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NC_007021.1__YP_238690.1__TwortORF001__00156

Bact-Vir

NC_007021.1__YP_238690.1__TwortORF001__00156

Identity

Accession:
NC_007021 ↗
Kingdom:
phage

Quality

69.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-98
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.75 36.0 4.36e-01 89.6% 68.8%
4eq3A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 47.0 4.66e-01 71.9% 70.4%
2wanA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 50.0 4.94e-01 85.4% 83.5%
5tkyA04 2.60.34.10 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 0.61 48.0 4.53e-01 85.4% 75.0%
3irzA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.54e-01 90.6% 80.8%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.75e-01 84.4% 83.3%
4p0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 4.40e-01 86.5% 83.5%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 40.0 3.98e-01 75.0% 72.3%
4f4oC03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 43.0 4.50e-01 85.4% 96.6%
7vc6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.76e-01 81.2% 72.5%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 44.0 4.46e-01 86.5% 95.7%
5z1aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 3.91e-01 80.2% 67.8%
3seeA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 3.55e-01 90.6% 86.4%
3beuA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 41.0 4.14e-01 82.3% 84.8%
1ajwA00 2.70.50.30 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › Coagulation Factor XIII, subunit A, domain 1 0.55 42.0 3.75e-01 84.4% 77.9%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.53 40.0 3.35e-01 80.2% 48.6%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 41.0 3.54e-01 84.4% 94.2%
3ikwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 2.98e-01 85.4% 78.9%
5jtwA02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.53 41.0 4.05e-01 82.3% 84.0%
5vqfD01 2.60.120.970 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.33e-01 90.6% 45.6%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.94e-01 88.5% 85.1%
7sqxA02 3.30.70.2150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 33.0 3.31e-01 82.3% 62.2%
1umhA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 3.37e-01 87.5% 76.6%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.78e-01 82.3% 88.2%
1e25A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 38.0 2.80e-01 80.2% 83.8%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.74e-01 78.1% 78.3%
1bdoA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 32.0 3.44e-01 81.2% 76.2%
3fmgA02 2.60.120.800 Mainly Beta › Sandwich › Jelly Rolls › Rotavirus outer-layer protein VP7, domain 2 0.51 34.0 3.52e-01 76.0% 73.6%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.51 36.0 3.32e-01 75.0% 69.2%
4brvA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.51 38.0 3.57e-01 82.3% 75.8%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 43.0 3.23e-01 100.0% 93.9%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.50 38.0 3.03e-01 83.3% 85.8%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 39.0 3.79e-01 84.4% 80.2%
3i3tA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 38.0 2.74e-01 81.2% 56.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2625961 3363.1.1.1 beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › ToxB_N 0.68 33.0 3.87e-01 89.6% 64.7%
4928608 3899.1.1.0 beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 0.61 49.0 4.10e-01 84.4% 59.1%
3501985 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.61 49.0 4.61e-01 88.5% 94.2%
4948087 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 4.32e-01 84.4% 100.0%
3656346 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 42.0 4.38e-01 72.9% 93.2%
3180378 10.9.1.3 beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C 0.60 43.0 3.81e-01 75.0% 84.1%
3445322 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 45.0 3.71e-01 79.2% 48.9%
3672602 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 43.0 4.57e-01 75.0% 98.8%
3804197 207.1.1.238 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3, LRR_13 0.60 44.0 2.82e-01 79.2% 16.2%
4996989 11.1.1.14 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.59 43.0 4.21e-01 80.2% 71.4%
3538214 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 45.0 3.00e-01 83.3% 39.5%
3265771 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 4.48e-01 80.2% 98.6%
3821106 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 41.0 3.45e-01 76.0% 45.3%
3491160 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 42.0 3.66e-01 78.1% 81.3%
3349333 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.57 42.0 2.69e-01 78.1% 17.1%
3830724 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.56 39.0 2.32e-01 72.9% 10.3%
2573861 511.1.1.1 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.56 44.0 4.26e-01 87.5% 93.9%
3543134 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.56 43.0 3.74e-01 84.4% 90.0%
3263845 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.55 43.0 2.79e-01 86.5% 16.5%
184471 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.55 40.0 4.24e-01 79.2% 98.8%
