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NC_006883.2__YP_214527.1__PSSM2_296__00296
Bact-VirNC_006883.2__YP_214527.1__PSSM2_296__00296
Identity
- Accession:
- NC_006883 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Salacisavirus›
Prochlorococcus_phage_P-SSM2
TaxID: 268746
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 151-252
Domain cluster:
rep: MN018232.1__QDH50655.1__X__00189__D210-318
CATH (64)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.85 | 80.0 | 7.72e-01 | 100.0% | 95.6% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 46.0 | 4.93e-01 | 100.0% | 76.5% |
| 4k15A00 | 2.60.40.3860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 51.0 | 4.55e-01 | 75.5% | 74.6% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 44.0 | 2.83e-01 | 100.0% | 13.7% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.65 | 51.0 | 3.85e-01 | 82.4% | 88.1% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 48.0 | 4.85e-01 | 100.0% | 79.4% |
| 7altB01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 47.0 | 4.07e-01 | 77.5% | 68.4% |
| 7alkA01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 46.0 | 3.99e-01 | 76.5% | 70.0% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.63 | 51.0 | 3.89e-01 | 87.3% | 84.7% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 57.0 | 5.07e-01 | 100.0% | 96.5% |
| 4xl1E01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 45.0 | 3.99e-01 | 77.5% | 75.5% |
| 1uunA01 | 2.60.40.1650 | Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) | 0.62 | 44.0 | 4.06e-01 | 73.5% | 98.5% |
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 49.0 | 5.07e-01 | 100.0% | 91.5% |
| 1x1iA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.61 | 39.0 | 3.74e-01 | 100.0% | 54.2% |
| 4gf4A00 | 2.40.160.180 | Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB | 0.61 | 44.0 | 3.13e-01 | 74.5% | 28.8% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.61 | 51.0 | 3.76e-01 | 92.2% | 95.7% |
| 1i82A00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 54.0 | 4.43e-01 | 100.0% | 67.7% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.61 | 54.0 | 5.17e-01 | 99.0% | 86.3% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 5.22e-01 | 100.0% | 94.1% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 47.0 | 4.28e-01 | 91.2% | 98.0% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 43.0 | 3.72e-01 | 100.0% | 47.2% |
| 4aqzA00 | 2.60.40.3470 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 39.0 | 3.59e-01 | 100.0% | 51.4% |
| 2pslA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.58 | 49.0 | 3.78e-01 | 91.2% | 57.1% |
| 7nitA06 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 51.0 | 4.33e-01 | 100.0% | 94.8% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.57 | 46.0 | 3.65e-01 | 83.3% | 80.7% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 41.0 | 4.31e-01 | 100.0% | 83.0% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.57 | 45.0 | 3.65e-01 | 83.3% | 85.8% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 51.0 | 4.55e-01 | 98.0% | 72.5% |
| 2ccvA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 49.0 | 4.98e-01 | 100.0% | 98.0% |
| 1umzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 3.72e-01 | 100.0% | 72.7% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 50.0 | 4.07e-01 | 100.0% | 51.5% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 47.0 | 4.45e-01 | 99.0% | 74.6% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 42.0 | 3.56e-01 | 80.4% | 89.8% |
| 1guiA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 50.0 | 4.38e-01 | 100.0% | 98.7% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 51.0 | 4.36e-01 | 100.0% | 88.3% |
| 2c9jA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.56 | 47.0 | 3.72e-01 | 92.2% | 58.2% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 47.0 | 3.61e-01 | 90.2% | 54.5% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 47.0 | 3.50e-01 | 91.2% | 51.4% |
| 2dd7A00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.55 | 46.0 | 3.62e-01 | 90.2% | 57.9% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.55 | 45.0 | 3.62e-01 | 89.2% | 75.6% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 3.46e-01 | 100.0% | 72.7% |
