% | 96.0% |
| 3542635 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.72 | 65.0 | 5.30e-01 | 100.0% | 66.7% |
| 4521518 | 1.1.7.121 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 | 0.72 | 65.0 | 5.57e-01 | 100.0% | 63.5% |
| 3904189 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 62.0 | 5.63e-01 | 100.0% | 72.0% |
| 4011239 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 62.0 | 6.08e-01 | 100.0% | 90.0% |
| 4147655 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.71 | 64.0 | 5.73e-01 | 100.0% | 73.0% |
| 3642150 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 60.0 | 5.56e-01 | 98.6% | 73.7% |
| 4080130 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 61.0 | 6.08e-01 | 97.3% | 93.3% |
| 4402716 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 60.0 | 5.77e-01 | 100.0% | 83.5% |
| 4166012 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 60.0 | 6.04e-01 | 98.6% | 94.7% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 60.0 | 5.82e-01 | 100.0% | 84.7% |
| 4230122 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 60.0 | 5.48e-01 | 100.0% | 72.0% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 60.0 | 6.05e-01 | 98.6% | 96.0% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 58.0 | 5.86e-01 | 100.0% | 93.3% |
| 4079417 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.69 | 62.0 | 5.33e-01 | 100.0% | 76.5% |
| 2556060 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 60.0 | 5.94e-01 | 100.0% | 93.6% |
| 3996145 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.69 | 62.0 | 5.11e-01 | 100.0% | 69.2% |
| 5058648 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 61.0 | 5.65e-01 | 100.0% | 92.6% |
| 4954732 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.69 | 60.0 | 5.63e-01 | 97.3% | 94.4% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 61.0 | 5.64e-01 | 100.0% | 90.5% |
| 3801941 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 55.0 | 4.82e-01 | 89.2% | 87.8% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 60.0 | 5.70e-01 | 100.0% | 93.3% |
| 4980136 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.68 | 60.0 | 5.73e-01 | 100.0% | 96.6% |
| 4083044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.68 | 60.0 | 6.04e-01 | 100.0% | 97.3% |
| 4989950 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 60.0 | 5.23e-01 | 100.0% | 100.0% |
| 5076995 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.68 | 60.0 | 5.85e-01 | 100.0% | 91.3% |
| 4061526 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.68 | 59.0 | 5.41e-01 | 100.0% | 97.0% |
| 4949379 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.68 | 59.0 | 5.37e-01 | 98.6% | 90.0% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 57.0 | 5.26e-01 | 100.0% | 73.7% |
| 1790393 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 57.0 | 5.61e-01 | 100.0% | 87.8% |
| 4337888 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.67 | 59.0 | 5.35e-01 | 98.6% | 90.0% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 58.0 | 5.11e-01 | 100.0% | 65.5% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 58.0 | 5.82e-01 | 100.0% | 96.0% |
| 3214011 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.67 | 59.0 | 5.14e-01 | 100.0% | 77.4% |
| 3785974 | 3613.1.1.1 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Clp1 | 0.67 | 52.0 | 4.21e-01 | 83.8% | 89.9% |
| 3452625 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.67 | 60.0 | 5.44e-01 | 100.0% | 90.0% |
| 3590326 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.66 | 56.0 | 5.09e-01 | 97.3% | 95.2% |
| 3516562 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.66 | 57.0 | 4.72e-01 | 100.0% | 66.4% |
| 3944005 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.66 | 59.0 | 4.85e-01 | 100.0% | 64.7% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 57.0 | 5.49e-01 | 100.0% | 84.9% |
| 3987212 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.66 | 57.0 | 5.10e-01 | 98.6% | 93.3% |
| 4956344 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.65 | 51.0 | 5.13e-01 | 83.8% | 93.3% |
| 5011201 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.65 | 51.0 | 4.67e-01 | 83.8% | 93.7% |
| 1394554 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 46.0 | 4.95e-01 | 74.3% | 92.2% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.65 | 57.0 | 5.60e-01 | 100.0% | 96.2% |
| 4222919 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.64 | 53.0 | 4.48e-01 | 91.9% | 67.2% |
| 4270536 | 1.1.7.96 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FIST_C | 0.64 | 57.0 | 5.15e-01 | 100.0% | 94.0% |
| 3988584 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.62 | 40.0 | 3.68e-01 | 100.0% | 49.0% |
| 4395520 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 53.0 | 4.96e-01 | 100.0% | 88.4% |
| 4599558 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 52.0 | 4.94e-01 | 95.9% | 100.0% |
| 1005556 | 10.2.1.65 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › VP17_central_barrel | 0.59 | 49.0 | 4.68e-01 | 95.9% | 97.7% |
| 3273150 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.58 | 50.0 | 4.59e-01 | 100.0% | 80.0% |
| 3275146 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.56 | 47.0 | 4.53e-01 | 100.0% | 81.1% |
| 3251337 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.05e-01 | 100.0% | 62.2% |
| 3258963 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.62e-01 | 98.6% | 90.0% |
