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NC_007021.1__YP_238661.1__TwortORF137__00127
Bact-VirNC_007021.1__YP_238661.1__TwortORF137__00127
Identity
- Accession:
- NC_007021 ↗
- Kingdom:
- phage
Quality
93.0
mean pLDDT
Taxonomy
TaxID: 2908167
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-65
Domain cluster:
rep: OQ850971__WLW38189.1__X__00018__D7-81
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qmoE01 | 2.60.40.4220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 37.0 | 3.36e-01 | 92.2% | 41.7% |
| 4axhA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.64 | 40.0 | 3.18e-01 | 100.0% | 31.2% |
| 2gcuA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 43.0 | 3.02e-01 | 76.6% | 94.5% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.60 | 48.0 | 4.26e-01 | 87.5% | 69.6% |
| 4efzB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 44.0 | 2.94e-01 | 82.8% | 89.3% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 45.0 | 3.98e-01 | 82.8% | 77.1% |
| 3f56A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.59 | 48.0 | 4.02e-01 | 87.5% | 71.7% |
| 1fuwA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 37.0 | 3.31e-01 | 89.1% | 47.3% |
| 4g59C01 | 2.60.40.2920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 48.0 | 4.13e-01 | 93.8% | 58.3% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 51.0 | 3.48e-01 | 100.0% | 32.9% |
| 3d7rA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 40.0 | 2.71e-01 | 82.8% | 69.6% |
| 3li9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 45.0 | 3.78e-01 | 100.0% | 87.1% |
| 1bxgA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.54 | 45.0 | 3.44e-01 | 87.5% | 47.4% |
| 1vw4700 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.54 | 45.0 | 3.89e-01 | 96.9% | 67.9% |
| 1hw7A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.54 | 43.0 | 3.21e-01 | 90.6% | 99.4% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 40.0 | 3.41e-01 | 81.2% | 59.1% |
| 1jz7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.61e-01 | 93.8% | 66.1% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 33.0 | 3.04e-01 | 92.2% | 46.7% |
| 5zi7A04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.52 | 42.0 | 3.81e-01 | 89.1% | 70.1% |
| 2vzsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.58e-01 | 92.2% | 62.7% |
| 6xmtA02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.51 | 45.0 | 3.35e-01 | 100.0% | 84.5% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 31.0 | 3.25e-01 | 90.6% | 67.9% |
| 3vwaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 44.0 | 3.98e-01 | 100.0% | 95.6% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 41.0 | 3.22e-01 | 87.5% | 51.2% |
| 6bnzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 35.0 | 2.83e-01 | 75.0% | 82.1% |
| 3cu7A12 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.50 | 40.0 | 3.18e-01 | 89.1% | 65.9% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580171 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 44.0 | 3.95e-01 | 82.8% | 51.6% |
| 4089697 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.61 | 49.0 | 4.36e-01 | 85.9% | 70.0% |
| 3391302 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 36.0 | 2.28e-01 | 93.8% | 12.3% |
| 4679680 | 312.1.1.12 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DUF4931_C | 0.60 | 48.0 | 4.14e-01 | 89.1% | 80.0% |
| 4107632 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.60 | 49.0 | 4.35e-01 | 87.5% | 72.2% |
| 4070594 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.60 | 48.0 | 4.12e-01 | 87.5% | 65.0% |
| 4001140 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.59 | 43.0 | 3.49e-01 | 81.2% | 38.5% |
| 4107510 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.59 | 48.0 | 4.21e-01 | 87.5% | 67.4% |
| 3387357 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.59 | 48.0 | 4.28e-01 | 87.5% | 68.9% |
| 4129483 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.59 | 47.0 | 4.13e-01 | 87.5% | 66.3% |
| 4019913 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.57 | 44.0 | 3.79e-01 | 85.9% | 82.4% |
| 4102844 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.57 | 45.0 | 3.71e-01 | 84.4% | 49.1% |
| 1276875 | 210.2.1.2 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE | 0.57 | 50.0 | 3.45e-01 | 100.0% | 31.7% |
| 3379086 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.57 | 43.0 | 2.86e-01 | 82.8% | 22.2% |
| 3865742 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.57 | 46.0 | 4.15e-01 | 87.5% | 89.4% |
| 4029068 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.57 | 46.0 | 3.64e-01 | 87.5% | 78.4% |
| 3975784 | 310.3.1.10 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HofO | 0.56 | 42.0 | 3.88e-01 | 82.8% | 65.9% |
| 3217365 | 389.1.2.3 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › DUF282 | 0.55 | 40.0 | 3.39e-01 | 82.8% | 45.5% |
| 3706340 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.55 | 44.0 | 3.47e-01 | 87.5% | 59.2% |
| 3958259 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.54 | 44.0 | 3.83e-01 | 92.2% | 84.8% |
| 3611952 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 44.0 | 3.30e-01 | 87.5% | 73.4% |
| 4261801 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.54 | 45.0 | 3.26e-01 | 93.8% | 50.5% |
| 4020694 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.54 | 40.0 | 2.66e-01 | 84.4% | 50.5% |
| 4972663 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 43.0 | 3.66e-01 | 89.1% | 88.6% |
| 3511808 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.53 | 42.0 | 3.55e-01 | 87.5% | 66.4% |
| 3929349 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 40.0 | 2.94e-01 | 85.9% | 72.2% |
| 3830297 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.52 | 41.0 | 2.70e-01 | 92.2% | 93.4% |
| 3889496 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.52 | 35.0 | 3.34e-01 | 96.9% | 58.7% |
| 3577742 | 6070.1.1.0 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain | 0.52 | 34.0 | 3.90e-01 | 95.3% | 97.8% |
| 3785005 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 29.0 | 2.82e-01 | 82.8% | 39.7% |
| 3811138 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.52 | 37.0 | 2.51e-01 | 76.6% | 21.3% |
| 3250757 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 41.0 | 3.44e-01 | 89.1% | 84.2% |
| 3823795 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 40.0 | 2.73e-01 | 87.5% | 27.2% |
| 4344014 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 38.0 | 3.51e-01 | 79.7% | 60.0% |
| 3939950 | 11.1.1.532 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C6 | 0.52 | 40.0 | 3.71e-01 | 82.8% | 66.3% |
| 4986894 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.52 | 39.0 | 3.97e-01 | 87.5% | 91.7% |
| 4855517 | 101.1.2.9 ↗ | alpha arrays › HTH › HTH › winged helix domain › DNA_topoisoIV | 0.52 | 44.0 | 3.07e-01 | 98.4% | 82.7% |
| 3207176 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.51 | 42.0 | 3.50e-01 | 95.3% | 55.6% |
| 4012007 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 36.0 | 3.14e-01 | 81.2% | 48.0% |
| 4936581 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.51 | 39.0 | 3.55e-01 | 81.2% | 64.7% |
| 3399555 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 42.0 | 3.66e-01 | 95.3% | 70.5% |
| 3941694 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.51 | 36.0 | 3.05e-01 | 75.0% | 77.3% |
| 4026513 | 319.1.1.12 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS_DNAAF11_C | 0.51 | 41.0 | 3.03e-01 | 90.6% | 45.1% |
| 1125247 | 330.3.1.1 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › RF-1 | 0.50 | 38.0 | 3.40e-01 | 81.2% | 61.1% |