3410708 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.54 45.0 3.83e-01 92.7% 66.1%
3802666 207.1.1.133 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 0.54 39.0 2.54e-01 76.0% 18.1%
5027828 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.54 42.0 3.75e-01 85.4% 95.0%
3272661 12.3.1.46 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.53 40.0 3.12e-01 83.3% 62.9%
5054968 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.86e-01 94.8% 75.5%
3519451 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 41.0 3.61e-01 84.4% 82.1%
3854913 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 42.0 3.24e-01 89.6% 51.7%
3258216 12.3.1.46 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD 0.51 42.0 3.17e-01 87.5% 83.6%
4942494 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.51 38.0 2.94e-01 81.2% 62.9%
3927307 11.1.1.842 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C 0.51 40.0 3.36e-01 88.5% 64.4%
D2 medium residues 207-269
PDB
D3 medium residues 270-570
PDB
D4 medium residues 845-1024
PDB
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 66.0 4.86e-01 100.0% 34.1%
3zscA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 66.0 5.19e-01 100.0% 44.4%
3vmvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 64.0 5.15e-01 100.0% 44.4%
4nk6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 64.0 4.67e-01 100.0% 33.7%
7b7aA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 69.0 5.23e-01 100.0% 41.2%
1o88A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 64.0 4.97e-01 100.0% 41.8%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 60.0 5.77e-01 100.0% 69.5%
3petA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.80 47.0 4.43e-01 100.0% 48.6%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 66.0 5.10e-01 100.0% 43.3%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.78 48.0 5.13e-01 100.0% 70.1%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 70.0 4.99e-01 100.0% 36.0%
5gkqB01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 63.0 4.71e-01 100.0% 37.6%
1hg8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 68.0 5.32e-01 100.0% 47.6%
1k5cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 63.0 4.98e-01 100.0% 45.9%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 66.0 6.05e-01 100.0% 72.1%
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 67.0 4.89e-01 97.8% 38.3%
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 72.0 5.28e-01 100.0% 48.2%
6kqsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 71.0 5.26e-01 100.0% 52.0%
1h80B00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.75 67.0 4.89e-01 100.0% 39.1%
1bheA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 70.0 5.36e-01 100.0% 49.7%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.73 38.0 5.13e-01 88.9% 94.8%
1ogoX02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 60.0 4.62e-01 100.0% 42.2%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.72 49.0 4.80e-01 100.0% 64.2%
1dabA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 57.0 3.99e-01 100.0% 27.8%
2bm5B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.71 44.0 4.42e-01 100.0% 60.6%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 68.0 4.89e-01 100.0% 44.3%
4hwvB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 66.0 4.75e-01 100.0% 56.9%
2w7zA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.70 44.0 4.18e-01 100.0% 53.1%
5z9tA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 64.0 4.49e-01 100.0% 34.5%
3grhA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 67.0 5.02e-01 100.0% 48.1%
3jurA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 67.0 4.86e-01 100.0% 44.6%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.70 43.0 4.57e-01 98.9% 68.8%
7o79A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 64.0 4.82e-01 100.0% 43.5%
1vblA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.70 66.0 4.92e-01 100.0% 59.1%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.69 49.0 3.49e-01 100.0% 26.6%
3eqnA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 64.0 5.00e-01 100.0% 51.5%
7o7aA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.67 64.0 4.79e-01 100.0% 47.1%
3vsvA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.67 64.0 4.45e-01 100.0% 35.3%
4oj5C04 2.160.20.130 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 53.0 5.30e-01 99.4% 81.6%
5gkdA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 61.0 5.18e-01 100.0% 64.9%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 61.0 4.77e-01 99.4% 66.3%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 62.0 4.31e-01 100.0% 35.6%
4oj6C03 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 61.0 4.62e-01 100.0% 45.8%
2inuA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 61.0 4.52e-01 100.0% 44.4%
3eqnA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 60.0 4.69e-01 100.0% 65.7%
2qyuA01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.64 44.0 4.72e-01 99.4% 80.3%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 60.0 5.20e-01 100.0% 75.8%
