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NC_007623.1__YP_418098.1__PPEV_gp065__00065
Bact-VirNC_007623.1__YP_418098.1__PPEV_gp065__00065
Identity
- Accession:
- NC_007623 ↗
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Taxonomy
TaxID: 273133
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-53
Domain cluster:
representative
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 49.0 | 3.93e-01 | 100.0% | 37.8% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.69 | 52.0 | 4.98e-01 | 100.0% | 72.2% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 57.0 | 4.68e-01 | 100.0% | 52.7% |
| 3c5iD01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 57.0 | 4.94e-01 | 100.0% | 76.3% |
| 3pg7A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 55.0 | 4.26e-01 | 97.8% | 55.5% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.66 | 49.0 | 3.78e-01 | 100.0% | 36.3% |
| 2jh1A01 | 3.90.640.70 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.65 | 54.0 | 4.25e-01 | 100.0% | 81.5% |
| 1jqlA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.65 | 55.0 | 4.17e-01 | 100.0% | 89.1% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 54.0 | 3.22e-01 | 100.0% | 16.2% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 46.0 | 3.06e-01 | 78.3% | 20.6% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.65 | 54.0 | 4.55e-01 | 93.5% | 77.9% |
| 3b59A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.64 | 46.0 | 3.46e-01 | 100.0% | 29.8% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.64 | 49.0 | 2.84e-01 | 87.0% | 9.5% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 52.0 | 4.52e-01 | 91.3% | 66.2% |
| 3m2oA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.64 | 45.0 | 4.34e-01 | 100.0% | 66.0% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 54.0 | 4.12e-01 | 100.0% | 89.1% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 42.0 | 3.91e-01 | 78.3% | 50.0% |
| 2xanA01 | 3.30.200.110 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe | 0.64 | 46.0 | 3.33e-01 | 80.4% | 28.7% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 55.0 | 4.02e-01 | 100.0% | 72.7% |
| 3ct8A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.63 | 44.0 | 3.23e-01 | 95.7% | 26.3% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 53.0 | 4.05e-01 | 97.8% | 56.0% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.63 | 42.0 | 3.37e-01 | 100.0% | 33.7% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 4.54e-01 | 100.0% | 81.2% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.62 | 52.0 | 3.70e-01 | 97.8% | 31.4% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 4.42e-01 | 100.0% | 69.6% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.62 | 45.0 | 4.28e-01 | 84.8% | 65.5% |
| 1h4rA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 49.0 | 4.12e-01 | 97.8% | 64.8% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.62 | 44.0 | 4.03e-01 | 100.0% | 56.1% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.15e-01 | 97.8% | 59.1% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.27e-01 | 100.0% | 59.2% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 45.0 | 2.93e-01 | 82.6% | 18.0% |
| 2r61A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 42.0 | 3.69e-01 | 76.1% | 46.6% |
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 48.0 | 4.09e-01 | 97.8% | 62.9% |
| 1tj6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 3.83e-01 | 100.0% | 83.5% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.60 | 47.0 | 4.19e-01 | 91.3% | 64.8% |
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 41.0 | 3.16e-01 | 78.3% | 29.3% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 44.0 | 2.47e-01 | 84.8% | 6.2% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.58 | 50.0 | 2.91e-01 | 100.0% | 21.8% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 42.0 | 2.79e-01 | 80.4% | 67.8% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 41.0 | 3.25e-01 | 78.3% | 44.6% |
| 3lw3B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 50.0 | 3.59e-01 | 100.0% | 82.5% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.58 | 40.0 | 3.05e-01 | 76.1% | 46.0% |
| 1nr0A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 45.0 | 2.87e-01 | 100.0% | 20.2% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 50.0 | 3.17e-01 | 100.0% | 58.5% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 47.0 | 3.12e-01 | 100.0% | 58.1% |
| 2v6eA03 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.56 | 44.0 | 2.97e-01 | 97.8% | 24.4% |
| 4nsxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 2.77e-01 | 100.0% | 19.5% |