| 1hn0A04 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.54 | 37.0 | 3.51e-01 | 100.0% | 58.2% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 42.0 | 3.50e-01 | 83.3% | 85.9% |
| 5x7qA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 49.0 | 4.53e-01 | 99.0% | 100.0% |
| 8bddA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 39.0 | 2.77e-01 | 77.5% | 45.0% |
| 1opoA02 | 2.60.40.1780 | Mainly Beta › Sandwich › Immunoglobulin-like › Carmovirus coat protein | 0.54 | 47.0 | 4.72e-01 | 100.0% | 96.1% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 4.42e-01 | 99.0% | 86.1% |
| 2xdhA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 48.0 | 4.36e-01 | 100.0% | 75.4% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 47.0 | 4.33e-01 | 100.0% | 93.3% |
| 2zgoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 4.01e-01 | 100.0% | 80.8% |
| 1dglA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 48.0 | 3.65e-01 | 100.0% | 64.1% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.53 | 43.0 | 3.10e-01 | 93.1% | 98.9% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 42.0 | 3.24e-01 | 88.2% | 80.4% |
| 3zxaC02 | 2.60.40.3420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 4.61e-01 | 100.0% | 98.1% |
| 3wnoA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.31e-01 | 100.0% | 97.7% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 44.0 | 3.82e-01 | 100.0% | 96.6% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.54e-01 | 100.0% | 87.1% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.51 | 44.0 | 3.93e-01 | 98.0% | 74.8% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 46.0 | 3.44e-01 | 100.0% | 45.1% |
| 2zoeB02 | 2.60.120.1080 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.94e-01 | 99.0% | 72.4% |
| 2p0lA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 43.0 | 3.25e-01 | 95.1% | 88.7% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 38.0 | 2.91e-01 | 80.4% | 98.4% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 34.0 | 3.35e-01 | 70.6% | 93.0% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 3.45e-01 | 100.0% | 83.9% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 441034 | 3386.1.1.4 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C | 0.85 | 80.0 | 7.55e-01 | 100.0% | 90.8% |
| 3582591 | 10.7.1.0 ↗ | beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 | 0.75 | 52.0 | 4.99e-01 | 100.0% | 63.5% |
| 3972375 | 10.20.1.3 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Transglut_i_TM | 0.68 | 47.0 | 4.59e-01 | 100.0% | 65.5% |
| 5023489 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 56.0 | 5.50e-01 | 99.0% | 90.0% |
| 3477921 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 57.0 | 5.00e-01 | 100.0% | 74.8% |
| 4990610 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 54.0 | 5.49e-01 | 100.0% | 95.9% |
| 5009359 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.62 | 50.0 | 4.96e-01 | 100.0% | 81.8% |
| 2879296 | 10.32.1.78 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PirA-like | 0.62 | 53.0 | 5.38e-01 | 95.1% | 100.0% |
| 3252861 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.61 | 53.0 | 4.13e-01 | 100.0% | 45.1% |
| 3480027 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.61 | 45.0 | 3.80e-01 | 78.4% | 56.6% |
| 3962617 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.61 | 51.0 | 4.05e-01 | 100.0% | 45.4% |
| 1121 | 10.32.1.35 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YpM | 0.61 | 54.0 | 5.17e-01 | 99.0% | 86.3% |
| 4943783 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 44.0 | 4.09e-01 | 77.5% | 72.9% |
| 4038352 | 10.32.1.273 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29775 | 0.60 | 54.0 | 5.23e-01 | 100.0% | 92.2% |
| 3839285 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.60 | 45.0 | 3.74e-01 | 79.4% | 97.8% |
| 3505571 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.60 | 42.0 | 3.79e-01 | 72.5% | 65.5% |
| 5039338 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.59 | 53.0 | 5.11e-01 | 100.0% | 96.6% |