7dmkA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.64 61.0 5.00e-01 100.0% 65.2%
2yuhA01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 44.0 4.59e-01 99.4% 74.4%
2xt2B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.62 45.0 4.41e-01 100.0% 69.1%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.61 43.0 4.56e-01 99.4% 81.0%
4w8qA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 53.0 4.82e-01 98.3% 76.5%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 53.0 3.49e-01 100.0% 28.9%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.56 47.0 3.57e-01 98.3% 39.0%
5irlA02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.56 43.0 3.59e-01 100.0% 46.0%
1wwlB00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.53 43.0 3.59e-01 100.0% 50.0%
2p1mB02 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.51 40.0 2.93e-01 100.0% 28.4%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5068801 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.93 65.0 5.71e-01 100.0% 51.6%
5045582 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 61.0 4.50e-01 100.0% 29.8%
5034971 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 63.0 5.72e-01 100.0% 54.8%
5067851 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 62.0 4.79e-01 96.7% 35.4%
4970042 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.91 62.0 4.00e-01 100.0% 18.6%
4944812 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 61.0 5.76e-01 100.0% 58.6%
4944973 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 60.0 4.05e-01 100.0% 21.6%
5027394 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 61.0 4.78e-01 100.0% 36.7%
5034990 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 61.0 4.62e-01 100.0% 32.6%
5027439 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 61.0 5.16e-01 100.0% 45.6%
4944588 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 60.0 5.96e-01 100.0% 65.4%
5044622 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 62.0 4.15e-01 100.0% 21.9%
4981078 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.90 61.0 4.91e-01 100.0% 40.3%
5050079 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 60.0 5.40e-01 100.0% 51.9%
4944636 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 63.0 5.10e-01 100.0% 41.6%
5060284 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 63.0 4.64e-01 100.0% 31.1%
5059704 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.89 62.0 4.54e-01 100.0% 30.7%
4982114 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.89 65.0 4.61e-01 100.0% 28.9%
5034599 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 62.0 4.68e-01 100.0% 34.3%
4944883 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 61.0 4.42e-01 100.0% 28.9%
4980561 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.87 64.0 4.85e-01 100.0% 36.2%
5072593 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.86 61.0 4.31e-01 100.0% 27.1%
5017937 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.85 60.0 5.77e-01 100.0% 64.5%
5004184 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.85 67.0 5.20e-01 100.0% 42.0%
3804805 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.85 69.0 5.18e-01 100.0% 38.7%
4969453 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.84 60.0 4.53e-01 100.0% 34.2%
4944416 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 65.0 4.73e-01 100.0% 33.4%
4980525 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 62.0 4.69e-01 100.0% 35.6%
3646146 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.83 70.0 5.14e-01 100.0% 37.2%
3674708 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.83 71.0 5.34e-01 100.0% 41.3%
3335697 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.83 61.0 4.94e-01 100.0% 42.5%
3680585 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.83 61.0 5.50e-01 100.0% 57.1%
4970402 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 61.0 5.17e-01 100.0% 50.5%
3649226 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.81 62.0 4.59e-01 100.0% 34.4%
4970373 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 65.0 4.72e-01 100.0% 33.7%
4355788 207.2.1.76 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim, Beta_helix 0.80 75.0 5.03e-01 100.0% 29.9%
3252135 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.80 71.0 5.08e-01 100.0% 35.7%
4969461 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 61.0 5.23e-01 100.0% 53.8%
3974440 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.80 63.0 4.57e-01 100.0% 34.1%
None 0.80 63.0 4.93e-01 100.0% 43.3%
4944592 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.79 61.0 4.81e-01 100.0% 43.0%
5034985 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.79 60.0 5.90e-01 100.0% 73.7%
5034451 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.79 66.0 5.69e-01 100.0% 59.6%
4968984 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.79 64.0 4.05e-01 100.0% 20.6%
5046331 207.2.1.33 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pel9A-like_beta_helix 0.78 64.0 4.70e-01 100.0% 36.0%
3820382 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.78 67.0 4.96e-01 100.0% 39.0%
