Back to structures

NC_007021.1__YP_238546.1__TwortORF286__00012

Bact-Vir

NC_007021.1__YP_238546.1__TwortORF286__00012

Identity

Accession:
NC_007021 ↗
Kingdom:
phage

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-43
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.83 67.0 5.24e-01 90.2% 54.7%
4fzbA02 1.20.5.3070 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.82 69.0 6.98e-01 92.7% 97.5%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.79 64.0 3.66e-01 90.2% 35.5%
4p5aC00 3.30.1360.170 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.77 63.0 3.92e-01 92.7% 20.2%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.76 63.0 4.53e-01 97.6% 34.1%
1kq4A00 3.30.1360.170 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.74 56.0 3.61e-01 85.4% 21.2%
1nh2B00 1.10.287.100 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 51.0 5.02e-01 85.4% 76.1%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.62 44.0 3.06e-01 75.6% 43.5%
2rfqB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.58 44.0 3.43e-01 92.7% 81.7%
6o9aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 48.0 3.21e-01 90.2% 61.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
344927 129.1.1.14 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF2520 0.70 55.0 4.17e-01 90.2% 34.9%