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NC_006884.2__YP_004030772.1__PSSM4_074.2__00087

Bact-Vir

NC_006884.2__YP_004030772.1__PSSM4_074.2__00087

Identity

Accession:
NC_006884 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Ronodorvirus› Prochlorococcus_phage_P-SSM4

TaxID: 268747

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-80
PDB
Domain cluster: rep: OQ319120.1__WDS61079.1__SBM1_00212__00206__D9-78
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 47.0 4.14e-01 78.7% 44.0%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 48.0 3.81e-01 78.7% 33.8%
6l3tA01 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.59 42.0 3.07e-01 74.7% 28.1%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 40.0 3.75e-01 70.7% 63.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5035493 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.82 49.0 4.27e-01 73.3% 42.9%
3628456 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.81 51.0 4.17e-01 76.0% 37.5%
5029669 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.81 47.0 3.94e-01 73.3% 37.5%
3787269 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.80 50.0 4.34e-01 76.0% 43.6%
4028685 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.79 50.0 4.30e-01 76.0% 43.6%
3675304 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.78 50.0 4.21e-01 77.3% 40.8%
60305 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.78 47.0 4.13e-01 73.3% 43.4%
4995244 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.77 50.0 4.34e-01 81.3% 45.5%
4112182 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.72 51.0 4.36e-01 92.0% 47.5%
3790375 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.69 50.0 4.14e-01 85.3% 44.8%
3228583 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.68 51.0 4.37e-01 78.7% 58.3%
3482328 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 50.0 4.44e-01 78.7% 63.8%
3579472 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.66 50.0 4.07e-01 78.7% 51.5%
3392569 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 48.0 4.01e-01 76.0% 52.0%
4017372 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.65 51.0 4.41e-01 84.0% 59.1%
3832390 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 45.0 3.75e-01 73.3% 45.6%
5060418 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 49.0 4.12e-01 84.0% 59.2%
3594965 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.61 50.0 4.02e-01 88.0% 51.4%
3202986 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.60 46.0 3.90e-01 82.7% 51.2%
3935332 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.55 45.0 3.80e-01 98.7% 53.1%