3360092 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.78 65.0 5.03e-01 100.0% 43.5%
4981702 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 60.0 4.68e-01 100.0% 40.6%
4968886 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 62.0 4.86e-01 100.0% 43.2%
5071277 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.78 64.0 4.54e-01 100.0% 31.7%
4380662 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.78 70.0 5.21e-01 100.0% 41.5%
5060097 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.78 65.0 5.05e-01 100.0% 44.3%
4980586 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 62.0 4.49e-01 100.0% 33.6%
None 0.78 70.0 5.18e-01 100.0% 41.9%
4981379 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 64.0 5.83e-01 100.0% 67.6%
3341233 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.77 61.0 5.33e-01 100.0% 57.6%
4968174 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 60.0 4.57e-01 100.0% 39.2%
4981827 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.77 61.0 5.80e-01 100.0% 70.5%
5049754 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.77 62.0 5.09e-01 100.0% 50.0%
4399371 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.76 69.0 5.09e-01 100.0% 40.4%
5058698 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.76 60.0 4.60e-01 100.0% 40.8%
1121177 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.76 66.0 6.05e-01 100.0% 72.1%
3342957 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.76 68.0 5.82e-01 100.0% 62.2%
4968922 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.76 61.0 4.44e-01 100.0% 35.2%
5060892 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.76 60.0 4.83e-01 100.0% 46.7%
5078365 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.76 60.0 5.72e-01 100.0% 71.7%
5047513 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.75 64.0 4.49e-01 100.0% 32.6%
4981294 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.75 57.0 5.82e-01 95.0% 80.6%
3653083 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.75 62.0 4.57e-01 100.0% 37.6%
3430925 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.74 65.0 4.78e-01 100.0% 39.8%
5081755 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.74 61.0 4.57e-01 100.0% 38.5%
4952562 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.74 65.0 5.02e-01 100.0% 46.7%
4980652 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.74 61.0 4.46e-01 100.0% 35.2%
397790 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.74 67.0 4.82e-01 100.0% 37.7%
3724364 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.74 69.0 4.96e-01 100.0% 38.0%
4327572 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.74 71.0 4.96e-01 100.0% 43.0%
5060184 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.74 60.0 5.43e-01 100.0% 64.3%
5001276 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.74 57.0 4.70e-01 100.0% 48.1%
None 0.74 61.0 4.67e-01 100.0% 41.0%
3587303 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.73 70.0 5.07e-01 100.0% 40.7%
5049174 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.73 62.0 4.96e-01 100.0% 48.6%
4517293 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.73 70.0 5.05e-01 100.0% 50.3%
3326988 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.73 69.0 5.02e-01 100.0% 44.3%
5031536 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.72 64.0 4.79e-01 100.0% 42.1%
5050408 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.72 64.0 4.70e-01 97.2% 38.6%
3385173 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.72 66.0 5.25e-01 100.0% 51.6%
3449922 207.9.1.6 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 0.71 44.0 4.44e-01 100.0% 60.6%
4241856 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.71 64.0 4.54e-01 100.0% 35.5%
4969216 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.71 62.0 5.11e-01 100.0% 54.9%
4290646 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.71 64.0 4.50e-01 100.0% 34.9%
5078153 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.71 63.0 4.12e-01 100.0% 25.6%
5080121 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.70 61.0 4.74e-01 100.0% 46.0%
3299980 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.68 65.0 4.78e-01 100.0% 44.6%
2429047 207.2.1.14 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.66 62.0 4.57e-01 100.0% 42.1%
4980388 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.65 62.0 4.37e-01 100.0% 36.7%
4931622 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.64 62.0 4.90e-01 100.0% 58.2%
3251267 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.62 57.0 4.38e-01 100.0% 45.7%
3307012 207.2.2.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › Glyco_hydro_28 0.61 51.0 5.41e-01 92.8% 96.9%
D5 medium residues 1025-1092
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 73.0 4.52e-01 100.0% 20.3%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.69 52.0 4.58e-01 100.0% 55.7%
2cf5A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 46.0 3.62e-01 98.5% 37.6%
1w8aA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.60 48.0 3.59e-01 100.0% 33.3%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.57 38.0 3.30e-01 100.0% 39.3%
