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NC_007022.1__YP_238848.1__PHG31p119__00119

Bact-Vir

NC_007022.1__YP_238848.1__PHG31p119__00119

Identity

Accession:
NC_007022 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Biquartavirus› Aeromonas_phage_31

TaxID: 321023

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-79
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.80 74.0 5.91e-01 100.0% 66.9%
1r6bX05 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 45.0 4.25e-01 80.5% 85.9%
4ciuA04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.60 44.0 4.21e-01 80.5% 89.2%
1wlfA02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 35.0 3.51e-01 81.8% 60.0%
3o8oF01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 45.0 3.40e-01 100.0% 96.4%
3hheA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 36.0 3.64e-01 96.1% 69.2%
1l8rA00 3.10.260.20 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski 0.53 39.0 3.60e-01 79.2% 72.3%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 35.0 3.30e-01 70.1% 88.0%
1z7mC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 39.0 2.63e-01 84.4% 90.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
119462 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.80 74.0 5.93e-01 100.0% 66.9%
4979945 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.78 71.0 6.00e-01 100.0% 80.0%
3397473 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.71 63.0 5.49e-01 100.0% 70.0%
3489023 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.71 62.0 5.42e-01 100.0% 72.5%
3280234 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 37.0 2.56e-01 87.0% 20.0%
3244537 6060.1.1.1 ↗ alpha arrays › Yst0336-like › Yst0336-like › Yst0336-like › PBDC1 0.52 47.0 3.79e-01 100.0% 77.2%
3875547 2011.1.1.8 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 0.50 42.0 2.91e-01 100.0% 83.7%
3255592 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.50 40.0 3.86e-01 93.5% 74.4%
D2 high residues 96-154
PDB
Domain cluster: rep: MT968995.1__QOQ37500.1__vBEcoMWL3_gp123c__00122__D63-108