| 3636432 | 4.1.1.314 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like | 0.56 | 47.0 | 3.25e-01 | 90.5% | 42.5% |
| 184925 | 11.21.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › Tailspike_C | 0.55 | 44.0 | 4.49e-01 | 97.3% | 91.8% |
| 4430009 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.55 | 46.0 | 3.52e-01 | 100.0% | 40.5% |
| 1779244 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.54 | 46.0 | 4.00e-01 | 100.0% | 70.6% |
| 3093592 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.54 | 44.0 | 3.88e-01 | 97.3% | 96.7% |
| 149587 | 11.1.5.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 | 0.53 | 45.0 | 3.74e-01 | 100.0% | 58.2% |
| 3580256 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 45.0 | 4.25e-01 | 100.0% | 77.9% |
| 3794175 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 40.0 | 3.81e-01 | 100.0% | 70.5% |
| 3551607 | 11.1.1.283 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL2RB_N1 | 0.50 | 40.0 | 3.73e-01 | 95.9% | 75.2% |
D2
high
residues 430-519
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 49.0 | 4.78e-01 | 71.1% | 78.6% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.70 | 52.0 | 5.16e-01 | 77.8% | 84.0% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 56.0 | 5.77e-01 | 87.8% | 98.9% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.69 | 51.0 | 5.04e-01 | 77.8% | 83.5% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 47.0 | 4.80e-01 | 72.2% | 82.0% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.67 | 50.0 | 4.88e-01 | 77.8% | 84.5% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.66 | 45.0 | 4.88e-01 | 70.0% | 84.0% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 50.0 | 5.00e-01 | 82.2% | 95.7% |
| 1a3wB03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.66 | 49.0 | 4.78e-01 | 77.8% | 84.5% |
| 5trdA02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.66 | 47.0 | 4.11e-01 | 74.4% | 79.3% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 45.0 | 4.65e-01 | 72.2% | 75.9% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 50.0 | 4.85e-01 | 86.7% | 96.1% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 38.0 | 4.57e-01 | 93.3% | 98.2% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 48.0 | 4.65e-01 | 86.7% | 97.2% |
| 6qe7A01 | 3.90.182.10 | Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 | 0.61 | 42.0 | 3.66e-01 | 71.1% | 64.7% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.74e-01 | 74.4% | 89.3% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 4.22e-01 | 78.9% | 82.3% |
| 3l9bA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 43.0 | 3.92e-01 | 82.2% | 87.3% |
| 1kkeA02 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.57 | 40.0 | 3.51e-01 | 73.3% | 90.1% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 3.99e-01 | 75.6% | 89.1% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.11e-01 | 77.8% | 80.4% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.10e-01 | 78.9% | 85.6% |
| 1bpvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.84e-01 | 76.7% | 79.8% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 39.0 | 3.61e-01 | 74.4% | 92.2% |
| 2pn5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 3.85e-01 | 73.3% | 77.2% |
| 4d8oA03 | 2.60.40.2660 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.71e-01 | 81.1% | 80.2% |
| 3bpnC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.91e-01 | 80.0% | 86.1% |
| 2yuwA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.93e-01 | 80.0% | 83.7% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.94e-01 | 80.0% | 88.3% |
| 4aefA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.96e-01 | 81.1% | 76.8% |
| 3bwsA01 | 2.60.40.3070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 38.0 | 3.95e-01 | 76.7% | 82.1% |
| 3nvqA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.89e-01 | 74.4% | 81.0% |
| 5f7uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.52e-01 | 75.6% | 82.0% |
| 4lsdF00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.80e-01 | 80.0% | 79.6% |
| 3oz2A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 45.0 | 3.81e-01 | 100.0% | 56.2% |
| 1okqA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 3.50e-01 | 92.2% | 77.1% |
| 6mfaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.97e-01 | 78.9% | 93.7% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 39.0 | 3.15e-01 | 83.3% | 83.8% |
| 5e6zC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.64e-01 | 80.0% | 80.2% |
| 6i6rB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.74e-01 | 80.0% | 78.8% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.63e-01 | 92.2% | 66.9% |
| 2xtsA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 3.71e-01 | 91.1% | 73.8% |
| 2dv6A01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.50 | 38.0 | 3.53e-01 | 80.0% | 92.9% |
| 2k78A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.26e-01 | 75.6% | 88.9% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057245 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.70 | 52.0 | 5.25e-01 | 77.8% | 83.3% |
| 4932128 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.70 | 50.0 | 5.15e-01 | 74.4% | 84.7% |
| 3590326 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.68 | 50.0 | 4.76e-01 | 76.7% | 78.1% |
| 5072694 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.68 | 50.0 | 5.16e-01 | 76.7% | 84.7% |
| 1562394 | 1.1.8.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GlxA | 0.68 | 57.0 | 5.34e-01 | 90.0% | 100.0% |