4q82A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 45.0 3.24e-01 94.1% 29.7%
1dzfA01 3.40.1340.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain 0.51 41.0 3.41e-01 95.6% 56.5%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080121 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.94 79.0 4.77e-01 100.0% 16.9%
5060098 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.94 77.0 4.84e-01 100.0% 19.7%
5004955 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.93 77.0 4.28e-01 100.0% 8.3%
4940647 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 76.0 4.35e-01 100.0% 10.6%
4972664 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.90 74.0 4.69e-01 100.0% 20.0%
5034317 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.89 82.0 5.44e-01 100.0% 28.7%
5060097 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 81.0 4.97e-01 100.0% 18.9%
4952564 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 77.0 4.72e-01 100.0% 18.5%
5049754 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 80.0 4.98e-01 100.0% 21.7%
4982073 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.87 80.0 4.88e-01 100.0% 19.4%
4968215 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.86 75.0 4.86e-01 100.0% 23.8%
3923083 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.85 73.0 4.91e-01 100.0% 28.2%
3572033 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.84 72.0 4.34e-01 100.0% 16.1%
4969187 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 77.0 5.11e-01 100.0% 30.4%
3263729 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.74 65.0 4.19e-01 100.0% 23.7%
3461265 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.73 66.0 4.60e-01 100.0% 35.2%
3275165 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.72 62.0 4.67e-01 100.0% 43.9%
3254555 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.72 64.0 4.20e-01 100.0% 24.4%
3838073 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.71 44.0 3.94e-01 100.0% 43.0%
3257167 207.2.1.88 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29730 0.71 62.0 3.62e-01 100.0% 12.9%
3575994 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.71 52.0 5.03e-01 100.0% 70.7%
3286791 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.70 52.0 4.45e-01 100.0% 49.1%
4969960 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.70 50.0 4.51e-01 100.0% 54.7%
3391275 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.69 42.0 3.66e-01 100.0% 39.0%
5041137 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.68 45.0 4.47e-01 100.0% 65.7%
3716144 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.67 49.0 3.60e-01 77.9% 64.2%
4025775 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.66 44.0 3.80e-01 100.0% 41.7%
3335252 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.65 56.0 4.08e-01 98.5% 40.5%
3815417 207.1.1.100 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8+LRR_14 0.65 50.0 3.20e-01 100.0% 16.9%
3997590 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.63 41.0 4.25e-01 94.1% 75.0%
3572525 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.58 43.0 4.13e-01 100.0% 68.8%
3655839 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.57 43.0 3.29e-01 86.8% 53.3%
4935712 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.53 46.0 3.65e-01 100.0% 46.9%
3870521 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.53 42.0 4.11e-01 89.7% 89.3%
D6 medium residues 1093-1219
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.89 85.0 5.68e-01 100.0% 35.6%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.87 83.0 5.78e-01 100.0% 38.9%
1dbgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 81.0 5.25e-01 100.0% 37.6%
2inuA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.85 82.0 5.50e-01 100.0% 36.1%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 80.0 5.26e-01 100.0% 30.8%
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 80.0 6.42e-01 100.0% 68.1%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 80.0 5.57e-01 100.0% 37.6%
3vsvA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 80.0 5.12e-01 100.0% 31.8%
3jurA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 80.0 5.27e-01 100.0% 45.7%
3vmvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 79.0 5.67e-01 100.0% 41.7%
4oj6C03 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 79.0 5.37e-01 100.0% 43.5%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.83 60.0 5.15e-01 100.0% 49.2%
7dmkA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 78.0 5.77e-01 100.0% 46.5%
3eqnA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 79.0 5.46e-01 100.0% 55.8%
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 78.0 5.21e-01 100.0% 37.0%
5z9tA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 77.0 5.03e-01 100.0% 30.0%
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 78.0 5.20e-01 100.0% 32.0%
5olpA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 78.0 5.15e-01 100.0% 41.0%
1hg8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 77.0 5.42e-01 100.0% 40.7%
