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NC_007623.1__YP_418183.1__PPEV_gp150__00150
Bact-VirNC_007623.1__YP_418183.1__PPEV_gp150__00150
Identity
- Accession:
- NC_007623 ↗
- Kingdom:
- phage
Quality
58.4
mean pLDDT
Taxonomy
TaxID: 273133
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-88
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.71 | 39.0 | 4.57e-01 | 98.9% | 77.0% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.66 | 35.0 | 3.81e-01 | 82.8% | 61.1% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 3.62e-01 | 90.8% | 44.9% |
| 2z0fA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.62 | 44.0 | 4.15e-01 | 81.6% | 61.8% |
| 8bddA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 50.0 | 3.26e-01 | 87.4% | 57.8% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.61 | 50.0 | 4.13e-01 | 89.7% | 57.4% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 49.0 | 4.00e-01 | 88.5% | 55.6% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.60 | 54.0 | 3.98e-01 | 100.0% | 50.4% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 42.0 | 4.26e-01 | 88.5% | 77.4% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 32.0 | 3.23e-01 | 100.0% | 50.0% |
| 1reoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 40.0 | 3.36e-01 | 71.3% | 52.0% |
| 2plgA01 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 42.0 | 3.66e-01 | 80.5% | 93.2% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.55 | 36.0 | 3.81e-01 | 100.0% | 73.8% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.55 | 46.0 | 3.46e-01 | 98.9% | 94.1% |
| 3dxpA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 40.0 | 3.97e-01 | 77.0% | 100.0% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 48.0 | 3.28e-01 | 100.0% | 83.9% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 42.0 | 3.73e-01 | 100.0% | 56.7% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.54 | 42.0 | 3.59e-01 | 82.8% | 80.7% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 41.0 | 3.67e-01 | 97.7% | 58.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3233897 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 43.0 | 3.81e-01 | 100.0% | 36.7% |
| 3250807 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.77 | 44.0 | 3.26e-01 | 90.8% | 25.0% |
| 3984091 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.72 | 40.0 | 3.76e-01 | 100.0% | 45.7% |
| 1099437 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.70 | 40.0 | 4.43e-01 | 100.0% | 70.0% |
| 1238188 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.68 | 34.0 | 4.55e-01 | 86.2% | 91.5% |
| 3697524 | 9.2.1.7 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970 | 0.67 | 46.0 | 4.60e-01 | 100.0% | 68.9% |
| 3717742 | 5.1.4.422 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Rol-3 | 0.66 | 57.0 | 3.34e-01 | 96.6% | 24.3% |
| 3784883 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 50.0 | 3.40e-01 | 82.8% | 26.2% |
| 4964966 | 3504.3.1.1 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N | 0.64 | 58.0 | 4.76e-01 | 100.0% | 76.1% |
| 1171964 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.64 | 41.0 | 4.89e-01 | 98.9% | 100.0% |
| 5035423 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.63 | 41.0 | 4.20e-01 | 100.0% | 68.2% |
| 3242101 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.63 | 54.0 | 3.23e-01 | 94.3% | 18.8% |
| 4000086 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.63 | 53.0 | 3.02e-01 | 94.3% | 9.1% |
| 3478270 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.62 | 54.0 | 3.36e-01 | 96.6% | 60.4% |
| 3388732 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.62 | 37.0 | 3.74e-01 | 83.9% | 58.8% |
| 3875861 | 5.1.4.146 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 54.0 | 3.42e-01 | 96.6% | 21.5% |
| 3575893 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.60 | 42.0 | 4.11e-01 | 87.4% | 66.3% |
| 3870352 | 5.1.5.109 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_WDR90_POC16_2nd | 0.60 | 53.0 | 3.48e-01 | 96.6% | 33.2% |
| 3739528 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.59 | 52.0 | 3.90e-01 | 95.4% | 60.0% |
| 5056757 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.59 | 49.0 | 4.33e-01 | 89.7% | 89.6% |
| 5046585 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.59 | 34.0 | 3.84e-01 | 87.4% | 75.4% |
| 4108467 | 3459.1.1.1 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 | 0.57 | 40.0 | 4.11e-01 | 88.5% | 76.5% |
| 3590243 | 6044.1.1.1 ↗ | a+b three layers › DUF1827-like › DUF1827-like › DUF1827-like › DUF1827 | 0.57 | 51.0 | 4.80e-01 | 96.6% | 100.0% |
| 3211395 | 5.1.4.102 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 | 0.56 | 50.0 | 3.47e-01 | 100.0% | 86.9% |
| 4958283 | 12.2.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain | 0.54 | 44.0 | 4.06e-01 | 92.0% | 93.2% |
| 3577464 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.53 | 47.0 | 3.25e-01 | 100.0% | 70.6% |
| 3777481 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.53 | 41.0 | 3.50e-01 | 82.8% | 86.4% |
D2
high
residues 93-191