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NC_007623.1__YP_418178.1__PPEV_gp145__00145

Bact-Vir

NC_007623.1__YP_418178.1__PPEV_gp145__00145

Identity

Accession:
NC_007623 ↗
Kingdom:
phage

Quality

64.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Elvirus› Pseudomonas_phage_EL

TaxID: 273133

Cluster

View cluster (11 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-80_192-211
PDB
D2 medium residues 81-191
PDB
Domain cluster: rep: OM810292.1__UOX39469.1__X__00024__D68-178
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrdC02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.57 39.0 3.93e-01 70.3% 86.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 40.0 3.40e-01 72.1% 84.7%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.56 39.0 3.62e-01 77.5% 58.0%
2kgyA00 3.30.505.20 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › 0.56 34.0 3.71e-01 86.5% 73.9%
4h5uA00 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.55 48.0 3.62e-01 100.0% 90.1%
2e1qC05 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.55 38.0 3.78e-01 71.2% 86.4%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.55 36.0 3.12e-01 70.3% 42.4%
1jlcB03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 36.0 3.39e-01 99.1% 58.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 39.0 2.92e-01 98.2% 32.3%
1cx8A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 44.0 3.35e-01 99.1% 94.1%
3fcyA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 42.0 3.14e-01 91.9% 78.9%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 43.0 3.17e-01 94.6% 77.7%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4074424 3747.1.1.2 ↗ a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C 0.66 49.0 5.20e-01 100.0% 87.0%
3889040 210.1.4.1 ↗ a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 0.57 48.0 3.41e-01 96.4% 90.9%
4207211 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.52 39.0 3.49e-01 78.4% 69.7%
3871823 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.52 45.0 2.94e-01 96.4% 26.5%
3697385 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.52 47.0 3.13e-01 100.0% 32.1%
4013459 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 47.0 3.16e-01 100.0% 33.4%
4500042 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 46.0 3.04e-01 99.1% 28.9%
3777742 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 45.0 3.07e-01 96.4% 33.8%
3789363 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 46.0 3.08e-01 99.1% 31.4%
3190705 2004.1.1.433 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.51 45.0 2.82e-01 97.3% 22.5%