1bheA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 77.0 5.31e-01 100.0% 35.1%
1vblA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 77.0 5.17e-01 100.0% 39.9%
7b7aA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 77.0 5.29e-01 100.0% 34.8%
4hwvB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.81 77.0 4.96e-01 100.0% 37.6%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.80 61.0 5.63e-01 100.0% 63.3%
1pxzA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 76.0 5.36e-01 100.0% 39.3%
7o79A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 76.0 5.18e-01 100.0% 41.0%
1o88A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 76.0 5.33e-01 100.0% 39.2%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.80 76.0 4.81e-01 100.0% 32.7%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.80 76.0 4.80e-01 100.0% 31.9%
1k5cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 76.0 5.39e-01 100.0% 40.2%
1jtaA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 75.0 5.25e-01 100.0% 48.8%
2yuhA01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.78 54.0 4.82e-01 92.1% 51.7%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 69.0 5.83e-01 100.0% 60.4%
2w7zA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.76 57.0 4.82e-01 100.0% 48.3%
2bm5B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.76 58.0 5.09e-01 100.0% 56.1%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.75 52.0 5.90e-01 92.9% 92.8%
4pmhA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.74 70.0 4.88e-01 100.0% 52.5%
2f3lA00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.73 56.0 5.56e-01 100.0% 77.3%
3grhA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 68.0 4.69e-01 100.0% 42.8%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 67.0 4.80e-01 100.0% 46.8%
3ak5D02 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 57.0 3.58e-01 100.0% 17.1%
1igrA01 3.80.20.20 Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain 0.66 60.0 5.33e-01 100.0% 71.2%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.63 55.0 5.15e-01 98.4% 77.1%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044621 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 80.0 5.66e-01 100.0% 35.1%
5035024 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.92 78.0 6.29e-01 100.0% 50.9%
4944455 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 80.0 5.97e-01 100.0% 42.2%
5049174 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 81.0 5.74e-01 100.0% 35.7%
4970380 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 80.0 5.68e-01 100.0% 35.9%
4980562 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.91 80.0 5.54e-01 100.0% 32.9%
5035926 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 80.0 5.35e-01 100.0% 28.0%
5045771 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 80.0 5.63e-01 100.0% 34.1%
4969480 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.91 81.0 5.98e-01 100.0% 41.1%
5034020 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 81.0 6.17e-01 100.0% 45.9%
4940203 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 78.0 6.37e-01 100.0% 53.8%
5033179 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 78.0 5.66e-01 100.0% 37.7%
5027439 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 78.0 5.88e-01 100.0% 42.2%
4944883 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 80.0 5.27e-01 100.0% 26.7%
4980489 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.90 79.0 4.63e-01 100.0% 14.3%
4928776 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.90 80.0 5.66e-01 100.0% 35.6%
4957368 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 77.0 6.31e-01 100.0% 53.8%
4989914 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 78.0 5.24e-01 100.0% 28.9%
4942768 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 80.0 6.77e-01 100.0% 61.6%
5046701 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 80.0 5.09e-01 100.0% 22.7%
4994782 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.89 78.0 4.97e-01 100.0% 22.8%
5033524 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 81.0 5.83e-01 100.0% 38.7%
4941932 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 80.0 5.70e-01 100.0% 36.6%
5034985 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 78.0 6.59e-01 100.0% 60.5%
5060097 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 80.0 5.57e-01 100.0% 34.0%
5047058 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 75.0 5.11e-01 100.0% 29.6%
5033178 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 81.0 5.94e-01 100.0% 42.1%
5047146 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.88 78.0 6.74e-01 100.0% 63.2%
4969196 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 80.0 5.52e-01 100.0% 32.4%
5046331 207.2.1.33 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pel9A-like_beta_helix 0.88 85.0 5.63e-01 100.0% 33.8%
2491360 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 85.0 5.65e-01 100.0% 35.6%
5053458 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 82.0 6.13e-01 100.0% 44.7%
4944456 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 83.0 6.71e-01 100.0% 57.7%