| 1vqwA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 47.0 | 2.89e-01 | 100.0% | 46.9% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 4.50e-01 | 100.0% | 97.9% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 40.0 | 3.31e-01 | 80.4% | 39.6% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 46.0 | 3.61e-01 | 100.0% | 93.8% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.56 | 47.0 | 2.75e-01 | 100.0% | 22.6% |
| 2kymA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 45.0 | 3.75e-01 | 100.0% | 53.8% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.56 | 49.0 | 4.21e-01 | 100.0% | 88.0% |
| 3ayjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 40.0 | 2.49e-01 | 93.5% | 72.6% |
| 2qdsA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 43.0 | 2.85e-01 | 95.7% | 58.9% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 3.41e-01 | 100.0% | 69.4% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 42.0 | 3.94e-01 | 100.0% | 81.2% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 45.0 | 3.06e-01 | 100.0% | 88.0% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250994 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 52.0 | 4.63e-01 | 73.9% | 47.7% |
| 5027607 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.72 | 54.0 | 4.61e-01 | 97.8% | 50.7% |
| 3880677 | 2.1.1.251 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_HELZ2 | 0.72 | 48.0 | 3.94e-01 | 73.9% | 37.6% |
| 3275983 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.71 | 49.0 | 3.01e-01 | 73.9% | 11.7% |
| 3484357 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.70 | 59.0 | 4.46e-01 | 95.7% | 54.5% |
| 5000308 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 53.0 | 5.22e-01 | 100.0% | 79.6% |
| 3578390 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 50.0 | 3.30e-01 | 78.3% | 25.3% |
| 5061254 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 47.0 | 2.88e-01 | 80.4% | 10.8% |
| 3235400 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.69 | 59.0 | 4.77e-01 | 97.8% | 60.7% |
| 4059525 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.68 | 48.0 | 3.75e-01 | 73.9% | 37.9% |
| 3550644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 51.0 | 4.89e-01 | 100.0% | 70.9% |
| 3363253 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.67 | 51.0 | 3.08e-01 | 87.0% | 45.7% |
| 3603357 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 46.0 | 4.43e-01 | 100.0% | 61.8% |
| 4068978 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.66 | 47.0 | 4.01e-01 | 95.7% | 46.7% |
| 3992514 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 43.0 | 4.48e-01 | 95.7% | 77.5% |
| 5055849 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.65 | 47.0 | 4.25e-01 | 97.8% | 55.4% |
| 3398496 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.65 | 48.0 | 4.65e-01 | 100.0% | 70.9% |
| 4942953 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.65 | 45.0 | 3.65e-01 | 76.1% | 36.8% |
| 3921879 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 54.0 | 3.74e-01 | 95.7% | 35.6% |
| 3934192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 55.0 | 5.07e-01 | 100.0% | 75.0% |
| 3797608 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 54.0 | 4.15e-01 | 95.7% | 73.6% |
| 3960776 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 42.0 | 3.74e-01 | 95.7% | 44.3% |
| 3838036 | 4071.1.1.1 ↗ | beta barrels › BH3618-like › BH3618-like › BH3618-like › FliW | 0.64 | 54.0 | 3.93e-01 | 100.0% | 33.8% |
| 3504193 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.63 | 52.0 | 3.89e-01 | 97.8% | 58.5% |
| 3828860 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.63 | 53.0 | 3.12e-01 | 100.0% | 31.1% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 4.83e-01 | 100.0% | 75.0% |
| 4085772 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.63 | 50.0 | 4.30e-01 | 89.1% | 62.7% |
| 1177147 | 220.1.1.41 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sharpin_PH | 0.63 | 53.0 | 4.04e-01 | 97.8% | 55.6% |
| 4023722 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 55.0 | 3.19e-01 | 100.0% | 22.6% |
| 3908855 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 45.0 | 4.35e-01 | 100.0% | 67.3% |
| 2048176 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 55.0 | 3.77e-01 | 100.0% | 62.0% |
| 3196827 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.62 | 50.0 | 4.40e-01 | 93.5% | 58.7% |
| 4783165 | 5.1.3.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › CyRPA | 0.62 | 52.0 | 3.63e-01 | 100.0% | 38.8% |
| 4149829 | 220.1.1.114 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF5673 | 0.62 | 49.0 | 4.33e-01 | 97.8% | 58.7% |
| 4159666 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.62 | 46.0 | 3.60e-01 | 87.0% | 35.8% |
| 4107506 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.62 | 46.0 | 4.21e-01 | 87.0% | 60.0% |