| 5082445 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 53.0 | 5.18e-01 | 100.0% | 96.4% |
| 4959959 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 50.0 | 5.11e-01 | 100.0% | 97.0% |
| 3919527 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 50.0 | 4.96e-01 | 100.0% | 91.4% |
| 3928254 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.58 | 52.0 | 5.00e-01 | 100.0% | 87.8% |
| 3928463 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 51.0 | 5.11e-01 | 100.0% | 94.3% |
| 4351615 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 48.0 | 4.96e-01 | 100.0% | 96.8% |
| 5060870 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 52.0 | 5.19e-01 | 100.0% | 98.1% |
| 28728 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 48.0 | 3.79e-01 | 91.2% | 58.5% |
| 4883811 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 48.0 | 3.75e-01 | 91.2% | 56.4% |
| 3941824 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 50.0 | 4.35e-01 | 100.0% | 88.5% |
| 5040310 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 50.0 | 4.89e-01 | 100.0% | 100.0% |
| 3519566 | 10.32.1.230 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N | 0.57 | 50.0 | 4.62e-01 | 99.0% | 94.1% |
| 3663362 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 52.0 | 4.44e-01 | 100.0% | 73.8% |
| 3976425 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.57 | 46.0 | 3.66e-01 | 87.3% | 76.7% |
| 3180910 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 52.0 | 4.64e-01 | 100.0% | 100.0% |
| 4945064 | 10.1.2.192 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Big_7 | 0.57 | 51.0 | 4.94e-01 | 100.0% | 97.4% |
| 1283375 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.57 | 48.0 | 3.74e-01 | 91.2% | 56.2% |
| 3987367 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 51.0 | 5.06e-01 | 100.0% | 95.4% |
| 3761249 | 11.2.1.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MAP10_N | 0.56 | 41.0 | 3.81e-01 | 77.5% | 76.3% |
| 4604481 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.56 | 40.0 | 3.19e-01 | 76.5% | 51.7% |
| 3810972 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.56 | 49.0 | 3.79e-01 | 100.0% | 75.1% |
| 308837 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.56 | 48.0 | 3.71e-01 | 92.2% | 56.9% |
| 3514837 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 50.0 | 4.82e-01 | 100.0% | 88.7% |
| 1157836 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.56 | 45.0 | 3.89e-01 | 85.3% | 73.7% |
| 358775 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.56 | 45.0 | 3.80e-01 | 85.3% | 66.9% |
| 4367626 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.56 | 41.0 | 3.17e-01 | 80.4% | 50.2% |
| 3269848 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.56 | 50.0 | 4.60e-01 | 100.0% | 84.4% |
| 4003166 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.56 | 49.0 | 4.61e-01 | 99.0% | 80.8% |
| 3241410 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.56 | 49.0 | 4.83e-01 | 100.0% | 95.5% |
| 297731 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.55 | 47.0 | 3.65e-01 | 91.2% | 58.1% |
| 3408524 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 49.0 | 4.69e-01 | 100.0% | 85.0% |
| 3221888 | 10.32.1.218 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 | 0.55 | 49.0 | 4.64e-01 | 100.0% | 85.4% |
| 399921 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 49.0 | 4.39e-01 | 100.0% | 97.3% |
| 5040234 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 48.0 | 4.70e-01 | 100.0% | 90.4% |
| 3849839 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.55 | 40.0 | 4.05e-01 | 75.5% | 98.0% |
| 3300834 | 10.32.1.210 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C | 0.55 | 48.0 | 4.66e-01 | 100.0% | 87.8% |
| 4291120 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.55 | 49.0 | 4.51e-01 | 100.0% | 83.0% |
| 4019571 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 48.0 | 3.92e-01 | 99.0% | 83.0% |
| 3342352 | 10.32.1.210 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C | 0.55 | 48.0 | 4.74e-01 | 100.0% | 91.8% |