5020032 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 78.0 5.72e-01 100.0% 39.7%
5034984 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 78.0 5.94e-01 100.0% 45.0%
4940415 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 75.0 5.47e-01 100.0% 38.0%
4970153 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.87 78.0 4.73e-01 100.0% 17.1%
4945262 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 77.0 6.15e-01 100.0% 50.9%
5082766 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.87 83.0 5.87e-01 100.0% 43.9%
4980180 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.87 77.0 5.53e-01 100.0% 37.4%
5061716 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.87 78.0 5.83e-01 100.0% 42.5%
5027061 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 77.0 4.80e-01 100.0% 20.9%
5078153 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 83.0 5.07e-01 100.0% 20.6%
5060184 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 78.0 6.15e-01 100.0% 50.6%
5040116 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.86 80.0 5.35e-01 100.0% 29.8%
5050079 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.86 79.0 6.20e-01 100.0% 51.1%
4969230 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.86 82.0 5.77e-01 100.0% 41.2%
5062382 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.85 76.0 5.89e-01 100.0% 47.8%
4969460 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.85 78.0 6.78e-01 100.0% 67.2%
5059872 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.85 76.0 5.18e-01 100.0% 31.1%
4980775 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.84 81.0 5.59e-01 100.0% 35.3%
5041302 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.84 81.0 5.45e-01 100.0% 32.8%
4981149 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.84 76.0 6.11e-01 100.0% 54.1%
5039544 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 81.0 6.35e-01 100.0% 55.7%
5018356 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 81.0 6.01e-01 100.0% 53.2%
4944416 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 81.0 5.35e-01 100.0% 30.6%
5041560 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 81.0 5.41e-01 100.0% 32.8%
4981314 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.84 80.0 5.15e-01 100.0% 26.0%
5040393 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.84 80.0 6.28e-01 100.0% 60.0%
3828319 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.84 80.0 5.25e-01 100.0% 36.9%
3435704 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.83 80.0 5.45e-01 100.0% 37.1%
4942185 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.83 80.0 5.19e-01 100.0% 28.5%
3256675 207.2.1.62 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › G8+CEMIP_beta-hel 0.83 79.0 5.16e-01 100.0% 42.5%
2433695 207.2.1.14 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 80.0 5.46e-01 100.0% 44.4%
4982113 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 78.0 6.04e-01 100.0% 50.6%
5039543 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.83 79.0 5.39e-01 100.0% 40.5%
4969572 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 80.0 5.37e-01 100.0% 34.7%
3804805 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.83 79.0 5.38e-01 100.0% 35.6%
1725727 207.2.1.27 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Phage_spike_2 0.82 78.0 5.00e-01 100.0% 30.8%
5027446 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.82 79.0 6.14e-01 100.0% 51.8%
4597622 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.82 79.0 5.80e-01 100.0% 45.4%
4987748 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 78.0 6.52e-01 100.0% 69.5%
4982268 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 77.0 5.33e-01 100.0% 39.5%
4955482 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.81 77.0 5.26e-01 100.0% 33.2%
4202478 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.81 77.0 5.55e-01 100.0% 48.6%
4981823 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 77.0 4.93e-01 100.0% 26.7%
4981294 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 76.0 6.71e-01 99.2% 80.0%
2491358 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 76.0 5.01e-01 100.0% 28.2%
7216 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.80 76.0 5.39e-01 100.0% 40.2%
5034971 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.79 76.0 6.03e-01 100.0% 60.9%
3717462 207.2.1.50 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DGF-1_beta-sheet 0.78 73.0 4.64e-01 100.0% 26.0%
5034202 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.78 75.0 5.74e-01 100.0% 49.8%
3373292 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.78 73.0 5.28e-01 100.0% 45.2%
3903674 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.69 50.0 4.08e-01 100.0% 41.7%
4102530 207.1.1.142 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8 0.67 55.0 4.85e-01 100.0% 59.5%
3425805 208.2.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain 0.64 43.0 4.44e-01 100.0% 72.5%
3421120 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.53 46.0 4.03e-01 99.2% 82.0%
D7 medium residues 1343-1378