| 3231448 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.62 | 50.0 | 3.53e-01 | 97.8% | 32.1% |
| 4162061 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.61 | 50.0 | 3.86e-01 | 100.0% | 88.6% |
| 4127839 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.61 | 46.0 | 4.00e-01 | 87.0% | 52.0% |
| 5078248 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.61 | 44.0 | 3.90e-01 | 78.3% | 51.4% |
| 4874139 | 186.1.1.27 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › ResT-TelK_cat | 0.60 | 52.0 | 4.11e-01 | 100.0% | 46.4% |
| 4508199 | 220.1.1.242 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EbsA | 0.60 | 49.0 | 4.38e-01 | 95.7% | 78.6% |
| None | — | 0.60 | 49.0 | 2.99e-01 | 100.0% | 29.1% | |
| 3617998 | 2003.1.10.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Synapsin | 0.60 | 48.0 | 3.75e-01 | 93.5% | 79.1% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.60 | 45.0 | 3.29e-01 | 100.0% | 26.7% |
| 3784757 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 52.0 | 2.95e-01 | 100.0% | 19.6% |
| 4964236 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.59 | 50.0 | 3.94e-01 | 100.0% | 44.0% |
| 2029624 | 1148.1.1.1 ↗ | a+b two layers › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cwp8_D2 | 0.59 | 49.0 | 4.06e-01 | 100.0% | 52.4% |
| 3591480 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.58 | 45.0 | 2.92e-01 | 93.5% | 100.0% |
| 3236929 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 44.0 | 3.02e-01 | 93.5% | 36.1% |
| 3931379 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 4.43e-01 | 100.0% | 83.6% |
| 3252112 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 46.0 | 3.58e-01 | 100.0% | 74.2% |
| 5044394 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 43.0 | 4.34e-01 | 89.1% | 95.6% |
| 4810374 | 3740.1.1.1 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C | 0.56 | 44.0 | 2.91e-01 | 100.0% | 54.5% |
| 3511696 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 40.0 | 3.63e-01 | 100.0% | 52.9% |
| 4280539 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.56 | 44.0 | 2.45e-01 | 100.0% | 7.8% |
| 4003473 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 3.57e-01 | 84.8% | 53.8% |
| 4002646 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 44.0 | 2.88e-01 | 100.0% | 18.1% |
| 3964664 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.55 | 42.0 | 3.81e-01 | 84.8% | 57.4% |
| 4931002 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 40.0 | 3.46e-01 | 87.0% | 55.4% |
| 3918166 | 7579.1.1.58 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF829 | 0.53 | 46.0 | 2.84e-01 | 100.0% | 24.8% |
| 5078685 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.52 | 40.0 | 3.56e-01 | 100.0% | 77.5% |
| 4423214 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 42.0 | 3.32e-01 | 95.7% | 54.3% |
| 3472863 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.51 | 40.0 | 3.21e-01 | 100.0% | 82.2% |
| 4977260 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 38.0 | 2.70e-01 | 95.7% | 23.9% |
| 1189110 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 44.0 | 3.02e-01 | 100.0% | 87.9% |
| 3256387 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.50 | 38.0 | 2.85e-01 | 95.7% | 35.5% |
D2
high
residues 58-159
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aujD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.65 | 27.0 | 3.38e-01 | 79.4% | 62.9% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 31.0 | 3.57e-01 | 95.1% | 62.2% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.63 | 28.0 | 3.81e-01 | 100.0% | 82.4% |
| 1rl1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 32.0 | 3.33e-01 | 100.0% | 59.8% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 32.0 | 3.33e-01 | 100.0% | 59.8% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 29.0 | 3.35e-01 | 98.0% | 74.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4986345 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.60 | 35.0 | 3.81e-01 | 99.0% | 69.4% |
| 5063608 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.59 | 33.0 | 3.47e-01 | 100.0% | 60.7% |
| 4432262 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.58 | 33.0 | 3.18e-01 | 100.0% | 46.7% |
| 3481737 | 4126.1.1.1 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › Pro_CA | 0.55 | 39.0 | 2.96e-01 | 74.5% | 71.6% |
| 1176501 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 31.0 | 3.40e-01 | 96.1% | 66.3% |
| 3488710 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.54 | 33.0 | 3.54e-01 | 98.0% | 70.0% |
| 3279508 | 283.1.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE | 0.52 | 34.0 | 3.17e-01 | 100.0% | 51.1% |
| 3509551 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 30.0 | 3.26e-01 | 99.0% | 68.2% |