| 4927036 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.67 | 50.0 | 5.14e-01 | 80.0% | 96.5% |
| 4514735 | 1049.2.1.4 ↗ | alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J | 0.64 | 56.0 | 4.37e-01 | 95.6% | 48.4% |
| 5078561 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.64 | 51.0 | 5.05e-01 | 87.8% | 83.9% |
| 3950185 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 51.0 | 5.20e-01 | 91.1% | 93.3% |
| 4029902 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.61 | 50.0 | 4.53e-01 | 92.2% | 80.0% |
| 4505040 | 11.1.1.245 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 | 0.61 | 43.0 | 4.55e-01 | 78.9% | 84.8% |
| 3274754 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.15e-01 | 76.7% | 75.2% |
| 2816798 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.59 | 51.0 | 4.85e-01 | 96.7% | 92.7% |
| 3254159 | 11.1.1.820 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd | 0.59 | 44.0 | 4.42e-01 | 82.2% | 83.2% |
| 3975943 | 11.1.1.42 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C | 0.59 | 44.0 | 4.44e-01 | 80.0% | 84.4% |
| None | — | 0.58 | 50.0 | 3.39e-01 | 94.4% | 77.4% | |
| 1237482 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.58 | 42.0 | 4.03e-01 | 76.7% | 99.1% |
| 3253378 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 3.62e-01 | 74.4% | 87.4% |
| 3260260 | 11.1.1.1148 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29751 | 0.58 | 43.0 | 4.01e-01 | 78.9% | 82.6% |
| 3250855 | 11.1.1.820 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd | 0.58 | 43.0 | 4.33e-01 | 84.4% | 81.1% |
| 3555135 | 11.1.1.126 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL4Ra_N | 0.57 | 42.0 | 4.01e-01 | 78.9% | 71.8% |
| 5070700 | 11.1.1.124 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glucodextran_B | 0.57 | 40.0 | 4.26e-01 | 73.3% | 90.0% |
| 5043602 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 4.25e-01 | 81.1% | 77.9% |
| 4000172 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.56 | 40.0 | 3.69e-01 | 74.4% | 94.8% |
| 3201022 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 3.76e-01 | 76.7% | 78.3% |
| 3841998 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 41.0 | 4.07e-01 | 78.9% | 84.2% |
| 4031328 | 10.29.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins | 0.55 | 40.0 | 3.49e-01 | 76.7% | 56.9% |
| 3248952 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 4.14e-01 | 77.8% | 87.1% |
| 3576892 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 40.0 | 3.70e-01 | 76.7% | 70.4% |
| 302818 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.55 | 39.0 | 3.79e-01 | 93.3% | 66.0% |
| 5055400 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.55 | 38.0 | 3.47e-01 | 73.3% | 71.2% |
| 4228015 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.55 | 47.0 | 3.02e-01 | 97.8% | 37.4% |
| 4957969 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 47.0 | 3.97e-01 | 97.8% | 70.3% |
| 4127135 | 10.32.1.12 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 | 0.54 | 40.0 | 3.42e-01 | 78.9% | 86.5% |
| 4248008 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.54 | 47.0 | 3.05e-01 | 98.9% | 41.8% |
| 4066022 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.54 | 47.0 | 3.05e-01 | 98.9% | 41.8% |
| 4417822 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.54 | 39.0 | 3.86e-01 | 80.0% | 72.6% |
| 5022780 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.82e-01 | 76.7% | 75.0% |
| 3099003 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 40.0 | 3.84e-01 | 78.9% | 77.9% |
| 3926914 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.54 | 46.0 | 4.12e-01 | 94.4% | 78.4% |
| 3413654 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 40.0 | 3.79e-01 | 81.1% | 75.5% |
| 2642818 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 38.0 | 3.07e-01 | 78.9% | 38.0% |
| 3275824 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.70e-01 | 75.6% | 87.0% |
| 3800367 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.53 | 45.0 | 4.09e-01 | 94.4% | 80.0% |
| 3532015 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 39.0 | 3.84e-01 | 80.0% | 82.0% |
| 5014647 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.72e-01 | 81.1% | 70.0% |
| 3617193 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 38.0 | 3.35e-01 | 78.9% | 92.1% |
| 4374005 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.34e-01 | 72.2% | 95.7% |
| 4243035 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.52 | 46.0 | 3.03e-01 | 100.0% | 28.9% |
| 3270191 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 3.62e-01 | 77.8% | 87.6% |
| 2563286 | 11.1.1.861 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NEAT, DUF2283 | 0.51 | 41.0 | 3.58e-01 | 90.0% | 83.7% |
| 3588404 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 42.0 | 3.54e-01 | 94.4% | 52.9% |
| 3171997 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 38.0 | 3.57e-01 | 81.1% | 93.0% |
| 3804238 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 42.0 | 3.66e-01 | 94.4% | 57.9% |
| 3663362 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 43.0 | 3.62e-01 | 96.7% | 56.2% |
| 5040690 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 39.0 | 3.91e-01 | 92.2% | 81.1% |
D3
medium
residues 1-97
Domain cluster:
representative
D4
medium
residues 333-416
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 2.96e-01 | 76.2% | 93.0% |