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yueA02 2.10.10.40 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.72 59.0 5.12e-01 100.0% 91.8%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.71 54.0 4.36e-01 86.1% 43.1%
4maaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 57.0 3.77e-01 100.0% 27.6%
2rtsA00 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.69 57.0 4.67e-01 100.0% 58.9%
1wvvB01 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.69 57.0 5.35e-01 100.0% 87.5%
4n0qA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 57.0 3.84e-01 100.0% 27.3%
1aiwA00 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.68 56.0 4.84e-01 100.0% 82.3%
1goiB03 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.68 53.0 4.98e-01 100.0% 80.4%
3wx7A02 2.10.10.90 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.68 56.0 4.29e-01 100.0% 48.4%
1ed7A00 2.10.10.20 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 0.67 51.0 4.92e-01 94.4% 97.8%
2g5dA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.67 48.0 3.05e-01 80.6% 40.8%
3prbA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 49.0 4.78e-01 88.9% 90.9%
1r3eA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.63 52.0 4.11e-01 100.0% 86.9%
3fveA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 45.0 3.18e-01 97.2% 40.9%
4m9fA00 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 48.0 3.09e-01 97.2% 51.0%
6jn7A01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.60 47.0 3.10e-01 94.4% 83.4%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 46.0 3.10e-01 100.0% 48.3%
2q07A03 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.58 43.0 3.84e-01 97.2% 92.4%
2d29A02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.57 42.0 3.29e-01 100.0% 85.6%
2b9kA00 2.20.20.70 Mainly Beta › Single Sheet › Anthopleurin-A › 0.55 40.0 3.81e-01 80.6% 83.0%
4grhA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.54 40.0 2.36e-01 100.0% 84.2%
2mn5A00 3.30.30.140 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.53 39.0 3.72e-01 100.0% 96.4%
4pdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 39.0 3.00e-01 91.7% 85.9%
3aogA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 37.0 2.70e-01 100.0% 40.0%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1002430 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.72 59.0 5.12e-01 100.0% 91.8%
3972100 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.72 61.0 5.11e-01 100.0% 66.2%
4307941 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.70 58.0 5.05e-01 100.0% 93.2%
5026481 64.3.1.3 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 0.70 58.0 5.31e-01 100.0% 82.0%
4009007 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.70 56.0 5.23e-01 100.0% 90.0%
3971347 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.69 56.0 4.96e-01 100.0% 79.3%
4026053 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.69 51.0 5.01e-01 83.3% 87.5%
1291025 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.69 57.0 4.67e-01 100.0% 58.9%
1322863 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.68 55.0 5.16e-01 94.4% 95.7%
4398943 217.2.1.1 a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.68 53.0 4.33e-01 91.7% 49.3%
1694867 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.68 55.0 5.03e-01 100.0% 90.6%
1322862 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.68 56.0 5.22e-01 100.0% 95.8%
2389402 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.67 52.0 4.84e-01 100.0% 77.8%
3975892 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.66 53.0 4.82e-01 100.0% 98.2%
4444075 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.66 53.0 5.09e-01 97.2% 95.3%
2736861 64.3.1.1 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 0.63 49.0 4.29e-01 100.0% 67.2%
3934136 304.31.1.0 a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase 0.62 50.0 3.33e-01 100.0% 27.5%
3230589 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.62 49.0 3.11e-01 100.0% 53.2%
3333339 4.8.1.34 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_SEND1 0.60 41.0 3.49e-01 72.2% 46.2%
3516456 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.59 45.0 4.62e-01 88.9% 94.3%
3170251 4.1.1.170 beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.58 47.0 3.22e-01 97.2% 55.7%
3319859 3164.1.1.3 few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › DYW_deaminase 0.58 39.0 4.02e-01 77.8% 85.7%
3603079 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 45.0 3.02e-01 94.4% 35.0%
3816405 109.4.1.1383 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.58 43.0 2.43e-01 100.0% 7.2%
3802543 109.4.1.1267 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.57 43.0 2.45e-01 100.0% 7.5%
3825377 109.4.1.1291 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.56 43.0 2.38e-01 100.0% 6.6%
3518897 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.56 42.0 4.29e-01 91.7% 94.3%
3516455 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.55 41.0 4.15e-01 88.9% 91.4%
4938068 270.1.1.3 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › N_formyltrans_C 0.50 36.0 3.38e-01 80.6% 84.0%