| 3796900 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 4.57e-01 | 100.0% | 88.2% |
| 4627197 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.54 | 40.0 | 3.37e-01 | 76.5% | 85.5% |
| 4295345 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.54 | 42.0 | 3.77e-01 | 86.3% | 90.3% |
| 3413336 | 10.32.1.225 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 | 0.54 | 48.0 | 4.21e-01 | 100.0% | 85.2% |
| 3625508 | 11.1.5.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7808 | 0.54 | 49.0 | 4.58e-01 | 100.0% | 98.4% |
| 3588187 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 4.27e-01 | 100.0% | 98.0% |
| 3489835 | 11.1.5.94 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 | 0.54 | 47.0 | 3.95e-01 | 100.0% | 69.7% |
| 4172901 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 48.0 | 4.65e-01 | 100.0% | 92.2% |
| 3417166 | 10.1.1.34 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF3472 | 0.54 | 46.0 | 3.71e-01 | 100.0% | 71.1% |
| 4927080 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 43.0 | 3.99e-01 | 91.2% | 99.3% |
| None | — | 0.53 | 40.0 | 2.50e-01 | 81.4% | 44.6% | |
| 3352288 | 10.1.1.12 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16,XET_C | 0.53 | 46.0 | 3.42e-01 | 100.0% | 67.1% |
| 5007540 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 47.0 | 4.00e-01 | 100.0% | 69.8% |
| 4174868 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.53 | 39.0 | 2.43e-01 | 81.4% | 86.4% |
| 4215475 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.53 | 39.0 | 2.44e-01 | 81.4% | 88.1% |
| 4026812 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.53 | 41.0 | 3.59e-01 | 85.3% | 80.0% |
| 4029291 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 46.0 | 4.18e-01 | 100.0% | 80.7% |
| 3792868 | 11.1.5.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7808 | 0.52 | 46.0 | 4.35e-01 | 100.0% | 81.5% |
| 1839958 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.51 | 41.0 | 3.95e-01 | 100.0% | 75.0% |
| 1144292 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.51 | 46.0 | 3.44e-01 | 100.0% | 45.3% |
| 3188943 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 39.0 | 2.70e-01 | 84.3% | 43.0% |
| 3729448 | 868.1.1.10 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7905 | 0.50 | 40.0 | 2.85e-01 | 87.3% | 82.3% |
| 3263284 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.50 | 44.0 | 3.45e-01 | 100.0% | 48.5% |
| 3692315 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.59e-01 | 100.0% | 75.0% |
D2
medium
residues 7-58
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.55 | 46.0 | 3.90e-01 | 100.0% | 91.6% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.54 | 39.0 | 4.05e-01 | 100.0% | 87.0% |
| 1vmeB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 42.0 | 2.79e-01 | 94.2% | 46.6% |
| 1x9yA01 | 3.10.500.10 | Alpha Beta › Roll › prostaphopain b, domain 1 › Staphopain proregion domain | 0.52 | 36.0 | 2.69e-01 | 76.9% | 62.4% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 45.0 | 2.81e-01 | 96.2% | 54.2% |
| 2zo4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 42.0 | 2.78e-01 | 96.2% | 54.8% |
| 2fuqA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.50 | 36.0 | 2.34e-01 | 80.8% | 59.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3936759 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.64 | 47.0 | 4.22e-01 | 80.8% | 85.3% |
| 3236918 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.61 | 46.0 | 3.94e-01 | 84.6% | 92.2% |
| 3854692 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 51.0 | 4.28e-01 | 100.0% | 66.3% |
| 4940843 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.55 | 37.0 | 2.24e-01 | 71.2% | 12.7% |
| 4944961 | 4121.1.1.19 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF27230 | 0.54 | 44.0 | 2.75e-01 | 100.0% | 53.4% |
| 2883161 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.54 | 40.0 | 3.00e-01 | 88.5% | 65.4% |
| 4123064 | 3708.1.1.0 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains | 0.53 | 45.0 | 3.98e-01 | 94.2% | 89.3% |
| 4030668 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.53 | 37.0 | 3.41e-01 | 94.2% | 58.5% |